RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 PDE3AQ14432 1141 aa24.73■■□□□ 1.55
ARHGEF1-218ENST00000599589 IQGAP1P46940 1657 aa24.72■■□□□ 1.55
ARHGEF1-218ENST00000599589 CANXP27824 592 aaKnown RBP24.72■■□□□ 1.55
ARHGEF1-218ENST00000599589 SYNMO15061 1565 aa24.72■■□□□ 1.55
ARHGEF1-218ENST00000599589 ABCA6Q8N139 1617 aa24.71■■□□□ 1.55
ARHGEF1-218ENST00000599589 MYOM2P54296 1465 aa24.71■■□□□ 1.55
ARHGEF1-218ENST00000599589 KIF1BO60333 1816 aa24.7■■□□□ 1.54
ARHGEF1-218ENST00000599589 TBC1D2Q9BYX2 928 aa24.69■■□□□ 1.54
ARHGEF1-218ENST00000599589 KIAA1210Q9ULL0 1709 aa24.69■■□□□ 1.54
ARHGEF1-218ENST00000599589 CENPJQ9HC77 1338 aaPredicted RBP24.69■■□□□ 1.54
ARHGEF1-218ENST00000599589 XRCC6P12956 609 aaKnown RBP eCLIP24.68■■□□□ 1.54
ARHGEF1-218ENST00000599589 NPATQ14207 1427 aa24.68■■□□□ 1.54
ARHGEF1-218ENST00000599589 UPF2Q9HAU5 1272 aaKnown RBP24.68■■□□□ 1.54
ARHGEF1-218ENST00000599589 MAP3K4Q9Y6R4 1608 aa24.67■■□□□ 1.54
ARHGEF1-218ENST00000599589 TBC1D32Q96NH3 1257 aa24.67■■□□□ 1.54
ARHGEF1-218ENST00000599589 CDCA8Q53HL2 280 aa24.66■■□□□ 1.54
ARHGEF1-218ENST00000599589 GOLGA6L3A6NEY3 463 aa24.66■■□□□ 1.54
ARHGEF1-218ENST00000599589 SPRYD3Q8NCJ5 442 aa24.65■■□□□ 1.54
ARHGEF1-218ENST00000599589 ADGRF5Q8IZF2 1346 aa24.65■■□□□ 1.54
ARHGEF1-218ENST00000599589 NINLQ9Y2I6 1382 aa24.65■■□□□ 1.54
ARHGEF1-218ENST00000599589 GLI2P10070 1586 aa24.65■■□□□ 1.54
ARHGEF1-218ENST00000599589 MYOM1P52179 1685 aa24.64■■□□□ 1.54
ARHGEF1-218ENST00000599589 GZF1Q9H116 711 aaPredicted RBP24.64■■□□□ 1.54
ARHGEF1-218ENST00000599589 ABCC3O15438 1527 aa24.64■■□□□ 1.53
ARHGEF1-218ENST00000599589 CFAP70Q5T0N1 1121 aa24.63■■□□□ 1.53
ARHGEF1-218ENST00000599589 PANK2Q9BZ23 570 aa24.63■■□□□ 1.53
ARHGEF1-218ENST00000599589 DIP2CQ9Y2E4 1556 aa24.63■■□□□ 1.53
ARHGEF1-218ENST00000599589 FSD2A1L4K1 749 aa24.62■■□□□ 1.53
ARHGEF1-218ENST00000599589 NPC1L1Q9UHC9 1359 aa24.62■■□□□ 1.53
ARHGEF1-218ENST00000599589 ADGRB3O60242 1522 aa24.62■■□□□ 1.53
ARHGEF1-218ENST00000599589 NAP1L5Q96NT1 182 aaPredicted RBP24.62■■□□□ 1.53
ARHGEF1-218ENST00000599589 RICTORQ6R327 1708 aa24.61■■□□□ 1.53
ARHGEF1-218ENST00000599589 SLC24A1O60721 1099 aa24.61■■□□□ 1.53
ARHGEF1-218ENST00000599589 CHGAP10645 457 aaKnown RBP24.61■■□□□ 1.53
ARHGEF1-218ENST00000599589 IFT172Q9UG01 1749 aa24.61■■□□□ 1.53
ARHGEF1-218ENST00000599589 NRXN1Q9ULB1 1477 aa24.6■■□□□ 1.53
ARHGEF1-218ENST00000599589 MCM4P33991 863 aa24.6■■□□□ 1.53
ARHGEF1-218ENST00000599589 PMFBP1Q8TBY8 1022 aa24.6■■□□□ 1.53
ARHGEF1-218ENST00000599589 PCDHB15Q9Y5E8 787 aa24.6■■□□□ 1.53
ARHGEF1-218ENST00000599589 MROH2AA6NES4 1674 aa24.6■■□□□ 1.53
ARHGEF1-218ENST00000599589 RIMBP3CA6NJZ7 1639 aa24.59■■□□□ 1.53
ARHGEF1-218ENST00000599589 RIMBP3BA6NNM3 1639 aa24.59■■□□□ 1.53
ARHGEF1-218ENST00000599589 RIMBP3Q9UFD9 1639 aa24.59■■□□□ 1.53
ARHGEF1-218ENST00000599589 PDZRN3Q9UPQ7 1066 aa24.59■■□□□ 1.53
ARHGEF1-218ENST00000599589 PNNQ9H307 717 aaKnown RBP24.59■■□□□ 1.53
ARHGEF1-218ENST00000599589 WWC1Q8IX03 1113 aa24.58■■□□□ 1.53
ARHGEF1-218ENST00000599589 TNNQ9UQP3 1299 aa24.57■■□□□ 1.52
ARHGEF1-218ENST00000599589 NOS1P29475 1434 aa24.57■■□□□ 1.52
ARHGEF1-218ENST00000599589 CLCN1P35523 988 aa24.56■■□□□ 1.52
ARHGEF1-218ENST00000599589 NGEFQ8N5V2 710 aa24.56■■□□□ 1.52
ARHGEF1-218ENST00000599589 RPGRIP1LQ68CZ1 1315 aa24.56■■□□□ 1.52
ARHGEF1-218ENST00000599589 FAM69CQ0P6D2 419 aa24.55■■□□□ 1.52
ARHGEF1-218ENST00000599589 CAMSAP1Q5T5Y3 1602 aa24.55■■□□□ 1.52
ARHGEF1-218ENST00000599589 RLBP1P12271 317 aa24.55■■□□□ 1.52
ARHGEF1-218ENST00000599589 YEATS2Q9ULM3 1422 aa24.54■■□□□ 1.52
ARHGEF1-218ENST00000599589 RARSP54136 660 aaKnown RBP24.53■■□□□ 1.52
ARHGEF1-218ENST00000599589 CFAP65Q6ZU64 1925 aaKnown RBP24.53■■□□□ 1.52
ARHGEF1-218ENST00000599589 NEUROD2Q15784 382 aa24.53■■□□□ 1.52
ARHGEF1-218ENST00000599589 ZMYM3Q14202 1370 aa24.53■■□□□ 1.52
ARHGEF1-218ENST00000599589 KDM5AP29375 1690 aaKnown RBP24.53■■□□□ 1.52
ARHGEF1-218ENST00000599589 ARHGAP31Q2M1Z3 1444 aa24.52■■□□□ 1.52
ARHGEF1-218ENST00000599589 TRAK2O60296 914 aa24.51■■□□□ 1.51
ARHGEF1-218ENST00000599589 GLIPR1L2Q4G1C9 344 aa24.51■■□□□ 1.51
ARHGEF1-218ENST00000599589 BCL2L13Q9BXK5 485 aa24.5■■□□□ 1.51
ARHGEF1-218ENST00000599589 CHMP5Q9NZZ3 219 aa24.5■■□□□ 1.51
ARHGEF1-218ENST00000599589 RRP7AQ9Y3A4 280 aaKnown RBP24.49■■□□□ 1.51
ARHGEF1-218ENST00000599589 AAMPQ13685 434 aa24.49■■□□□ 1.51
ARHGEF1-218ENST00000599589 C14orf93Q9H972 538 aaKnown RBP24.49■■□□□ 1.51
ARHGEF1-218ENST00000599589 SETBP1Q9Y6X0 1596 aa24.49■■□□□ 1.51
ARHGEF1-218ENST00000599589 RWDD1Q9H446 243 aaPredicted RBP24.48■■□□□ 1.51
ARHGEF1-218ENST00000599589 DIP2BQ9P265 1576 aa24.48■■□□□ 1.51
ARHGEF1-218ENST00000599589 CARD14Q9BXL6 1004 aa24.48■■□□□ 1.51
ARHGEF1-218ENST00000599589 ZC3H13Q5T200 1668 aaKnown RBP24.48■■□□□ 1.51
ARHGEF1-218ENST00000599589 PPLO60437 1756 aa24.48■■□□□ 1.51
ARHGEF1-218ENST00000599589 MRE11P49959 708 aa24.47■■□□□ 1.51
ARHGEF1-218ENST00000599589 C22orf23Q9BZE7 217 aa24.47■■□□□ 1.51
ARHGEF1-218ENST00000599589 SIGLEC1Q9BZZ2 1709 aa24.46■■□□□ 1.51
ARHGEF1-218ENST00000599589 HSP90AA1P07900 732 aaKnown RBP24.46■■□□□ 1.51
ARHGEF1-218ENST00000599589 MFAP1P55081 439 aaKnown RBP24.46■■□□□ 1.51
ARHGEF1-218ENST00000599589 PKNOX2Q96KN3 472 aa24.46■■□□□ 1.51
ARHGEF1-218ENST00000599589 SBNO2Q9Y2G9 1366 aa24.45■■□□□ 1.5
ARHGEF1-218ENST00000599589 PIK3C2BO00750 1634 aa24.45■■□□□ 1.5
ARHGEF1-218ENST00000599589 ERVK-7P63135 1459 aa24.44■■□□□ 1.5
ARHGEF1-218ENST00000599589 HSP90AA2PQ14568 343 aaPredicted RBP24.44■■□□□ 1.5
ARHGEF1-218ENST00000599589 POLR3AO14802 1390 aaPredicted RBP24.43■■□□□ 1.5
ARHGEF1-218ENST00000599589 GRPEL1Q9HAV7 217 aa24.43■■□□□ 1.5
ARHGEF1-218ENST00000599589 SLC52A1Q9NWF4 448 aa24.43■■□□□ 1.5
ARHGEF1-218ENST00000599589 MYO3AQ8NEV4 1616 aa24.42■■□□□ 1.5
ARHGEF1-218ENST00000599589 VGFO15240 615 aaPredicted RBP24.42■■□□□ 1.5
ARHGEF1-218ENST00000599589 MYH16Q9H6N6 1097 aa24.41■■□□□ 1.5
ARHGEF1-218ENST00000599589 IDI1Q13907 227 aa24.4■■□□□ 1.5
ARHGEF1-218ENST00000599589 VSIG10Q8N0Z9 540 aa24.4■■□□□ 1.5
ARHGEF1-218ENST00000599589 TCP11L2Q8N4U5 519 aa24.4■■□□□ 1.5
ARHGEF1-218ENST00000599589 SHPRHQ149N8 1683 aa24.4■■□□□ 1.5
ARHGEF1-218ENST00000599589 RUNDC1Q96C34 613 aa24.4■■□□□ 1.5
ARHGEF1-218ENST00000599589 TRAK1Q9UPV9 953 aa24.39■■□□□ 1.5
ARHGEF1-218ENST00000599589 RRP9O43818 475 aaKnown RBP24.39■■□□□ 1.49
ARHGEF1-218ENST00000599589 ADGRB1O14514 1584 aa24.39■■□□□ 1.49
ARHGEF1-218ENST00000599589 ERBB4Q15303 1308 aa24.37■■□□□ 1.49
ARHGEF1-218ENST00000599589 DDX11L8A8MPP1 907 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms