RNA–Protein interactions for RNA: ENST00000579245.1

ARHGAP28-209, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 3

Gene ARHGAP28, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-209ENST00000579245 MTMR2Q13614 643 aa9.37□□□□□ -0.91
ARHGAP28-209ENST00000579245 LCE2DQ5TA82 110 aaPredicted RBP9.37□□□□□ -0.91
ARHGAP28-209ENST00000579245 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.37□□□□□ -0.91
ARHGAP28-209ENST00000579245 ZNF777Q9ULD5 760 aaPredicted RBP9.37□□□□□ -0.91
ARHGAP28-209ENST00000579245 USP17L8P0C7I0 530 aa9.36□□□□□ -0.91
ARHGAP28-209ENST00000579245 HRO43593 1189 aa9.35□□□□□ -0.91
ARHGAP28-209ENST00000579245 FNBP4Q8N3X1 1017 aaPredicted RBP9.35□□□□□ -0.91
ARHGAP28-209ENST00000579245 SYMPKQ92797 1274 aaKnown RBP9.35□□□□□ -0.91
ARHGAP28-209ENST00000579245 GDPD2Q9HCC8 539 aa9.35□□□□□ -0.91
ARHGAP28-209ENST00000579245 CTDSPL2Q05D32 466 aa9.34□□□□□ -0.91
ARHGAP28-209ENST00000579245 PUS10Q3MIT2 529 aaKnown RBP9.34□□□□□ -0.91
ARHGAP28-209ENST00000579245 NECTIN2Q92692 538 aa9.34□□□□□ -0.91
ARHGAP28-209ENST00000579245 ANKK1Q8NFD2 765 aa9.33□□□□□ -0.92
ARHGAP28-209ENST00000579245 PRM3Q9NNZ6 103 aa9.33□□□□□ -0.92
ARHGAP28-209ENST00000579245 ACTN4O43707 911 aaKnown RBP9.32□□□□□ -0.92
ARHGAP28-209ENST00000579245 ABL2P42684 1182 aa9.32□□□□□ -0.92
ARHGAP28-209ENST00000579245 PPP4CP60510 307 aa9.32□□□□□ -0.92
ARHGAP28-209ENST00000579245 HELBQ8NG08 1087 aaPredicted RBP9.32□□□□□ -0.92
ARHGAP28-209ENST00000579245 ZNF330Q9Y3S2 320 aaPredicted RBP9.32□□□□□ -0.92
ARHGAP28-209ENST00000579245 CFAP99D6REC4 459 aa9.31□□□□□ -0.92
ARHGAP28-209ENST00000579245 BCAMP50895 628 aa9.31□□□□□ -0.92
ARHGAP28-209ENST00000579245 MORN1Q5T089 497 aa9.31□□□□□ -0.92
ARHGAP28-209ENST00000579245 CCDC82Q8N4S0 544 aa9.31□□□□□ -0.92
ARHGAP28-209ENST00000579245 TBC1D2BQ9UPU7 963 aa9.31□□□□□ -0.92
ARHGAP28-209ENST00000579245 HPS5Q9UPZ3 1129 aa9.3□□□□□ -0.92
ARHGAP28-209ENST00000579245 SLC27A5Q9Y2P5 690 aa9.3□□□□□ -0.92
ARHGAP28-209ENST00000579245 SOWAHBA6NEL2 793 aa9.29□□□□□ -0.92
ARHGAP28-209ENST00000579245 SOCS7O14512 581 aa9.29□□□□□ -0.92
ARHGAP28-209ENST00000579245 WWC1Q8IX03 1113 aa9.29□□□□□ -0.92
ARHGAP28-209ENST00000579245 PRR7Q8TB68 274 aa9.29□□□□□ -0.92
ARHGAP28-209ENST00000579245 LRRN4Q8WUT4 740 aa9.29□□□□□ -0.92
