RNA–Protein interactions for RNA: ENST00000619009.4

BARD1-213, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 3,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-213ENST00000619009 U2AF1Q01081 240 aaKnown RBP eCLIP12.29□□□□□ -0.44
BARD1-213ENST00000619009 TNNQ9UQP3 1299 aa12.29□□□□□ -0.44
BARD1-213ENST00000619009 DISP3Q9P2K9 1392 aa12.29□□□□□ -0.44
BARD1-213ENST00000619009 E9PCH4 1651 aa12.28□□□□□ -0.44
BARD1-213ENST00000619009 POGZQ7Z3K3 1410 aa12.28□□□□□ -0.44
BARD1-213ENST00000619009 PREX2Q70Z35 1606 aa12.28□□□□□ -0.44
BARD1-213ENST00000619009 NGDNQ8NEJ9 315 aaKnown RBP12.28□□□□□ -0.44
BARD1-213ENST00000619009 CABP1Q9NZU7 370 aa12.28□□□□□ -0.44
BARD1-213ENST00000619009 EVC2Q86UK5 1308 aa12.28□□□□□ -0.44
BARD1-213ENST00000619009 SHROOM2Q13796 1616 aa12.27□□□□□ -0.44
BARD1-213ENST00000619009 GOLGA6L3A6NEY3 463 aa12.27□□□□□ -0.44
BARD1-213ENST00000619009 HDGFL2Q7Z4V5 671 aaPredicted RBP12.27□□□□□ -0.44
BARD1-213ENST00000619009 RRP9O43818 475 aaKnown RBP12.27□□□□□ -0.45
BARD1-213ENST00000619009 PANK1Q8TE04 598 aa12.27□□□□□ -0.45
BARD1-213ENST00000619009 APAF1O14727 1248 aa12.26□□□□□ -0.45
BARD1-213ENST00000619009 GAS2L3Q86XJ1 694 aa12.26□□□□□ -0.45
BARD1-213ENST00000619009 LTV1Q96GA3 475 aaPredicted RBP12.26□□□□□ -0.45
BARD1-213ENST00000619009 COG6Q9Y2V7 657 aa12.26□□□□□ -0.45
BARD1-213ENST00000619009 ABCC1P33527 1531 aa12.26□□□□□ -0.45
BARD1-213ENST00000619009 TRIM44Q96DX7 344 aaPredicted RBP12.26□□□□□ -0.45
BARD1-213ENST00000619009 NCKAP5LQ9HCH0 1330 aa12.26□□□□□ -0.45
BARD1-213ENST00000619009 RALGAPBQ86X10 1494 aa12.26□□□□□ -0.45
BARD1-213ENST00000619009 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
BARD1-213ENST00000619009 ZMYM4Q5VZL5 1548 aa12.25□□□□□ -0.45
BARD1-213ENST00000619009 CDK19Q9BWU1 502 aa12.25□□□□□ -0.45
BARD1-213ENST00000619009 RTEL1-TNFRSF6BF6WH68 1400 aa12.25□□□□□ -0.45
BARD1-213ENST00000619009 ZNF521Q96K83 1311 aa12.24□□□□□ -0.45
BARD1-213ENST00000619009 PLA2R1Q13018 1463 aa12.24□□□□□ -0.45
BARD1-213ENST00000619009 ARID3AQ99856 593 aa12.24□□□□□ -0.45
BARD1-213ENST00000619009 MCM4P33991 863 aa12.24□□□□□ -0.45
BARD1-213ENST00000619009 TESK2Q96S53 571 aa12.24□□□□□ -0.45
BARD1-213ENST00000619009 PODXL2Q9NZ53 605 aa12.24□□□□□ -0.45
BARD1-213ENST00000619009 TERF2IPQ9NYB0 399 aa12.23□□□□□ -0.45
BARD1-213ENST00000619009 PRAG1Q86YV5 1406 aa12.23□□□□□ -0.45
BARD1-213ENST00000619009 XPCQ01831 940 aaPredicted RBP12.23□□□□□ -0.45
BARD1-213ENST00000619009 CLUAP1Q96AJ1 413 aa12.23□□□□□ -0.45
BARD1-213ENST00000619009 A0A0G2JS52 829 aa12.23□□□□□ -0.45
BARD1-213ENST00000619009 NPATQ14207 1427 aa12.23□□□□□ -0.45
BARD1-213ENST00000619009 RBM10P98175 930 aaKnown RBP12.22□□□□□ -0.45
BARD1-213ENST00000619009 RIMBP3CA6NJZ7 1639 aa12.22□□□□□ -0.45
BARD1-213ENST00000619009 RIMBP3BA6NNM3 1639 aa12.22□□□□□ -0.45
BARD1-213ENST00000619009 RIMBP3Q9UFD9 1639 aa12.22□□□□□ -0.45
BARD1-213ENST00000619009 ESPNB1AK53 854 aa12.22□□□□□ -0.45
BARD1-213ENST00000619009 TRAK2O60296 914 aa12.22□□□□□ -0.45
BARD1-213ENST00000619009 C14orf93Q9H972 538 aaKnown RBP12.22□□□□□ -0.45
BARD1-213ENST00000619009 ARHGEF5Q12774 1597 aa12.22□□□□□ -0.45
BARD1-213ENST00000619009 ZMYM3Q14202 1370 aa12.22□□□□□ -0.45
BARD1-213ENST00000619009 UHRF1BP1Q6BDS2 1440 aa12.21□□□□□ -0.45
BARD1-213ENST00000619009 HSPA2P54652 639 aa12.21□□□□□ -0.45
BARD1-213ENST00000619009 MAPK8IP3Q9UPT6 1336 aa12.21□□□□□ -0.45
BARD1-213ENST00000619009 A0A0U1RQG5 324 aaPredicted RBP12.21□□□□□ -0.46
BARD1-213ENST00000619009 PPP2R1AP30153 589 aa12.21□□□□□ -0.46
BARD1-213ENST00000619009 MTHFSP49914 203 aa12.21□□□□□ -0.46
BARD1-213ENST00000619009 BCL2L13Q9BXK5 485 aa12.21□□□□□ -0.46
BARD1-213ENST00000619009 SLFN5Q08AF3 891 aa12.2□□□□□ -0.46
BARD1-213ENST00000619009 PCDHB15Q9Y5E8 787 aa12.2□□□□□ -0.46
BARD1-213ENST00000619009 MFAP1P55081 439 aaKnown RBP12.2□□□□□ -0.46
BARD1-213ENST00000619009 TBC1D32Q96NH3 1257 aa12.2□□□□□ -0.46
BARD1-213ENST00000619009 HAP1P54257 671 aaPredicted RBP12.2□□□□□ -0.46
BARD1-213ENST00000619009 THEMISQ8N1K5 641 aaPredicted RBP12.2□□□□□ -0.46
BARD1-213ENST00000619009 ANP32BQ92688 251 aaKnown RBP12.2□□□□□ -0.46
BARD1-213ENST00000619009 RLBP1P12271 317 aa12.19□□□□□ -0.46
BARD1-213ENST00000619009 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.19□□□□□ -0.46
BARD1-213ENST00000619009 GRPEL1Q9HAV7 217 aa12.19□□□□□ -0.46
BARD1-213ENST00000619009 PRDM4Q9UKN5 801 aa12.19□□□□□ -0.46
BARD1-213ENST00000619009 FTSJ3Q8IY81 847 aaKnown RBP12.19□□□□□ -0.46
BARD1-213ENST00000619009 CGNL1Q0VF96 1302 aa12.19□□□□□ -0.46
BARD1-213ENST00000619009 E9PSI1 815 aa12.18□□□□□ -0.46
BARD1-213ENST00000619009 HMOX1P09601 288 aa12.18□□□□□ -0.46
BARD1-213ENST00000619009 MYH16Q9H6N6 1097 aa12.18□□□□□ -0.46
BARD1-213ENST00000619009 VIRMAQ69YN4 1812 aaKnown RBP12.18□□□□□ -0.46
BARD1-213ENST00000619009 ATP10AO60312 1499 aa12.17□□□□□ -0.46
BARD1-213ENST00000619009 ADGBQ8N7X0 1667 aa12.17□□□□□ -0.46
BARD1-213ENST00000619009 ZFYVE16Q7Z3T8 1539 aa12.17□□□□□ -0.46
BARD1-213ENST00000619009 STAC3Q96MF2 364 aa12.17□□□□□ -0.46
BARD1-213ENST00000619009 HSCBQ8IWL3 235 aa12.17□□□□□ -0.46
BARD1-213ENST00000619009 AMOTL2Q9Y2J4 779 aa12.17□□□□□ -0.46
BARD1-213ENST00000619009 NEO1Q92859 1461 aa12.16□□□□□ -0.46
BARD1-213ENST00000619009 ELL2O00472 640 aaPredicted RBP12.16□□□□□ -0.46
BARD1-213ENST00000619009 RPGRIP1LQ68CZ1 1315 aa12.16□□□□□ -0.46
BARD1-213ENST00000619009 RIPK4P57078 832 aa12.16□□□□□ -0.46
BARD1-213ENST00000619009 RWDD1Q9H446 243 aaPredicted RBP12.16□□□□□ -0.46
BARD1-213ENST00000619009 KIAA1211Q6ZU35 1233 aa12.15□□□□□ -0.46
BARD1-213ENST00000619009 TRMT2AQ8IZ69 625 aaKnown RBP12.15□□□□□ -0.46
BARD1-213ENST00000619009 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
BARD1-213ENST00000619009 LTKP29376 864 aa12.15□□□□□ -0.46
BARD1-213ENST00000619009 RRS1Q15050 365 aaKnown RBP12.15□□□□□ -0.46
BARD1-213ENST00000619009 ZRANB1Q9UGI0 708 aa12.15□□□□□ -0.46
BARD1-213ENST00000619009 MAGI2Q86UL8 1455 aa12.15□□□□□ -0.46
BARD1-213ENST00000619009 DNAJC5Q9H3Z4 198 aa12.15□□□□□ -0.46
BARD1-213ENST00000619009 TNRQ92752 1358 aa12.15□□□□□ -0.46
BARD1-213ENST00000619009 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
BARD1-213ENST00000619009 MAST1Q9Y2H9 1570 aa12.14□□□□□ -0.47
BARD1-213ENST00000619009 COL17A1Q9UMD9 1497 aaPredicted RBP12.14□□□□□ -0.47
BARD1-213ENST00000619009 CARD14Q9BXL6 1004 aa12.14□□□□□ -0.47
BARD1-213ENST00000619009 PDZRN3Q9UPQ7 1066 aa12.14□□□□□ -0.47
BARD1-213ENST00000619009 ESCO1Q5FWF5 840 aa12.13□□□□□ -0.47
BARD1-213ENST00000619009 ANKLE2Q86XL3 938 aa12.13□□□□□ -0.47
BARD1-213ENST00000619009 HSP90AB1P08238 724 aaKnown RBP12.13□□□□□ -0.47
BARD1-213ENST00000619009 MRE11P49959 708 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms