RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 ARAP1Q96P48 1450 aa12.83□□□□□ -0.36
COL25A1-209ENST00000622134 SLC26A8Q96RN1 970 aa12.83□□□□□ -0.36
COL25A1-209ENST00000622134 ZMYND15Q9H091 742 aa12.83□□□□□ -0.36
COL25A1-209ENST00000622134 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.82□□□□□ -0.36
COL25A1-209ENST00000622134 KIAA1107Q9UPP5 1409 aa12.82□□□□□ -0.36
COL25A1-209ENST00000622134 HTATSF1O43719 755 aaKnown RBP12.82□□□□□ -0.36
COL25A1-209ENST00000622134 SPG7Q9UQ90 795 aa12.82□□□□□ -0.36
COL25A1-209ENST00000622134 FANCAO15360 1455 aa12.82□□□□□ -0.36
COL25A1-209ENST00000622134 GNAI1P63096 354 aa12.82□□□□□ -0.36
COL25A1-209ENST00000622134 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
COL25A1-209ENST00000622134 API5Q9BZZ5 524 aaKnown RBP12.82□□□□□ -0.36
COL25A1-209ENST00000622134 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
COL25A1-209ENST00000622134 CFAP70Q5T0N1 1121 aa12.81□□□□□ -0.36
COL25A1-209ENST00000622134 TMEM132EQ6IEE7 984 aa12.81□□□□□ -0.36
COL25A1-209ENST00000622134 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
COL25A1-209ENST00000622134 E9PSI1 815 aa12.81□□□□□ -0.36
COL25A1-209ENST00000622134 STRN4Q9NRL3 753 aa12.81□□□□□ -0.36
COL25A1-209ENST00000622134 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
COL25A1-209ENST00000622134 MFAP1P55081 439 aaKnown RBP12.8□□□□□ -0.36
COL25A1-209ENST00000622134 PNISRQ8TF01 805 aaKnown RBP12.8□□□□□ -0.36
COL25A1-209ENST00000622134 KIF3AQ9Y496 699 aa12.8□□□□□ -0.36
COL25A1-209ENST00000622134 CCDC66A2RUB6 948 aa12.79□□□□□ -0.36
COL25A1-209ENST00000622134 VPS37DQ86XT2 251 aa12.79□□□□□ -0.36
COL25A1-209ENST00000622134 CTDP1Q9Y5B0 961 aaPredicted RBP12.79□□□□□ -0.36
COL25A1-209ENST00000622134 ERBINQ96RT1 1412 aa12.79□□□□□ -0.36
COL25A1-209ENST00000622134 CABP2Q9NPB3 220 aa12.79□□□□□ -0.36
COL25A1-209ENST00000622134 TULP1O00294 542 aaPredicted RBP12.79□□□□□ -0.36
COL25A1-209ENST00000622134 TPRNQ4KMQ1 711 aa12.79□□□□□ -0.36
COL25A1-209ENST00000622134 ARHGEF11O15085 1522 aa12.79□□□□□ -0.36
COL25A1-209ENST00000622134 HSP90AB4PQ58FF6 505 aa12.78□□□□□ -0.36
COL25A1-209ENST00000622134 TAF3Q5VWG9 929 aa12.77□□□□□ -0.36
COL25A1-209ENST00000622134 PDCL3Q9H2J4 239 aa12.77□□□□□ -0.36
COL25A1-209ENST00000622134 R3HCC1Q9Y3T6 440 aaKnown RBP12.77□□□□□ -0.36
COL25A1-209ENST00000622134 APBB1O00213 710 aa12.77□□□□□ -0.36
COL25A1-209ENST00000622134 BACH2Q9BYV9 841 aa12.77□□□□□ -0.36
COL25A1-209ENST00000622134 EIF2S2P20042 333 aaKnown RBP12.77□□□□□ -0.37
COL25A1-209ENST00000622134 RUNDC1Q96C34 613 aa12.77□□□□□ -0.37
COL25A1-209ENST00000622134 GOLGA6L1Q8N7Z2 621 aa12.76□□□□□ -0.37
COL25A1-209ENST00000622134 CDK19Q9BWU1 502 aa12.76□□□□□ -0.37
COL25A1-209ENST00000622134 TSPYL4Q9UJ04 414 aa12.76□□□□□ -0.37
COL25A1-209ENST00000622134 CCDC61Q9Y6R9 512 aa12.76□□□□□ -0.37
COL25A1-209ENST00000622134 ASXL2Q76L83 1435 aa12.76□□□□□ -0.37
COL25A1-209ENST00000622134 TNRQ92752 1358 aa12.76□□□□□ -0.37
COL25A1-209ENST00000622134 KIF6Q6ZMV9 814 aa12.76□□□□□ -0.37
COL25A1-209ENST00000622134 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
COL25A1-209ENST00000622134 TIAM1Q13009 1591 aa12.75□□□□□ -0.37
COL25A1-209ENST00000622134 UNC13AQ9UPW8 1703 aa12.75□□□□□ -0.37
COL25A1-209ENST00000622134 RIPK4P57078 832 aa12.75□□□□□ -0.37
COL25A1-209ENST00000622134 CCDC173Q0VFZ6 552 aa12.75□□□□□ -0.37
COL25A1-209ENST00000622134 NUTM2GQ5VZR2 741 aa12.75□□□□□ -0.37
COL25A1-209ENST00000622134 DHX29Q7Z478 1369 aaKnown RBP12.75□□□□□ -0.37
COL25A1-209ENST00000622134 FAM135AQ9P2D6 1515 aa12.75□□□□□ -0.37
COL25A1-209ENST00000622134 C11orf95C9JLR9 678 aaPredicted RBP12.74□□□□□ -0.37
COL25A1-209ENST00000622134 HMGN5P82970 282 aaKnown RBP12.74□□□□□ -0.37
COL25A1-209ENST00000622134 CRBNQ96SW2 442 aa12.74□□□□□ -0.37
COL25A1-209ENST00000622134 ZKSCAN2Q63HK3 967 aa12.74□□□□□ -0.37
COL25A1-209ENST00000622134 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
COL25A1-209ENST00000622134 MSH6P52701 1360 aa12.74□□□□□ -0.37
COL25A1-209ENST00000622134 ESPNB1AK53 854 aa12.74□□□□□ -0.37
COL25A1-209ENST00000622134 CNTLNQ9NXG0 1405 aa12.74□□□□□ -0.37
COL25A1-209ENST00000622134 CDK13Q14004 1512 aaKnown RBP12.74□□□□□ -0.37
COL25A1-209ENST00000622134 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
COL25A1-209ENST00000622134 CLSTN1O94985 981 aa12.73□□□□□ -0.37
COL25A1-209ENST00000622134 TEX35Q5T0J7 233 aa12.73□□□□□ -0.37
COL25A1-209ENST00000622134 TOMM22Q9NS69 142 aa12.73□□□□□ -0.37
COL25A1-209ENST00000622134 TAOK2Q9UL54 1235 aa12.73□□□□□ -0.37
COL25A1-209ENST00000622134 DIAPH3Q9NSV4 1193 aa12.73□□□□□ -0.37
COL25A1-209ENST00000622134 TRAK2O60296 914 aa12.73□□□□□ -0.37
COL25A1-209ENST00000622134 NASPP49321 788 aaPredicted RBP12.73□□□□□ -0.37
COL25A1-209ENST00000622134 RIC3Q7Z5B4 369 aa12.73□□□□□ -0.37
COL25A1-209ENST00000622134 CWC22Q9HCG8 908 aaKnown RBP12.73□□□□□ -0.37
COL25A1-209ENST00000622134 CCDC39Q9UFE4 941 aa12.73□□□□□ -0.37
COL25A1-209ENST00000622134 WDR7Q9Y4E6 1490 aa12.72□□□□□ -0.37
COL25A1-209ENST00000622134 UBAP1LF5GYI3 381 aa12.72□□□□□ -0.37
COL25A1-209ENST00000622134 CABP4P57796 275 aa12.72□□□□□ -0.37
COL25A1-209ENST00000622134 G3BP1Q13283 466 aaKnown RBP eCLIP12.72□□□□□ -0.37
COL25A1-209ENST00000622134 NGLY1Q96IV0 654 aa12.72□□□□□ -0.37
COL25A1-209ENST00000622134 SETQ01105 290 aaPredicted RBP12.71□□□□□ -0.37
COL25A1-209ENST00000622134 RUFY2Q8WXA3 655 aa12.71□□□□□ -0.37
COL25A1-209ENST00000622134 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
COL25A1-209ENST00000622134 KIF16BQ96L93 1317 aa12.71□□□□□ -0.37
COL25A1-209ENST00000622134 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.37
COL25A1-209ENST00000622134 CPLX2Q6PUV4 134 aaKnown RBP12.71□□□□□ -0.37
COL25A1-209ENST00000622134 SYNE3Q6ZMZ3 975 aa12.71□□□□□ -0.38
COL25A1-209ENST00000622134 PHF8Q9UPP1 1060 aa12.71□□□□□ -0.38
COL25A1-209ENST00000622134 CAMSAP2Q08AD1 1489 aa12.7□□□□□ -0.38
COL25A1-209ENST00000622134 ZNF518AQ6AHZ1 1483 aa12.7□□□□□ -0.38
COL25A1-209ENST00000622134 GPS2Q13227 327 aa12.7□□□□□ -0.38
COL25A1-209ENST00000622134 BIVM-ERCC5R4GMW8 1640 aa12.7□□□□□ -0.38
COL25A1-209ENST00000622134 PLCH2O75038 1416 aa12.7□□□□□ -0.38
COL25A1-209ENST00000622134 ST18O60284 1047 aa12.7□□□□□ -0.38
COL25A1-209ENST00000622134 MAP3K1Q13233 1512 aa12.7□□□□□ -0.38
COL25A1-209ENST00000622134 AMOTL2Q9Y2J4 779 aa12.69□□□□□ -0.38
COL25A1-209ENST00000622134 APPP05067 770 aa12.69□□□□□ -0.38
COL25A1-209ENST00000622134 CCDC30Q5VVM6 783 aa12.69□□□□□ -0.38
COL25A1-209ENST00000622134 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
COL25A1-209ENST00000622134 MARCH6O60337 910 aa12.68□□□□□ -0.38
COL25A1-209ENST00000622134 RBM10P98175 930 aaKnown RBP12.68□□□□□ -0.38
COL25A1-209ENST00000622134 AKAP17AQ02040 695 aaKnown RBP12.68□□□□□ -0.38
COL25A1-209ENST00000622134 CABP1Q9NZU7 370 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms