RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 NWD1Q149M9 1564 aa9.58□□□□□ -0.88
PPP4R1-207ENST00000578010 SPATA31E1Q6ZUB1 1445 aa9.58□□□□□ -0.88
PPP4R1-207ENST00000578010 C14orf93Q9H972 538 aaKnown RBP9.58□□□□□ -0.88
PPP4R1-207ENST00000578010 TONSLQ96HA7 1378 aa9.58□□□□□ -0.88
PPP4R1-207ENST00000578010 XIRP1Q702N8 1843 aaKnown RBP9.58□□□□□ -0.88
PPP4R1-207ENST00000578010 SETBP1Q9Y6X0 1596 aa9.58□□□□□ -0.88
PPP4R1-207ENST00000578010 UBAP1LF5GYI3 381 aa9.57□□□□□ -0.88
PPP4R1-207ENST00000578010 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
PPP4R1-207ENST00000578010 CLSPNQ9HAW4 1339 aa9.56□□□□□ -0.88
PPP4R1-207ENST00000578010 LRRC7Q96NW7 1537 aa9.56□□□□□ -0.88
PPP4R1-207ENST00000578010 NKTRP30414 1462 aaKnown RBP9.56□□□□□ -0.88
PPP4R1-207ENST00000578010 ADAMTS13Q76LX8 1427 aa9.56□□□□□ -0.88
PPP4R1-207ENST00000578010 SETD1AO15047 1707 aaKnown RBP9.54□□□□□ -0.88
PPP4R1-207ENST00000578010 METP08581 1390 aa9.54□□□□□ -0.88
PPP4R1-207ENST00000578010 PIP4K2BP78356 416 aa9.54□□□□□ -0.88
PPP4R1-207ENST00000578010 TIMELESSQ9UNS1 1208 aa9.54□□□□□ -0.88
PPP4R1-207ENST00000578010 TRAK1Q9UPV9 953 aa9.54□□□□□ -0.88
PPP4R1-207ENST00000578010 XRN1Q8IZH2 1706 aaKnown RBP9.53□□□□□ -0.88
PPP4R1-207ENST00000578010 ALKQ9UM73 1620 aa9.53□□□□□ -0.88
PPP4R1-207ENST00000578010 NBPF1Q3BBV0 1214 aa9.53□□□□□ -0.88
PPP4R1-207ENST00000578010 CREBZFQ9NS37 354 aa9.53□□□□□ -0.88
PPP4R1-207ENST00000578010 POGKQ9P215 609 aa9.53□□□□□ -0.88
PPP4R1-207ENST00000578010 FBXO3Q9UK99 471 aa9.53□□□□□ -0.88
PPP4R1-207ENST00000578010 LAMC1P11047 1609 aa9.53□□□□□ -0.88
PPP4R1-207ENST00000578010 TMEM94Q12767 1356 aa9.52□□□□□ -0.88
PPP4R1-207ENST00000578010 PIK3R4Q99570 1358 aa9.52□□□□□ -0.88
PPP4R1-207ENST00000578010 TOM1O60784 492 aa9.52□□□□□ -0.89
PPP4R1-207ENST00000578010 SAFB2Q14151 953 aaKnown RBP eCLIP9.52□□□□□ -0.89
PPP4R1-207ENST00000578010 NBPF8Q3BBV2 869 aa9.52□□□□□ -0.89
PPP4R1-207ENST00000578010 CHADLQ6NUI6 762 aa9.52□□□□□ -0.89
PPP4R1-207ENST00000578010 WAPLQ7Z5K2 1190 aa9.52□□□□□ -0.89
PPP4R1-207ENST00000578010 MSH6P52701 1360 aa9.51□□□□□ -0.89
PPP4R1-207ENST00000578010 MYOM2P54296 1465 aa9.51□□□□□ -0.89
PPP4R1-207ENST00000578010 PTPRUQ92729 1446 aa9.5□□□□□ -0.89
PPP4R1-207ENST00000578010 NALCNQ8IZF0 1738 aa9.49□□□□□ -0.89
PPP4R1-207ENST00000578010 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1-207ENST00000578010 ATF3P18847 181 aa9.49□□□□□ -0.89
PPP4R1-207ENST00000578010 PRAM1Q96QH2 718 aa9.49□□□□□ -0.89
PPP4R1-207ENST00000578010 CARD11Q9BXL7 1154 aa9.49□□□□□ -0.89
PPP4R1-207ENST00000578010 C19orf44Q9H6X5 657 aa9.49□□□□□ -0.89
PPP4R1-207ENST00000578010 FARP1Q9Y4F1 1045 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1-207ENST00000578010 PIK3C2GO75747 1445 aa9.48□□□□□ -0.89
PPP4R1-207ENST00000578010 KNDC1Q76NI1 1749 aa9.48□□□□□ -0.89
PPP4R1-207ENST00000578010 SIRT1Q96EB6 747 aa9.48□□□□□ -0.89
PPP4R1-207ENST00000578010 ROBO1Q9Y6N7 1651 aa9.48□□□□□ -0.89
PPP4R1-207ENST00000578010 LRPPRCP42704 1394 aaKnown RBP9.48□□□□□ -0.89
PPP4R1-207ENST00000578010 ROCK2O75116 1388 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-207ENST00000578010 ABCC11Q96J66 1382 aa9.47□□□□□ -0.89
PPP4R1-207ENST00000578010 ASXL1Q8IXJ9 1541 aa9.46□□□□□ -0.89
PPP4R1-207ENST00000578010 NUTM2FA1L443 756 aa9.46□□□□□ -0.9
PPP4R1-207ENST00000578010 PLEKHG5O94827 1062 aa9.46□□□□□ -0.9
PPP4R1-207ENST00000578010 CADPS2Q86UW7 1296 aa9.46□□□□□ -0.9
PPP4R1-207ENST00000578010 PTCH1Q13635 1447 aa9.46□□□□□ -0.9
PPP4R1-207ENST00000578010 HAX1O00165 279 aa9.45□□□□□ -0.9
PPP4R1-207ENST00000578010 HIRIP3Q9BW71 556 aaPredicted RBP9.45□□□□□ -0.9
PPP4R1-207ENST00000578010 SLAIN2Q9P270 581 aa9.45□□□□□ -0.9
PPP4R1-207ENST00000578010 MINK1Q8N4C8 1332 aaPredicted RBP9.45□□□□□ -0.9
PPP4R1-207ENST00000578010 ROBO2Q9HCK4 1378 aa9.45□□□□□ -0.9
PPP4R1-207ENST00000578010 PRAG1Q86YV5 1406 aa9.45□□□□□ -0.9
PPP4R1-207ENST00000578010 YTHDC2Q9H6S0 1430 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-207ENST00000578010 NCOA3Q9Y6Q9 1424 aa9.45□□□□□ -0.9
PPP4R1-207ENST00000578010 NRXN1Q9ULB1 1477 aa9.45□□□□□ -0.9
PPP4R1-207ENST00000578010 C19orf67A6NJJ6 358 aa9.44□□□□□ -0.9
PPP4R1-207ENST00000578010 ADGRL3Q9HAR2 1447 aa9.44□□□□□ -0.9
PPP4R1-207ENST00000578010 PHLPP1O60346 1717 aa9.44□□□□□ -0.9
PPP4R1-207ENST00000578010 MNX1P50219 401 aaPredicted RBP9.43□□□□□ -0.9
PPP4R1-207ENST00000578010 KIAA1210Q9ULL0 1709 aa9.42□□□□□ -0.9
PPP4R1-207ENST00000578010 DCCP43146 1447 aa9.42□□□□□ -0.9
PPP4R1-207ENST00000578010 PLEKHH1Q9ULM0 1364 aa9.42□□□□□ -0.9
PPP4R1-207ENST00000578010 HSPA1LP34931 641 aa9.42□□□□□ -0.9
PPP4R1-207ENST00000578010 MIER1Q8N108 512 aa9.42□□□□□ -0.9
PPP4R1-207ENST00000578010 CENPJQ9HC77 1338 aaPredicted RBP9.41□□□□□ -0.9
PPP4R1-207ENST00000578010 ST20-MTHFSA0A0A6YYL1 179 aa9.41□□□□□ -0.9
PPP4R1-207ENST00000578010 ESCO1Q5FWF5 840 aa9.41□□□□□ -0.9
PPP4R1-207ENST00000578010 CDK19Q9BWU1 502 aa9.41□□□□□ -0.9
PPP4R1-207ENST00000578010 ARHGEF28Q8N1W1 1705 aaKnown RBP9.41□□□□□ -0.9
PPP4R1-207ENST00000578010 WASLO00401 505 aaPredicted RBP9.4□□□□□ -0.9
PPP4R1-207ENST00000578010 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
PPP4R1-207ENST00000578010 ADGRB1O14514 1584 aa9.4□□□□□ -0.9
PPP4R1-207ENST00000578010 CDC42BPGQ6DT37 1551 aa9.4□□□□□ -0.9
PPP4R1-207ENST00000578010 TECPR2O15040 1411 aa9.39□□□□□ -0.91
PPP4R1-207ENST00000578010 FAM135BQ49AJ0 1406 aa9.39□□□□□ -0.91
PPP4R1-207ENST00000578010 TRPM1Q7Z4N2 1603 aa9.39□□□□□ -0.91
PPP4R1-207ENST00000578010 ZEB1P37275 1124 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-207ENST00000578010 ORAI2Q96SN7 254 aa9.39□□□□□ -0.91
PPP4R1-207ENST00000578010 DLC1Q96QB1 1528 aa9.39□□□□□ -0.91
PPP4R1-207ENST00000578010 FMN2Q9NZ56 1722 aa9.39□□□□□ -0.91
PPP4R1-207ENST00000578010 MST1RQ04912 1400 aa9.39□□□□□ -0.91
PPP4R1-207ENST00000578010 SLC24A1O60721 1099 aa9.38□□□□□ -0.91
PPP4R1-207ENST00000578010 EIF4G2P78344 907 aaKnown RBP eCLIP9.38□□□□□ -0.91
PPP4R1-207ENST00000578010 PLCD3Q8N3E9 789 aa9.38□□□□□ -0.91
PPP4R1-207ENST00000578010 CABP2Q9NPB3 220 aa9.38□□□□□ -0.91
PPP4R1-207ENST00000578010 ZBTB47Q9UFB7 747 aaPredicted RBP9.38□□□□□ -0.91
PPP4R1-207ENST00000578010 NHSL1Q5SYE7 1610 aa9.38□□□□□ -0.91
PPP4R1-207ENST00000578010 EVC2Q86UK5 1308 aa9.37□□□□□ -0.91
PPP4R1-207ENST00000578010 PMFBP1Q8TBY8 1022 aa9.37□□□□□ -0.91
PPP4R1-207ENST00000578010 NUDT16Q96DE0 195 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-207ENST00000578010 POLR3GLQ9BT43 218 aa9.37□□□□□ -0.91
PPP4R1-207ENST00000578010 RGPD8O14715 1765 aaPredicted RBP9.37□□□□□ -0.91
PPP4R1-207ENST00000578010 EIF3AQ14152 1382 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms