RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 BRD4O60885 1362 aaPredicted RBP20.17■□□□□ 0.82
CDK5RAP3-218ENST00000580391 SETD1BQ9UPS6 1966 aaKnown RBP20.17■□□□□ 0.82
CDK5RAP3-218ENST00000580391 TECPR2O15040 1411 aa20.17■□□□□ 0.82
CDK5RAP3-218ENST00000580391 CABP2Q9NPB3 220 aa20.17■□□□□ 0.82
CDK5RAP3-218ENST00000580391 MED14O60244 1454 aa20.17■□□□□ 0.82
CDK5RAP3-218ENST00000580391 TMC1Q8TDI8 760 aa20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 USP32Q8NFA0 1604 aa20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 HNRNPUQ00839 825 aaKnown RBP eCLIP20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 WAPLQ7Z5K2 1190 aa20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 PUS7Q96PZ0 661 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 CARD14Q9BXL6 1004 aa20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 SLC12A5Q9H2X9 1139 aa20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 EID1Q9Y6B2 187 aa20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
CDK5RAP3-218ENST00000580391 NPC1L1Q9UHC9 1359 aa20.14■□□□□ 0.81
CDK5RAP3-218ENST00000580391 NSD3Q9BZ95 1437 aa20.14■□□□□ 0.81
CDK5RAP3-218ENST00000580391 NLRP13Q86W25 1043 aa20.14■□□□□ 0.81
CDK5RAP3-218ENST00000580391 DIP2AQ14689 1571 aa20.13■□□□□ 0.81
CDK5RAP3-218ENST00000580391 SRPK2P78362 688 aaKnown RBP20.12■□□□□ 0.81
CDK5RAP3-218ENST00000580391 FAM135BQ49AJ0 1406 aa20.11■□□□□ 0.81
CDK5RAP3-218ENST00000580391 SLC26A8Q96RN1 970 aa20.1■□□□□ 0.81
CDK5RAP3-218ENST00000580391 ATAD2Q6PL18 1390 aa20.1■□□□□ 0.81
CDK5RAP3-218ENST00000580391 PTPRUQ92729 1446 aa20.1■□□□□ 0.81
CDK5RAP3-218ENST00000580391 PNISRQ8TF01 805 aaKnown RBP20.1■□□□□ 0.81
CDK5RAP3-218ENST00000580391 ANKRD36BQ8N2N9 1353 aa20.1■□□□□ 0.81
CDK5RAP3-218ENST00000580391 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.08■□□□□ 0.81
CDK5RAP3-218ENST00000580391 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.81
CDK5RAP3-218ENST00000580391 NINLQ9Y2I6 1382 aa20.08■□□□□ 0.8
CDK5RAP3-218ENST00000580391 XRN1Q8IZH2 1706 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-218ENST00000580391 CDK19Q9BWU1 502 aa20.07■□□□□ 0.8
CDK5RAP3-218ENST00000580391 GTF3C3Q9Y5Q9 886 aa20.07■□□□□ 0.8
CDK5RAP3-218ENST00000580391 A0A1W2PP64 1363 aa20.07■□□□□ 0.8
CDK5RAP3-218ENST00000580391 ADGRB2O60241 1585 aa20.06■□□□□ 0.8
CDK5RAP3-218ENST00000580391 CD163L1Q9NR16 1453 aa20.06■□□□□ 0.8
CDK5RAP3-218ENST00000580391 PPP2R1AP30153 589 aa20.05■□□□□ 0.8
CDK5RAP3-218ENST00000580391 SIRT1Q96EB6 747 aa20.04■□□□□ 0.8
CDK5RAP3-218ENST00000580391 ANKRD26Q9UPS8 1709 aa20.04■□□□□ 0.8
CDK5RAP3-218ENST00000580391 TBX22Q9Y458 520 aa20.03■□□□□ 0.8
CDK5RAP3-218ENST00000580391 KIF20BQ96Q89 1820 aa20.03■□□□□ 0.8
CDK5RAP3-218ENST00000580391 PTCH1Q13635 1447 aa20.01■□□□□ 0.79
CDK5RAP3-218ENST00000580391 WASLO00401 505 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-218ENST00000580391 CHD2O14647 1828 aaKnown RBP20■□□□□ 0.79
CDK5RAP3-218ENST00000580391 ZBED9Q6R2W3 1325 aa20■□□□□ 0.79
CDK5RAP3-218ENST00000580391 TOPAZ1Q8N9V7 1692 aa20■□□□□ 0.79
CDK5RAP3-218ENST00000580391 ATP7BP35670 1465 aa19.99■□□□□ 0.79
CDK5RAP3-218ENST00000580391 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
CDK5RAP3-218ENST00000580391 CGNL1Q0VF96 1302 aa19.99■□□□□ 0.79
CDK5RAP3-218ENST00000580391 AMOTL2Q9Y2J4 779 aa19.99■□□□□ 0.79
CDK5RAP3-218ENST00000580391 AKAP12Q02952 1782 aa19.98■□□□□ 0.79
CDK5RAP3-218ENST00000580391 MON2Q7Z3U7 1717 aa19.97■□□□□ 0.79
CDK5RAP3-218ENST00000580391 ANKLE2Q86XL3 938 aa19.97■□□□□ 0.79
CDK5RAP3-218ENST00000580391 CABP1Q9NZU7 370 aa19.97■□□□□ 0.79
CDK5RAP3-218ENST00000580391 CDC42BPGQ6DT37 1551 aa19.96■□□□□ 0.79
CDK5RAP3-218ENST00000580391 PPIP5K1Q6PFW1 1433 aa19.96■□□□□ 0.79
CDK5RAP3-218ENST00000580391 TERF2IPQ9NYB0 399 aa19.96■□□□□ 0.79
CDK5RAP3-218ENST00000580391 NSD2O96028 1365 aa19.96■□□□□ 0.79
CDK5RAP3-218ENST00000580391 PIK3R4Q99570 1358 aa19.95■□□□□ 0.78
CDK5RAP3-218ENST00000580391 SENP3-EIF4A1A0A087X0R7 540 aa19.94■□□□□ 0.78
CDK5RAP3-218ENST00000580391 MORC1Q86VD1 984 aa19.94■□□□□ 0.78
CDK5RAP3-218ENST00000580391 BLMP54132 1417 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-218ENST00000580391 HDGFL2Q7Z4V5 671 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-218ENST00000580391 PRR36Q9H6K5 1346 aa19.93■□□□□ 0.78
CDK5RAP3-218ENST00000580391 SHPRHQ149N8 1683 aa19.93■□□□□ 0.78
CDK5RAP3-218ENST00000580391 RGPD8O14715 1765 aaPredicted RBP19.93■□□□□ 0.78
CDK5RAP3-218ENST00000580391 NUDT16Q96DE0 195 aaKnown RBP19.92■□□□□ 0.78
CDK5RAP3-218ENST00000580391 NPHP4O75161 1426 aaPredicted RBP19.92■□□□□ 0.78
CDK5RAP3-218ENST00000580391 NCKAP5LQ9HCH0 1330 aa19.92■□□□□ 0.78
CDK5RAP3-218ENST00000580391 NALCNQ8IZF0 1738 aa19.91■□□□□ 0.78
CDK5RAP3-218ENST00000580391 CPSF1Q10570 1443 aaKnown RBP19.91■□□□□ 0.78
CDK5RAP3-218ENST00000580391 TNNT2P45379 298 aaPredicted RBP19.91■□□□□ 0.78
CDK5RAP3-218ENST00000580391 KCNA6P17658 529 aa19.9■□□□□ 0.78
CDK5RAP3-218ENST00000580391 INSRP06213 1382 aa19.9■□□□□ 0.78
CDK5RAP3-218ENST00000580391 NRKQ7Z2Y5 1582 aa19.89■□□□□ 0.77
CDK5RAP3-218ENST00000580391 GGNBP2Q9H3C7 697 aa19.88■□□□□ 0.77
CDK5RAP3-218ENST00000580391 NKTRP30414 1462 aaKnown RBP19.88■□□□□ 0.77
CDK5RAP3-218ENST00000580391 FMN2Q9NZ56 1722 aa19.87■□□□□ 0.77
CDK5RAP3-218ENST00000580391 CCDC61Q9Y6R9 512 aa19.87■□□□□ 0.77
CDK5RAP3-218ENST00000580391 POLR3AO14802 1390 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-218ENST00000580391 FYB1O15117 783 aa19.86■□□□□ 0.77
CDK5RAP3-218ENST00000580391 WDR43Q15061 677 aaKnown RBP eCLIP19.86■□□□□ 0.77
CDK5RAP3-218ENST00000580391 EDC4Q6P2E9 1401 aaKnown RBP19.86■□□□□ 0.77
CDK5RAP3-218ENST00000580391 ADAMTS8Q9UP79 889 aa19.86■□□□□ 0.77
CDK5RAP3-218ENST00000580391 NUTM2FA1L443 756 aa19.85■□□□□ 0.77
CDK5RAP3-218ENST00000580391 NWD1Q149M9 1564 aa19.84■□□□□ 0.77
CDK5RAP3-218ENST00000580391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.83■□□□□ 0.77
CDK5RAP3-218ENST00000580391 MAP2P11137 1827 aaKnown RBP19.81■□□□□ 0.76
CDK5RAP3-218ENST00000580391 MTHFSP49914 203 aa19.81■□□□□ 0.76
CDK5RAP3-218ENST00000580391 SALL2Q9Y467 1007 aaPredicted RBP19.8■□□□□ 0.76
CDK5RAP3-218ENST00000580391 SMG6Q86US8 1419 aaKnown RBP19.78■□□□□ 0.76
CDK5RAP3-218ENST00000580391 COL3A1P02461 1466 aaPredicted RBP19.78■□□□□ 0.76
CDK5RAP3-218ENST00000580391 KDM4FA0A1W2PPD8 638 aa19.77■□□□□ 0.76
CDK5RAP3-218ENST00000580391 NME9Q86XW9 330 aa19.77■□□□□ 0.76
CDK5RAP3-218ENST00000580391 ACEP12821 1306 aa19.77■□□□□ 0.76
CDK5RAP3-218ENST00000580391 ANKARQ7Z5J8 1434 aa19.77■□□□□ 0.76
CDK5RAP3-218ENST00000580391 PLEKHG3A1L390 1219 aa19.77■□□□□ 0.75
CDK5RAP3-218ENST00000580391 USP6P35125 1406 aa19.77■□□□□ 0.75
CDK5RAP3-218ENST00000580391 RBM33Q96EV2 1170 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-218ENST00000580391 ADGRL3Q9HAR2 1447 aa19.75■□□□□ 0.75
CDK5RAP3-218ENST00000580391 STRCP1A6NGW2 1772 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms