RNA–Protein interactions for RNA: ENST00000599255.5

EMP3-208, Transcript of epithelial membrane protein 3, humanhuman

TSL 3

Gene EMP3, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-208ENST00000599255 NINLQ9Y2I6 1382 aa19.41■□□□□ 0.7
EMP3-208ENST00000599255 CCDC184Q52MB2 194 aa19.4■□□□□ 0.7
EMP3-208ENST00000599255 BRD4O60885 1362 aaPredicted RBP19.4■□□□□ 0.7
EMP3-208ENST00000599255 BCANQ96GW7 911 aa19.39■□□□□ 0.69
EMP3-208ENST00000599255 SETD1BQ9UPS6 1966 aaKnown RBP19.39■□□□□ 0.69
EMP3-208ENST00000599255 USP32Q8NFA0 1604 aa19.38■□□□□ 0.69
EMP3-208ENST00000599255 ATAD2Q6PL18 1390 aa19.37■□□□□ 0.69
EMP3-208ENST00000599255 AMER1Q5JTC6 1135 aaPredicted RBP19.37■□□□□ 0.69
EMP3-208ENST00000599255 NLRP13Q86W25 1043 aa19.36■□□□□ 0.69
EMP3-208ENST00000599255 TBX22Q9Y458 520 aa19.36■□□□□ 0.69
EMP3-208ENST00000599255 SAFB2Q14151 953 aaKnown RBP eCLIP19.35■□□□□ 0.69
EMP3-208ENST00000599255 MINK1Q8N4C8 1332 aaPredicted RBP19.34■□□□□ 0.69
EMP3-208ENST00000599255 CNGB1Q14028 1251 aaPredicted RBP19.34■□□□□ 0.69
EMP3-208ENST00000599255 CC2D1BQ5T0F9 858 aaKnown RBP19.34■□□□□ 0.69
EMP3-208ENST00000599255 ANKRD36BQ8N2N9 1353 aa19.33■□□□□ 0.69
EMP3-208ENST00000599255 TMC1Q8TDI8 760 aa19.33■□□□□ 0.68
EMP3-208ENST00000599255 PLEKHH1Q9ULM0 1364 aa19.32■□□□□ 0.68
EMP3-208ENST00000599255 SRPK2P78362 688 aaKnown RBP19.32■□□□□ 0.68
EMP3-208ENST00000599255 CARD14Q9BXL6 1004 aa19.32■□□□□ 0.68
EMP3-208ENST00000599255 SLC12A5Q9H2X9 1139 aa19.32■□□□□ 0.68
EMP3-208ENST00000599255 CABP2Q9NPB3 220 aa19.32■□□□□ 0.68
EMP3-208ENST00000599255 WAPLQ7Z5K2 1190 aa19.31■□□□□ 0.68
EMP3-208ENST00000599255 ADGRB2O60241 1585 aa19.31■□□□□ 0.68
EMP3-208ENST00000599255 PIK3R4Q99570 1358 aa19.31■□□□□ 0.68
EMP3-208ENST00000599255 CDK19Q9BWU1 502 aa19.3■□□□□ 0.68
EMP3-208ENST00000599255 NSD3Q9BZ95 1437 aa19.3■□□□□ 0.68
EMP3-208ENST00000599255 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
EMP3-208ENST00000599255 PNISRQ8TF01 805 aaKnown RBP19.29■□□□□ 0.68
EMP3-208ENST00000599255 XRN1Q8IZH2 1706 aaKnown RBP19.28■□□□□ 0.68
EMP3-208ENST00000599255 PTCH1Q13635 1447 aa19.28■□□□□ 0.68
EMP3-208ENST00000599255 PTPRUQ92729 1446 aa19.28■□□□□ 0.68
EMP3-208ENST00000599255 ANKLE2Q86XL3 938 aa19.28■□□□□ 0.68
EMP3-208ENST00000599255 SLC26A8Q96RN1 970 aa19.27■□□□□ 0.68
EMP3-208ENST00000599255 ROBO2Q9HCK4 1378 aa19.27■□□□□ 0.68
EMP3-208ENST00000599255 WASLO00401 505 aaPredicted RBP19.26■□□□□ 0.67
EMP3-208ENST00000599255 NSD2O96028 1365 aa19.26■□□□□ 0.67
EMP3-208ENST00000599255 ATP7BP35670 1465 aa19.25■□□□□ 0.67
EMP3-208ENST00000599255 PPP2R1AP30153 589 aa19.25■□□□□ 0.67
EMP3-208ENST00000599255 HNRNPUQ00839 825 aaKnown RBP eCLIP19.25■□□□□ 0.67
EMP3-208ENST00000599255 TERF2IPQ9NYB0 399 aa19.25■□□□□ 0.67
EMP3-208ENST00000599255 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.25■□□□□ 0.67
EMP3-208ENST00000599255 CD163L1Q9NR16 1453 aa19.24■□□□□ 0.67
EMP3-208ENST00000599255 INSRP06213 1382 aa19.24■□□□□ 0.67
EMP3-208ENST00000599255 CGNL1Q0VF96 1302 aa19.24■□□□□ 0.67
EMP3-208ENST00000599255 A0A1W2PP64 1363 aa19.23■□□□□ 0.67
EMP3-208ENST00000599255 AMOTL2Q9Y2J4 779 aa19.23■□□□□ 0.67
EMP3-208ENST00000599255 ANKRD26Q9UPS8 1709 aa19.22■□□□□ 0.67
EMP3-208ENST00000599255 CHD2O14647 1828 aaKnown RBP19.21■□□□□ 0.67
EMP3-208ENST00000599255 HDGFL2Q7Z4V5 671 aaPredicted RBP19.21■□□□□ 0.67
EMP3-208ENST00000599255 ZBED9Q6R2W3 1325 aa19.19■□□□□ 0.66
EMP3-208ENST00000599255 NPHP4O75161 1426 aaPredicted RBP19.18■□□□□ 0.66
EMP3-208ENST00000599255 TOPAZ1Q8N9V7 1692 aa19.18■□□□□ 0.66
EMP3-208ENST00000599255 CABP1Q9NZU7 370 aa19.18■□□□□ 0.66
EMP3-208ENST00000599255 CDC42BPGQ6DT37 1551 aa19.18■□□□□ 0.66
EMP3-208ENST00000599255 KIF20BQ96Q89 1820 aa19.18■□□□□ 0.66
EMP3-208ENST00000599255 PPIP5K1Q6PFW1 1433 aa19.17■□□□□ 0.66
EMP3-208ENST00000599255 MORC1Q86VD1 984 aa19.17■□□□□ 0.66
EMP3-208ENST00000599255 ITSN1Q15811 1721 aa19.17■□□□□ 0.66
EMP3-208ENST00000599255 AKAP12Q02952 1782 aa19.16■□□□□ 0.66
EMP3-208ENST00000599255 NUDT16Q96DE0 195 aaKnown RBP19.16■□□□□ 0.66
EMP3-208ENST00000599255 MON2Q7Z3U7 1717 aa19.16■□□□□ 0.66
EMP3-208ENST00000599255 CPSF1Q10570 1443 aaKnown RBP19.16■□□□□ 0.66
EMP3-208ENST00000599255 CCDC61Q9Y6R9 512 aa19.15■□□□□ 0.66
EMP3-208ENST00000599255 POLR3AO14802 1390 aaPredicted RBP19.13■□□□□ 0.65
EMP3-208ENST00000599255 BLMP54132 1417 aaPredicted RBP19.13■□□□□ 0.65
EMP3-208ENST00000599255 EDC4Q6P2E9 1401 aaKnown RBP19.12■□□□□ 0.65
EMP3-208ENST00000599255 NWD1Q149M9 1564 aa19.11■□□□□ 0.65
EMP3-208ENST00000599255 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
EMP3-208ENST00000599255 KCNA6P17658 529 aa19.11■□□□□ 0.65
EMP3-208ENST00000599255 PRR36Q9H6K5 1346 aa19.1■□□□□ 0.65
EMP3-208ENST00000599255 ZNF692Q9BU19 519 aaPredicted RBP19.1■□□□□ 0.65
EMP3-208ENST00000599255 GTF3C3Q9Y5Q9 886 aa19.1■□□□□ 0.65
EMP3-208ENST00000599255 ANKARQ7Z5J8 1434 aa19.08■□□□□ 0.65
EMP3-208ENST00000599255 FMN2Q9NZ56 1722 aa19.08■□□□□ 0.65
EMP3-208ENST00000599255 PLEKHG3A1L390 1219 aa19.08■□□□□ 0.64
EMP3-208ENST00000599255 FYB1O15117 783 aa19.08■□□□□ 0.64
EMP3-208ENST00000599255 WDR43Q15061 677 aaKnown RBP eCLIP19.08■□□□□ 0.64
EMP3-208ENST00000599255 NCKAP5LQ9HCH0 1330 aa19.07■□□□□ 0.64
EMP3-208ENST00000599255 NRKQ7Z2Y5 1582 aa19.06■□□□□ 0.64
EMP3-208ENST00000599255 NALCNQ8IZF0 1738 aa19.06■□□□□ 0.64
EMP3-208ENST00000599255 SHPRHQ149N8 1683 aa19.05■□□□□ 0.64
EMP3-208ENST00000599255 KDM4FA0A1W2PPD8 638 aa19.04■□□□□ 0.64
EMP3-208ENST00000599255 GGNBP2Q9H3C7 697 aa19.04■□□□□ 0.64
EMP3-208ENST00000599255 ADAMTS8Q9UP79 889 aa19.04■□□□□ 0.64
EMP3-208ENST00000599255 CFAP53Q96M91 514 aa19.03■□□□□ 0.64
EMP3-208ENST00000599255 NKTRP30414 1462 aaKnown RBP19.03■□□□□ 0.64
EMP3-208ENST00000599255 RGPD8O14715 1765 aaPredicted RBP19.01■□□□□ 0.63
EMP3-208ENST00000599255 ADGRL3Q9HAR2 1447 aa19.01■□□□□ 0.63
EMP3-208ENST00000599255 MTHFSP49914 203 aa19.01■□□□□ 0.63
EMP3-208ENST00000599255 TNNT2P45379 298 aaPredicted RBP19■□□□□ 0.63
EMP3-208ENST00000599255 USP6P35125 1406 aa19■□□□□ 0.63
EMP3-208ENST00000599255 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
EMP3-208ENST00000599255 ACEP12821 1306 aa19■□□□□ 0.63
EMP3-208ENST00000599255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.99■□□□□ 0.63
EMP3-208ENST00000599255 PDE3BQ13370 1112 aa18.98■□□□□ 0.63
EMP3-208ENST00000599255 SSH2Q76I76 1423 aa18.97■□□□□ 0.63
EMP3-208ENST00000599255 LMTK3Q96Q04 1460 aa18.97■□□□□ 0.63
EMP3-208ENST00000599255 AATKQ6ZMQ8 1374 aa18.96■□□□□ 0.63
EMP3-208ENST00000599255 TTC21BQ7Z4L5 1316 aa18.96■□□□□ 0.63
EMP3-208ENST00000599255 TTC21AQ8NDW8 1320 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms