RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 BRPF3Q9ULD4 1205 aa8.54□□□□□ -1.04
SRGAP2-211ENST00000604423 MTUS2Q5JR59 1369 aa8.54□□□□□ -1.04
SRGAP2-211ENST00000604423 SUPT6HQ7KZ85 1726 aaKnown RBP8.54□□□□□ -1.04
SRGAP2-211ENST00000604423 TRIM6-TRIM34B2RNG4 842 aa8.53□□□□□ -1.04
SRGAP2-211ENST00000604423 DAXXQ9UER7 740 aaPredicted RBP8.53□□□□□ -1.04
SRGAP2-211ENST00000604423 TSKSQ9UJT2 592 aa8.53□□□□□ -1.04
SRGAP2-211ENST00000604423 IGF1RP08069 1367 aa8.52□□□□□ -1.04
SRGAP2-211ENST00000604423 CTTNBP2Q8WZ74 1663 aa8.52□□□□□ -1.05
SRGAP2-211ENST00000604423 MS4A1P11836 297 aa8.52□□□□□ -1.05
SRGAP2-211ENST00000604423 PTPN5P54829 565 aa8.52□□□□□ -1.05
SRGAP2-211ENST00000604423 CDCA7LQ96GN5 454 aa8.52□□□□□ -1.05
SRGAP2-211ENST00000604423 SMAPO00193 183 aa8.51□□□□□ -1.05
SRGAP2-211ENST00000604423 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
SRGAP2-211ENST00000604423 PTPRKQ15262 1439 aa8.51□□□□□ -1.05
SRGAP2-211ENST00000604423 MYOM3Q5VTT5 1437 aa8.51□□□□□ -1.05
SRGAP2-211ENST00000604423 WNT2BQ93097 391 aa8.51□□□□□ -1.05
SRGAP2-211ENST00000604423 HMGXB3Q12766 1538 aa8.5□□□□□ -1.05
SRGAP2-211ENST00000604423 KIF7Q2M1P5 1343 aa8.5□□□□□ -1.05
SRGAP2-211ENST00000604423 RRP1P56182 461 aaKnown RBP8.49□□□□□ -1.05
SRGAP2-211ENST00000604423 BACH2Q9BYV9 841 aa8.49□□□□□ -1.05
SRGAP2-211ENST00000604423 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
SRGAP2-211ENST00000604423 EHBP1L1Q8N3D4 1523 aa8.49□□□□□ -1.05
SRGAP2-211ENST00000604423 NUTM2FA1L443 756 aa8.49□□□□□ -1.05
SRGAP2-211ENST00000604423 PRSS12P56730 875 aa8.49□□□□□ -1.05
SRGAP2-211ENST00000604423 CNGB1Q14028 1251 aaPredicted RBP8.49□□□□□ -1.05
SRGAP2-211ENST00000604423 GLIPR1L2Q4G1C9 344 aa8.49□□□□□ -1.05
SRGAP2-211ENST00000604423 NPDC1Q9NQX5 325 aaPredicted RBP8.48□□□□□ -1.05
SRGAP2-211ENST00000604423 CFTRP13569 1480 aa8.48□□□□□ -1.05
SRGAP2-211ENST00000604423 C3orf80F5H4A9 247 aa8.47□□□□□ -1.05
SRGAP2-211ENST00000604423 L3MBTL2Q969R5 705 aa8.47□□□□□ -1.05
SRGAP2-211ENST00000604423 THOC2Q8NI27 1593 aaKnown RBP8.47□□□□□ -1.05
SRGAP2-211ENST00000604423 NFKBIBQ15653 356 aa8.47□□□□□ -1.05
SRGAP2-211ENST00000604423 RBM26Q5T8P6 1007 aaKnown RBP8.47□□□□□ -1.05
SRGAP2-211ENST00000604423 PADI6Q6TGC4 694 aa8.47□□□□□ -1.05
SRGAP2-211ENST00000604423 PACS2Q86VP3 889 aa8.47□□□□□ -1.05
SRGAP2-211ENST00000604423 FAM43AQ8N2R8 423 aa8.47□□□□□ -1.05
SRGAP2-211ENST00000604423 CERKQ8TCT0 537 aa8.47□□□□□ -1.05
SRGAP2-211ENST00000604423 TMC1Q8TDI8 760 aa8.47□□□□□ -1.05
SRGAP2-211ENST00000604423 FRAT1Q92837 279 aaPredicted RBP8.47□□□□□ -1.05
SRGAP2-211ENST00000604423 POLR3GLQ9BT43 218 aa8.47□□□□□ -1.05
SRGAP2-211ENST00000604423 BCAMP50895 628 aa8.46□□□□□ -1.05
SRGAP2-211ENST00000604423 THSD4Q6ZMP0 1018 aa8.46□□□□□ -1.05
SRGAP2-211ENST00000604423 EXOC6Q8TAG9 804 aa8.46□□□□□ -1.05
SRGAP2-211ENST00000604423 ZFRQ96KR1 1074 aaKnown RBP8.46□□□□□ -1.05
SRGAP2-211ENST00000604423 HCSTQ9UBK5 93 aa8.46□□□□□ -1.05
SRGAP2-211ENST00000604423 MIA2Q96PC5 1412 aa8.46□□□□□ -1.05
SRGAP2-211ENST00000604423 LRRIQ1Q96JM4 1722 aa8.46□□□□□ -1.06
SRGAP2-211ENST00000604423 SNAPC4Q5SXM2 1469 aa8.46□□□□□ -1.06
SRGAP2-211ENST00000604423 TESPA1A2RU30 521 aaPredicted RBP8.46□□□□□ -1.06
SRGAP2-211ENST00000604423 RRP7BPQ9NSQ0 103 aa8.46□□□□□ -1.06
SRGAP2-211ENST00000604423 PNMA3Q9UL41 463 aa8.46□□□□□ -1.06
SRGAP2-211ENST00000604423 ANKK1Q8NFD2 765 aa8.45□□□□□ -1.06
SRGAP2-211ENST00000604423 PKNOX2Q96KN3 472 aa8.45□□□□□ -1.06
SRGAP2-211ENST00000604423 CUL7Q14999 1698 aa8.45□□□□□ -1.06
SRGAP2-211ENST00000604423 RPRD2Q5VT52 1461 aaKnown RBP8.45□□□□□ -1.06
SRGAP2-211ENST00000604423 TEX14Q8IWB6 1497 aa8.45□□□□□ -1.06
SRGAP2-211ENST00000604423 KIF21AQ7Z4S6 1674 aa8.44□□□□□ -1.06
SRGAP2-211ENST00000604423 RCAN3Q9UKA8 241 aa8.44□□□□□ -1.06
SRGAP2-211ENST00000604423 CC2D2AQ9P2K1 1620 aa8.44□□□□□ -1.06
SRGAP2-211ENST00000604423 DENND4BO75064 1496 aaPredicted RBP8.44□□□□□ -1.06
SRGAP2-211ENST00000604423 UGGT2Q9NYU1 1516 aa8.44□□□□□ -1.06
SRGAP2-211ENST00000604423 ONECUT3O60422 494 aaPredicted RBP8.44□□□□□ -1.06
SRGAP2-211ENST00000604423 PTGDRQ13258 359 aa8.44□□□□□ -1.06
SRGAP2-211ENST00000604423 FAM98CQ17RN3 349 aaKnown RBP8.44□□□□□ -1.06
SRGAP2-211ENST00000604423 NUDT18Q6ZVK8 323 aa8.44□□□□□ -1.06
SRGAP2-211ENST00000604423 MPHOSPH9Q99550 1183 aa8.44□□□□□ -1.06
SRGAP2-211ENST00000604423 DHX29Q7Z478 1369 aaKnown RBP8.44□□□□□ -1.06
SRGAP2-211ENST00000604423 SPATA31E1Q6ZUB1 1445 aa8.43□□□□□ -1.06
SRGAP2-211ENST00000604423 KDM6BO15054 1643 aa8.43□□□□□ -1.06
SRGAP2-211ENST00000604423 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
SRGAP2-211ENST00000604423 ROCK2O75116 1388 aaKnown RBP8.42□□□□□ -1.06
SRGAP2-211ENST00000604423 LAPTM4BQ86VI4 370 aa8.42□□□□□ -1.06
SRGAP2-211ENST00000604423 TATDN2Q93075 761 aa8.42□□□□□ -1.06
SRGAP2-211ENST00000604423 CHIC2Q9UKJ5 165 aa8.42□□□□□ -1.06
SRGAP2-211ENST00000604423 KIF14Q15058 1648 aa8.42□□□□□ -1.06
SRGAP2-211ENST00000604423 TCOF1Q13428 1488 aaKnown RBP8.42□□□□□ -1.06
SRGAP2-211ENST00000604423 NBPF26B4DH59 902 aa8.42□□□□□ -1.06
SRGAP2-211ENST00000604423 PNISRQ8TF01 805 aaKnown RBP8.42□□□□□ -1.06
SRGAP2-211ENST00000604423 FAM161AQ3B820 660 aa8.41□□□□□ -1.06
SRGAP2-211ENST00000604423 SMYD5Q6GMV2 418 aa8.41□□□□□ -1.06
SRGAP2-211ENST00000604423 BCORL1Q5H9F3 1711 aa8.41□□□□□ -1.06
SRGAP2-211ENST00000604423 USP47Q96K76 1375 aa8.41□□□□□ -1.06
SRGAP2-211ENST00000604423 KIF15Q9NS87 1388 aa8.41□□□□□ -1.06
SRGAP2-211ENST00000604423 RNF40O75150 1001 aa8.41□□□□□ -1.06
SRGAP2-211ENST00000604423 NBPF8Q3BBV2 869 aa8.41□□□□□ -1.06
SRGAP2-211ENST00000604423 ARID4BQ4LE39 1312 aaPredicted RBP8.4□□□□□ -1.06
SRGAP2-211ENST00000604423 BRD4O60885 1362 aaPredicted RBP8.4□□□□□ -1.06
SRGAP2-211ENST00000604423 PDE3BQ13370 1112 aa8.4□□□□□ -1.06
SRGAP2-211ENST00000604423 KTN1Q86UP2 1357 aaKnown RBP8.4□□□□□ -1.07
SRGAP2-211ENST00000604423 SAMD9Q5K651 1589 aa8.39□□□□□ -1.07
SRGAP2-211ENST00000604423 SOWAHBA6NEL2 793 aa8.39□□□□□ -1.07
SRGAP2-211ENST00000604423 SAMD7Q7Z3H4 446 aa8.39□□□□□ -1.07
SRGAP2-211ENST00000604423 LRCH3Q96II8 777 aa8.39□□□□□ -1.07
SRGAP2-211ENST00000604423 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
SRGAP2-211ENST00000604423 GRIN2BQ13224 1484 aa8.39□□□□□ -1.07
SRGAP2-211ENST00000604423 MYBBP1AQ9BQG0 1328 aaKnown RBP8.39□□□□□ -1.07
SRGAP2-211ENST00000604423 LRPPRCP42704 1394 aaKnown RBP8.39□□□□□ -1.07
SRGAP2-211ENST00000604423 KDM5CP41229 1560 aa8.39□□□□□ -1.07
SRGAP2-211ENST00000604423 SLC4A3P48751 1232 aa8.39□□□□□ -1.07
SRGAP2-211ENST00000604423 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms