RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 IFT57Q9NWB7 429 aa11.05□□□□□ -0.64
COL25A1-208ENST00000610288 DNAJC5BQ9UF47 199 aa11.05□□□□□ -0.64
COL25A1-208ENST00000610288 RIPK4P57078 832 aa11.05□□□□□ -0.64
COL25A1-208ENST00000610288 TEFQ10587 303 aa11.05□□□□□ -0.64
COL25A1-208ENST00000610288 RUFY2Q8WXA3 655 aa11.05□□□□□ -0.64
COL25A1-208ENST00000610288 TIAM1Q13009 1591 aa11.05□□□□□ -0.64
COL25A1-208ENST00000610288 MCM2P49736 904 aa11.04□□□□□ -0.64
COL25A1-208ENST00000610288 TSPY26PQ9H489 355 aa11.04□□□□□ -0.64
COL25A1-208ENST00000610288 CWC22Q9HCG8 908 aaKnown RBP11.04□□□□□ -0.64
COL25A1-208ENST00000610288 ANO2Q9NQ90 1003 aa11.04□□□□□ -0.64
COL25A1-208ENST00000610288 FAM184AQ8NB25 1140 aa11.03□□□□□ -0.64
COL25A1-208ENST00000610288 TOMM22Q9NS69 142 aa11.03□□□□□ -0.64
COL25A1-208ENST00000610288 SMC3Q9UQE7 1217 aa11.03□□□□□ -0.64
COL25A1-208ENST00000610288 AQRO60306 1485 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL25A1-208ENST00000610288 ZKSCAN1P17029 563 aaPredicted RBP11.03□□□□□ -0.64
COL25A1-208ENST00000610288 C1orf141Q5JVX7 400 aa11.03□□□□□ -0.64
COL25A1-208ENST00000610288 ANKRD50Q9ULJ7 1429 aa11.03□□□□□ -0.64
COL25A1-208ENST00000610288 IRX3P78415 501 aaPredicted RBP11.03□□□□□ -0.64
COL25A1-208ENST00000610288 PRPF40AO75400 957 aaKnown RBP11.03□□□□□ -0.64
COL25A1-208ENST00000610288 K7ELQ4 463 aaPredicted RBP11.02□□□□□ -0.64
COL25A1-208ENST00000610288 BCAR3O75815 825 aa11.02□□□□□ -0.65
COL25A1-208ENST00000610288 SASS6Q6UVJ0 657 aa11.02□□□□□ -0.65
COL25A1-208ENST00000610288 SYNJ1O43426 1573 aa11.02□□□□□ -0.65
COL25A1-208ENST00000610288 PATL2C9JE40 543 aaKnown RBP11.02□□□□□ -0.65
COL25A1-208ENST00000610288 HOMER1Q86YM7 354 aa11.01□□□□□ -0.65
COL25A1-208ENST00000610288 PDCL2Q8N4E4 241 aa11.01□□□□□ -0.65
COL25A1-208ENST00000610288 TCP11L2Q8N4U5 519 aa11.01□□□□□ -0.65
COL25A1-208ENST00000610288 BICD2Q8TD16 824 aa11.01□□□□□ -0.65
COL25A1-208ENST00000610288 DEF6Q9H4E7 631 aa11.01□□□□□ -0.65
COL25A1-208ENST00000610288 ZHX1Q9UKY1 873 aaPredicted RBP11.01□□□□□ -0.65
COL25A1-208ENST00000610288 EIF2S2P20042 333 aaKnown RBP11.01□□□□□ -0.65
COL25A1-208ENST00000610288 GTF2E1P29083 439 aaPredicted RBP11.01□□□□□ -0.65
COL25A1-208ENST00000610288 GCC1Q96CN9 775 aa11.01□□□□□ -0.65
COL25A1-208ENST00000610288 CALCOCO1Q9P1Z2 691 aa11.01□□□□□ -0.65
COL25A1-208ENST00000610288 CCAR2Q8N163 923 aaKnown RBP11.01□□□□□ -0.65
COL25A1-208ENST00000610288 CT47B1P0C2W7 299 aaPredicted RBP11□□□□□ -0.65
COL25A1-208ENST00000610288 CLCN1P35523 988 aa11□□□□□ -0.65
COL25A1-208ENST00000610288 NOC3LQ8WTT2 800 aaKnown RBP11□□□□□ -0.65
COL25A1-208ENST00000610288 TMX4Q9H1E5 349 aaPredicted RBP11□□□□□ -0.65
COL25A1-208ENST00000610288 GNAI1P63096 354 aa11□□□□□ -0.65
COL25A1-208ENST00000610288 RASSF8Q8NHQ8 419 aa11□□□□□ -0.65
COL25A1-208ENST00000610288 VPS37CA5D8V6 355 aaPredicted RBP11□□□□□ -0.65
COL25A1-208ENST00000610288 MNS1Q8NEH6 495 aa11□□□□□ -0.65
COL25A1-208ENST00000610288 PHF23Q9BUL5 403 aaPredicted RBP11□□□□□ -0.65
COL25A1-208ENST00000610288 KIAA1107Q9UPP5 1409 aa10.99□□□□□ -0.65
COL25A1-208ENST00000610288 PLEKHH2Q8IVE3 1493 aa10.99□□□□□ -0.65
COL25A1-208ENST00000610288 RDXP35241 583 aaKnown RBP10.99□□□□□ -0.65
COL25A1-208ENST00000610288 NEXNQ0ZGT2 675 aa10.99□□□□□ -0.65
COL25A1-208ENST00000610288 C9orf78Q9NZ63 289 aaPredicted RBP10.99□□□□□ -0.65
COL25A1-208ENST00000610288 MEX3CQ5U5Q3 659 aaKnown RBP10.99□□□□□ -0.65
COL25A1-208ENST00000610288 AEBP1Q8IUX7 1158 aa10.99□□□□□ -0.65
COL25A1-208ENST00000610288 NECTIN2Q92692 538 aa10.99□□□□□ -0.65
COL25A1-208ENST00000610288 USP8P40818 1118 aa10.99□□□□□ -0.65
COL25A1-208ENST00000610288 DNAJC2Q99543 621 aaKnown RBP10.99□□□□□ -0.65
COL25A1-208ENST00000610288 GGNBP2Q9H3C7 697 aa10.99□□□□□ -0.65
COL25A1-208ENST00000610288 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.99□□□□□ -0.65
COL25A1-208ENST00000610288 EVA1CP58658 441 aa10.98□□□□□ -0.65
COL25A1-208ENST00000610288 CGNQ9P2M7 1197 aaKnown RBP10.98□□□□□ -0.65
COL25A1-208ENST00000610288 TPM1P09493 284 aa10.98□□□□□ -0.65
COL25A1-208ENST00000610288 NAIPQ13075 1403 aa10.98□□□□□ -0.65
COL25A1-208ENST00000610288 NCOA1Q15788 1441 aa10.98□□□□□ -0.65
COL25A1-208ENST00000610288 SCAPERQ9BY12 1400 aa10.98□□□□□ -0.65
COL25A1-208ENST00000610288 CFTRP13569 1480 aa10.98□□□□□ -0.65
COL25A1-208ENST00000610288 FKBP5Q13451 457 aaPredicted RBP10.98□□□□□ -0.65
COL25A1-208ENST00000610288 PRDM10Q9NQV6 1147 aa10.98□□□□□ -0.65
COL25A1-208ENST00000610288 EFCAB5A4FU69 1503 aa10.98□□□□□ -0.65
COL25A1-208ENST00000610288 RNF20Q5VTR2 975 aa10.97□□□□□ -0.65
COL25A1-208ENST00000610288 HMOX1P09601 288 aa10.97□□□□□ -0.65
COL25A1-208ENST00000610288 NEK4P51957 841 aa10.97□□□□□ -0.65
COL25A1-208ENST00000610288 SLFN5Q08AF3 891 aa10.97□□□□□ -0.65
COL25A1-208ENST00000610288 MVPQ14764 893 aaKnown RBP10.97□□□□□ -0.65
COL25A1-208ENST00000610288 WDR63Q8IWG1 891 aa10.97□□□□□ -0.65
COL25A1-208ENST00000610288 TPD52L1Q16890 204 aaPredicted RBP10.97□□□□□ -0.65
COL25A1-208ENST00000610288 TMEM132EQ6IEE7 984 aa10.97□□□□□ -0.65
COL25A1-208ENST00000610288 TTC5Q8N0Z6 440 aa10.97□□□□□ -0.65
COL25A1-208ENST00000610288 CCDC70Q6NSX1 233 aa10.97□□□□□ -0.65
COL25A1-208ENST00000610288 CCDC73Q6ZRK6 1079 aa10.97□□□□□ -0.65
COL25A1-208ENST00000610288 ACBD3Q9H3P7 528 aa10.97□□□□□ -0.65
COL25A1-208ENST00000610288 NCAPD3P42695 1498 aa10.96□□□□□ -0.65
COL25A1-208ENST00000610288 CREBRFQ8IUR6 639 aa10.96□□□□□ -0.65
COL25A1-208ENST00000610288 TRIM5Q9C035 493 aa10.96□□□□□ -0.65
COL25A1-208ENST00000610288 EHBP1L1Q8N3D4 1523 aa10.96□□□□□ -0.66
COL25A1-208ENST00000610288 SMAP1Q8IYB5 467 aaPredicted RBP10.96□□□□□ -0.66
COL25A1-208ENST00000610288 GTPBP4Q9BZE4 634 aaKnown RBP10.96□□□□□ -0.66
COL25A1-208ENST00000610288 CABP2Q9NPB3 220 aa10.96□□□□□ -0.66
COL25A1-208ENST00000610288 TSR1Q2NL82 804 aaKnown RBP10.95□□□□□ -0.66
COL25A1-208ENST00000610288 LEKR1Q6ZMV7 388 aa10.95□□□□□ -0.66
COL25A1-208ENST00000610288 AFAP1Q8N556 730 aa10.95□□□□□ -0.66
COL25A1-208ENST00000610288 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL25A1-208ENST00000610288 AK7Q96M32 723 aa10.95□□□□□ -0.66
COL25A1-208ENST00000610288 MAP3K1Q13233 1512 aa10.95□□□□□ -0.66
COL25A1-208ENST00000610288 IFIT2P09913 472 aaKnown RBP10.95□□□□□ -0.66
COL25A1-208ENST00000610288 MAPK8IP2Q13387 824 aaPredicted RBP10.95□□□□□ -0.66
COL25A1-208ENST00000610288 CFAP70Q5T0N1 1121 aa10.95□□□□□ -0.66
COL25A1-208ENST00000610288 TBC1D2Q9BYX2 928 aa10.95□□□□□ -0.66
COL25A1-208ENST00000610288 G3V3G9 751 aa10.95□□□□□ -0.66
COL25A1-208ENST00000610288 DYNC1I1O14576 645 aa10.95□□□□□ -0.66
COL25A1-208ENST00000610288 MTHFSP49914 203 aa10.95□□□□□ -0.66
COL25A1-208ENST00000610288 EXOSC9Q06265 439 aaKnown RBP10.95□□□□□ -0.66
COL25A1-208ENST00000610288 DCAF8Q5TAQ9 597 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms