RNA–Protein interactions for RNA: ENST00000608158.5

CTCFL-215, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-215ENST00000608158 BRD4O60885 1362 aaPredicted RBP22.54■■□□□ 1.2
CTCFL-215ENST00000608158 NPC1L1Q9UHC9 1359 aa22.54■■□□□ 1.2
CTCFL-215ENST00000608158 BCANQ96GW7 911 aa22.54■■□□□ 1.2
CTCFL-215ENST00000608158 MINK1Q8N4C8 1332 aaPredicted RBP22.54■■□□□ 1.2
CTCFL-215ENST00000608158 AMER1Q5JTC6 1135 aaPredicted RBP22.54■■□□□ 1.2
CTCFL-215ENST00000608158 PLEKHH1Q9ULM0 1364 aa22.53■■□□□ 1.2
CTCFL-215ENST00000608158 FAM135BQ49AJ0 1406 aa22.53■■□□□ 1.2
CTCFL-215ENST00000608158 DIP2AQ14689 1571 aa22.52■■□□□ 1.2
CTCFL-215ENST00000608158 NLRP13Q86W25 1043 aa22.5■■□□□ 1.19
CTCFL-215ENST00000608158 ATAD2Q6PL18 1390 aa22.5■■□□□ 1.19
CTCFL-215ENST00000608158 NINLQ9Y2I6 1382 aa22.5■■□□□ 1.19
CTCFL-215ENST00000608158 TMC1Q8TDI8 760 aa22.5■■□□□ 1.19
CTCFL-215ENST00000608158 CABP2Q9NPB3 220 aa22.5■■□□□ 1.19
CTCFL-215ENST00000608158 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
CTCFL-215ENST00000608158 WAPLQ7Z5K2 1190 aa22.49■■□□□ 1.19
CTCFL-215ENST00000608158 FAM9BQ8IZU0 186 aa22.49■■□□□ 1.19
CTCFL-215ENST00000608158 CARD14Q9BXL6 1004 aa22.49■■□□□ 1.19
CTCFL-215ENST00000608158 SLC12A5Q9H2X9 1139 aa22.49■■□□□ 1.19
CTCFL-215ENST00000608158 USP32Q8NFA0 1604 aa22.48■■□□□ 1.19
CTCFL-215ENST00000608158 SRPK2P78362 688 aaKnown RBP22.48■■□□□ 1.19
CTCFL-215ENST00000608158 SIRT1Q96EB6 747 aa22.47■■□□□ 1.19
CTCFL-215ENST00000608158 ANKRD36BQ8N2N9 1353 aa22.47■■□□□ 1.19
CTCFL-215ENST00000608158 HNRNPUQ00839 825 aaKnown RBP eCLIP22.45■■□□□ 1.18
CTCFL-215ENST00000608158 ROBO2Q9HCK4 1378 aa22.45■■□□□ 1.18
CTCFL-215ENST00000608158 SLC26A8Q96RN1 970 aa22.45■■□□□ 1.18
CTCFL-215ENST00000608158 PTPRUQ92729 1446 aa22.45■■□□□ 1.18
CTCFL-215ENST00000608158 TBX22Q9Y458 520 aa22.43■■□□□ 1.18
CTCFL-215ENST00000608158 SETD1BQ9UPS6 1966 aaKnown RBP22.43■■□□□ 1.18
CTCFL-215ENST00000608158 PNISRQ8TF01 805 aaKnown RBP22.42■■□□□ 1.18
CTCFL-215ENST00000608158 CDK19Q9BWU1 502 aa22.42■■□□□ 1.18
CTCFL-215ENST00000608158 ADGRB2O60241 1585 aa22.42■■□□□ 1.18
CTCFL-215ENST00000608158 PTCH1Q13635 1447 aa22.41■■□□□ 1.18
CTCFL-215ENST00000608158 A0A1W2PP64 1363 aa22.41■■□□□ 1.18
CTCFL-215ENST00000608158 XRN1Q8IZH2 1706 aaKnown RBP22.4■■□□□ 1.18
CTCFL-215ENST00000608158 CD163L1Q9NR16 1453 aa22.39■■□□□ 1.17
CTCFL-215ENST00000608158 PPP2R1AP30153 589 aa22.38■■□□□ 1.17
CTCFL-215ENST00000608158 PIK3R4Q99570 1358 aa22.36■■□□□ 1.17
CTCFL-215ENST00000608158 SCAF1Q9H7N4 1312 aaKnown RBP22.36■■□□□ 1.17
CTCFL-215ENST00000608158 WASLO00401 505 aaPredicted RBP22.36■■□□□ 1.17
CTCFL-215ENST00000608158 ATP7BP35670 1465 aa22.36■■□□□ 1.17
CTCFL-215ENST00000608158 ANKLE2Q86XL3 938 aa22.36■■□□□ 1.17
CTCFL-215ENST00000608158 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.36■■□□□ 1.17
CTCFL-215ENST00000608158 NSD2O96028 1365 aa22.35■■□□□ 1.17
CTCFL-215ENST00000608158 CGNL1Q0VF96 1302 aa22.35■■□□□ 1.17
CTCFL-215ENST00000608158 AMOTL2Q9Y2J4 779 aa22.34■■□□□ 1.17
CTCFL-215ENST00000608158 TERF2IPQ9NYB0 399 aa22.33■■□□□ 1.17
CTCFL-215ENST00000608158 ZBED9Q6R2W3 1325 aa22.33■■□□□ 1.16
CTCFL-215ENST00000608158 GTF3C3Q9Y5Q9 886 aa22.3■■□□□ 1.16
CTCFL-215ENST00000608158 PPIP5K1Q6PFW1 1433 aa22.3■■□□□ 1.16
CTCFL-215ENST00000608158 CABP1Q9NZU7 370 aa22.3■■□□□ 1.16
CTCFL-215ENST00000608158 HDGFL2Q7Z4V5 671 aaPredicted RBP22.29■■□□□ 1.16
CTCFL-215ENST00000608158 NPHP4O75161 1426 aaPredicted RBP22.29■■□□□ 1.16
CTCFL-215ENST00000608158 INSRP06213 1382 aa22.29■■□□□ 1.16
CTCFL-215ENST00000608158 CDC42BPGQ6DT37 1551 aa22.28■■□□□ 1.16
CTCFL-215ENST00000608158 TOPAZ1Q8N9V7 1692 aa22.28■■□□□ 1.16
CTCFL-215ENST00000608158 MORC1Q86VD1 984 aa22.27■■□□□ 1.16
CTCFL-215ENST00000608158 BLMP54132 1417 aaPredicted RBP22.26■■□□□ 1.15
CTCFL-215ENST00000608158 ANKRD26Q9UPS8 1709 aa22.26■■□□□ 1.15
CTCFL-215ENST00000608158 NUDT16Q96DE0 195 aaKnown RBP22.26■■□□□ 1.15
CTCFL-215ENST00000608158 CPSF1Q10570 1443 aaKnown RBP22.26■■□□□ 1.15
CTCFL-215ENST00000608158 PRR36Q9H6K5 1346 aa22.25■■□□□ 1.15
CTCFL-215ENST00000608158 KCNA6P17658 529 aa22.25■■□□□ 1.15
CTCFL-215ENST00000608158 CHD2O14647 1828 aaKnown RBP22.24■■□□□ 1.15
CTCFL-215ENST00000608158 KIF20BQ96Q89 1820 aa22.24■■□□□ 1.15
CTCFL-215ENST00000608158 CCDC61Q9Y6R9 512 aa22.23■■□□□ 1.15
CTCFL-215ENST00000608158 MON2Q7Z3U7 1717 aa22.22■■□□□ 1.15
CTCFL-215ENST00000608158 EDC4Q6P2E9 1401 aaKnown RBP22.22■■□□□ 1.15
CTCFL-215ENST00000608158 ITSN1Q15811 1721 aa22.21■■□□□ 1.15
CTCFL-215ENST00000608158 POLR3AO14802 1390 aaPredicted RBP22.21■■□□□ 1.15
CTCFL-215ENST00000608158 AKAP12Q02952 1782 aa22.2■■□□□ 1.14
CTCFL-215ENST00000608158 NCKAP5LQ9HCH0 1330 aa22.2■■□□□ 1.14
CTCFL-215ENST00000608158 NKTRP30414 1462 aaKnown RBP22.19■■□□□ 1.14
CTCFL-215ENST00000608158 NWD1Q149M9 1564 aa22.18■■□□□ 1.14
CTCFL-215ENST00000608158 FYB1O15117 783 aa22.18■■□□□ 1.14
CTCFL-215ENST00000608158 TNNT2P45379 298 aaPredicted RBP22.18■■□□□ 1.14
CTCFL-215ENST00000608158 WDR43Q15061 677 aaKnown RBP eCLIP22.18■■□□□ 1.14
CTCFL-215ENST00000608158 GGNBP2Q9H3C7 697 aa22.18■■□□□ 1.14
CTCFL-215ENST00000608158 NALCNQ8IZF0 1738 aa22.16■■□□□ 1.14
CTCFL-215ENST00000608158 NRKQ7Z2Y5 1582 aa22.16■■□□□ 1.14
CTCFL-215ENST00000608158 ANKARQ7Z5J8 1434 aa22.15■■□□□ 1.14
CTCFL-215ENST00000608158 FMN2Q9NZ56 1722 aa22.15■■□□□ 1.14
CTCFL-215ENST00000608158 ADAMTS8Q9UP79 889 aa22.14■■□□□ 1.14
CTCFL-215ENST00000608158 SHPRHQ149N8 1683 aa22.14■■□□□ 1.14
CTCFL-215ENST00000608158 KDM4FA0A1W2PPD8 638 aa22.12■■□□□ 1.13
CTCFL-215ENST00000608158 PLEKHG3A1L390 1219 aa22.12■■□□□ 1.13
CTCFL-215ENST00000608158 NUTM2FA1L443 756 aa22.12■■□□□ 1.13
CTCFL-215ENST00000608158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.12■■□□□ 1.13
CTCFL-215ENST00000608158 SENP3-EIF4A1A0A087X0R7 540 aa22.12■■□□□ 1.13
CTCFL-215ENST00000608158 ADGRL3Q9HAR2 1447 aa22.11■■□□□ 1.13
CTCFL-215ENST00000608158 MTHFSP49914 203 aa22.11■■□□□ 1.13
CTCFL-215ENST00000608158 ZNF692Q9BU19 519 aaPredicted RBP22.1■■□□□ 1.13
CTCFL-215ENST00000608158 USP6P35125 1406 aa22.1■■□□□ 1.13
CTCFL-215ENST00000608158 ACEP12821 1306 aa22.09■■□□□ 1.13
CTCFL-215ENST00000608158 SMG6Q86US8 1419 aaKnown RBP22.09■■□□□ 1.13
CTCFL-215ENST00000608158 CFAP53Q96M91 514 aa22.08■■□□□ 1.13
CTCFL-215ENST00000608158 NME9Q86XW9 330 aa22.07■■□□□ 1.12
CTCFL-215ENST00000608158 COL3A1P02461 1466 aaPredicted RBP22.07■■□□□ 1.12
CTCFL-215ENST00000608158 LMTK3Q96Q04 1460 aa22.07■■□□□ 1.12
CTCFL-215ENST00000608158 RGPD8O14715 1765 aaPredicted RBP22.05■■□□□ 1.12
CTCFL-215ENST00000608158 SSH2Q76I76 1423 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 2525.7 ms