ARHGAP28-209ENST00000579245 WNT2BQ93097 391 aa9.29□□□□□ -0.92
ARHGAP28-209ENST00000579245 PRR14Q9BWN1 585 aa9.29□□□□□ -0.92
ARHGAP28-209ENST00000579245 GJD4Q96KN9 370 aaPredicted RBP9.28□□□□□ -0.92
ARHGAP28-209ENST00000579245 HMX1Q9NP08 348 aaPredicted RBP9.28□□□□□ -0.92
ARHGAP28-209ENST00000579245 TSR3Q9UJK0 312 aaKnown RBP9.27□□□□□ -0.93
ARHGAP28-209ENST00000579245 APLP1P51693 650 aa9.26□□□□□ -0.93
ARHGAP28-209ENST00000579245 Q3C1V9 767 aa9.26□□□□□ -0.93
ARHGAP28-209ENST00000579245 NDUFB9Q9Y6M9 179 aa9.26□□□□□ -0.93
ARHGAP28-209ENST00000579245 BLOC1S3Q6QNY0 202 aa9.25□□□□□ -0.93
ARHGAP28-209ENST00000579245 RNF19BQ6ZMZ0 732 aa9.25□□□□□ -0.93
ARHGAP28-209ENST00000579245 RETREG3Q86VR2 466 aa9.25□□□□□ -0.93
ARHGAP28-209ENST00000579245 CCDC97Q96F63 343 aaPredicted RBP9.24□□□□□ -0.93
ARHGAP28-209ENST00000579245 TRIM34Q9BYJ4 488 aa9.24□□□□□ -0.93
ARHGAP28-209ENST00000579245 PCDHB3Q9Y5E6 796 aa9.24□□□□□ -0.93
ARHGAP28-209ENST00000579245 PER1O15534 1290 aaPredicted RBP9.23□□□□□ -0.93
ARHGAP28-209ENST00000579245 SCUBE3Q8IX30 993 aa9.23□□□□□ -0.93
ARHGAP28-209ENST00000579245 EPS8L1Q8TE68 723 aa9.23□□□□□ -0.93
ARHGAP28-209ENST00000579245 PLSCR2Q9NRY7 297 aa9.23□□□□□ -0.93
ARHGAP28-209ENST00000579245 POM121CA8CG34 1229 aa9.22□□□□□ -0.93
ARHGAP28-209ENST00000579245 WBP1LQ9NX94 342 aa9.22□□□□□ -0.93
ARHGAP28-209ENST00000579245 SERPINA10Q9UK55 444 aa9.22□□□□□ -0.93
ARHGAP28-209ENST00000579245 NR6A1Q15406 480 aa9.21□□□□□ -0.94
ARHGAP28-209ENST00000579245 USB1Q9BQ65 265 aaKnown RBP9.21□□□□□ -0.94
ARHGAP28-209ENST00000579245 NR1I2O75469 434 aa9.2□□□□□ -0.94
ARHGAP28-209ENST00000579245 IRF5Q13568 498 aa9.2□□□□□ -0.94
ARHGAP28-209ENST00000579245 BRICD5Q6PL45 260 aa9.2□□□□□ -0.94
ARHGAP28-209ENST00000579245 CALR3Q96L12 384 aaKnown RBP9.2□□□□□ -0.94
ARHGAP28-209ENST00000579245 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
ARHGAP28-209ENST00000579245 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
ARHGAP28-209ENST00000579245 FMNL1O95466 1100 aaPredicted RBP9.19□□□□□ -0.94
ARHGAP28-209ENST00000579245 DESI1Q6ICB0 168 aa9.18□□□□□ -0.94
ARHGAP28-209ENST00000579245 GLMNQ92990 594 aa9.18□□□□□ -0.94
ARHGAP28-209ENST00000579245 KCTD12Q96CX2 325 aaKnown RBP9.18□□□□□ -0.94
ARHGAP28-209ENST00000579245 SALL2Q9Y467 1007 aaPredicted RBP9.18□□□□□ -0.94
ARHGAP28-209ENST00000579245 COPS2P61201 443 aa9.17□□□□□ -0.94
ARHGAP28-209ENST00000579245 VAC14Q08AM6 782 aa9.17□□□□□ -0.94
ARHGAP28-209ENST00000579245 WASHC4Q2M389 1173 aa9.17□□□□□ -0.94
ARHGAP28-209ENST00000579245 LYPD8Q6UX82 237 aa9.17□□□□□ -0.94
ARHGAP28-209ENST00000579245 THSD4Q6ZMP0 1018 aa9.17□□□□□ -0.94
ARHGAP28-209ENST00000579245 THAP11Q96EK4 314 aa9.17□□□□□ -0.94
ARHGAP28-209ENST00000579245 GPR37L1O60883 481 aa9.16□□□□□ -0.94
ARHGAP28-209ENST00000579245 HDGFL1Q5TGJ6 251 aa9.15□□□□□ -0.94
ARHGAP28-209ENST00000579245 SPSB2Q99619 263 aa9.14□□□□□ -0.95
ARHGAP28-209ENST00000579245 JUNDP17535 347 aa9.13□□□□□ -0.95
ARHGAP28-209ENST00000579245 PTPN5P54829 565 aa9.12□□□□□ -0.95
ARHGAP28-209ENST00000579245 CTHP32929 405 aa9.11□□□□□ -0.95
ARHGAP28-209ENST00000579245 PNMA1Q8ND90 353 aa9.11□□□□□ -0.95
ARHGAP28-209ENST00000579245 ADAMTS19Q8TE59 1207 aa9.11□□□□□ -0.95
ARHGAP28-209ENST00000579245 MAP10Q9P2G4 905 aa9.11□□□□□ -0.95
ARHGAP28-209ENST00000579245 PTPRNQ16849 979 aa9.1□□□□□ -0.95
ARHGAP28-209ENST00000579245 FAM160A2Q8N612 972 aaPredicted RBP9.1□□□□□ -0.95
ARHGAP28-209ENST00000579245 POTEMA6NI47 508 aa9.09□□□□□ -0.95
ARHGAP28-209ENST00000579245 TLL1O43897 1013 aa9.09□□□□□ -0.95
ARHGAP28-209ENST00000579245 F12P00748 615 aaPredicted RBP9.09□□□□□ -0.95
ARHGAP28-209ENST00000579245 MSS51Q4VC12 460 aa9.09□□□□□ -0.95
ARHGAP28-209ENST00000579245 CDAN1Q8IWY9 1227 aa9.09□□□□□ -0.95
ARHGAP28-209ENST00000579245 PRDM9Q9NQV7 894 aa9.09□□□□□ -0.95
ARHGAP28-209ENST00000579245 ZPR1O75312 459 aa9.08□□□□□ -0.96
ARHGAP28-209ENST00000579245 NYAP1Q6ZVC0 841 aa9.08□□□□□ -0.96
ARHGAP28-209ENST00000579245 MTRQ99707 1265 aa9.08□□□□□ -0.96
ARHGAP28-209ENST00000579245 NUDT12Q9BQG2 462 aa9.08□□□□□ -0.96
ARHGAP28-209ENST00000579245 CCNYL3P0C7X3 344 aa9.07□□□□□ -0.96
ARHGAP28-209ENST00000579245 SEMA3FQ13275 785 aa9.07□□□□□ -0.96
ARHGAP28-209ENST00000579245 ALG2Q9H553 416 aa9.07□□□□□ -0.96
ARHGAP28-209ENST00000579245 FKBPLQ9UIM3 349 aa9.07□□□□□ -0.96
ARHGAP28-209ENST00000579245 DXOO77932 396 aaKnown RBP9.06□□□□□ -0.96
ARHGAP28-209ENST00000579245 RFX1P22670 979 aa9.06□□□□□ -0.96
ARHGAP28-209ENST00000579245 POTEGQ6S5H5 508 aa9.06□□□□□ -0.96
ARHGAP28-209ENST00000579245 ADH1BP00325 375 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms