RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 QRICH2Q9H0J4 1663 aa10.55□□□□□ -0.72
CDH13-214ENST00000569455 CENPJQ9HC77 1338 aaPredicted RBP10.55□□□□□ -0.72
CDH13-214ENST00000569455 NWD1Q149M9 1564 aa10.54□□□□□ -0.72
CDH13-214ENST00000569455 UPF1Q92900 1129 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDH13-214ENST00000569455 SLC26A8Q96RN1 970 aa10.54□□□□□ -0.72
CDH13-214ENST00000569455 NKTRP30414 1462 aaKnown RBP10.54□□□□□ -0.72
CDH13-214ENST00000569455 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
CDH13-214ENST00000569455 NCOA3Q9Y6Q9 1424 aa10.53□□□□□ -0.72
CDH13-214ENST00000569455 TMEM132EQ6IEE7 984 aa10.53□□□□□ -0.72
CDH13-214ENST00000569455 TRAK1Q9UPV9 953 aa10.53□□□□□ -0.72
CDH13-214ENST00000569455 YTHDC2Q9H6S0 1430 aaKnown RBP10.52□□□□□ -0.73
CDH13-214ENST00000569455 DLC1Q96QB1 1528 aa10.51□□□□□ -0.73
CDH13-214ENST00000569455 FAM135BQ49AJ0 1406 aa10.5□□□□□ -0.73
CDH13-214ENST00000569455 KNDC1Q76NI1 1749 aa10.5□□□□□ -0.73
CDH13-214ENST00000569455 SRCAPQ6ZRS2 3230 aa10.5□□□□□ -0.73
CDH13-214ENST00000569455 SIRT1Q96EB6 747 aa10.5□□□□□ -0.73
CDH13-214ENST00000569455 LRPPRCP42704 1394 aaKnown RBP10.5□□□□□ -0.73
CDH13-214ENST00000569455 XRN1Q8IZH2 1706 aaKnown RBP10.5□□□□□ -0.73
CDH13-214ENST00000569455 XIRP1Q702N8 1843 aaKnown RBP10.49□□□□□ -0.73
CDH13-214ENST00000569455 CCER2I3L3R5 266 aa10.49□□□□□ -0.73
CDH13-214ENST00000569455 STK26Q9P289 416 aa10.49□□□□□ -0.73
CDH13-214ENST00000569455 AMOTL2Q9Y2J4 779 aa10.49□□□□□ -0.73
CDH13-214ENST00000569455 METP08581 1390 aa10.49□□□□□ -0.73
CDH13-214ENST00000569455 PTCH1Q13635 1447 aa10.49□□□□□ -0.73
CDH13-214ENST00000569455 POGKQ9P215 609 aa10.48□□□□□ -0.73
CDH13-214ENST00000569455 ABCC11Q96J66 1382 aa10.48□□□□□ -0.73
CDH13-214ENST00000569455 TECPR2O15040 1411 aa10.48□□□□□ -0.73
CDH13-214ENST00000569455 PUS7Q96PZ0 661 aaKnown RBP10.47□□□□□ -0.73
CDH13-214ENST00000569455 EVC2Q86UK5 1308 aa10.47□□□□□ -0.73
CDH13-214ENST00000569455 MYOM1P52179 1685 aa10.47□□□□□ -0.73
CDH13-214ENST00000569455 ROBO1Q9Y6N7 1651 aa10.47□□□□□ -0.73
CDH13-214ENST00000569455 PROSER2Q86WR7 435 aaPredicted RBP10.46□□□□□ -0.73
CDH13-214ENST00000569455 PTPRUQ92729 1446 aa10.46□□□□□ -0.74
CDH13-214ENST00000569455 KTN1Q86UP2 1357 aaKnown RBP10.45□□□□□ -0.74
CDH13-214ENST00000569455 PRAM1Q96QH2 718 aa10.45□□□□□ -0.74
CDH13-214ENST00000569455 DCCP43146 1447 aa10.44□□□□□ -0.74
CDH13-214ENST00000569455 TMEM94Q12767 1356 aa10.44□□□□□ -0.74
CDH13-214ENST00000569455 PRKRIP1Q9H875 184 aaPredicted RBP10.44□□□□□ -0.74
CDH13-214ENST00000569455 TULP4Q9NRJ4 1543 aa10.43□□□□□ -0.74
CDH13-214ENST00000569455 MSH6P52701 1360 aa10.43□□□□□ -0.74
CDH13-214ENST00000569455 C19orf44Q9H6X5 657 aa10.43□□□□□ -0.74
CDH13-214ENST00000569455 PANK3Q9H999 370 aa10.43□□□□□ -0.74
CDH13-214ENST00000569455 JCADQ9P266 1359 aa10.42□□□□□ -0.74
CDH13-214ENST00000569455 NINLQ9Y2I6 1382 aa10.42□□□□□ -0.74
CDH13-214ENST00000569455 SAFB2Q14151 953 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDH13-214ENST00000569455 RALBP1Q15311 655 aa10.42□□□□□ -0.74
CDH13-214ENST00000569455 PHLPP1O60346 1717 aa10.41□□□□□ -0.74
CDH13-214ENST00000569455 ATAD2Q6PL18 1390 aa10.41□□□□□ -0.74
CDH13-214ENST00000569455 MINK1Q8N4C8 1332 aaPredicted RBP10.41□□□□□ -0.74
CDH13-214ENST00000569455 ZNF772Q68DY9 489 aaPredicted RBP10.41□□□□□ -0.74
CDH13-214ENST00000569455 CADPS2Q86UW7 1296 aa10.41□□□□□ -0.74
CDH13-214ENST00000569455 KNSTRNQ9Y448 316 aa10.41□□□□□ -0.74
CDH13-214ENST00000569455 CDK12Q9NYV4 1490 aaPredicted RBP10.41□□□□□ -0.74
CDH13-214ENST00000569455 ROBO2Q9HCK4 1378 aa10.4□□□□□ -0.74
CDH13-214ENST00000569455 PER1O15534 1290 aaPredicted RBP10.4□□□□□ -0.74
CDH13-214ENST00000569455 SRPK2P78362 688 aaKnown RBP10.4□□□□□ -0.74
CDH13-214ENST00000569455 TMC1Q8TDI8 760 aa10.4□□□□□ -0.74
CDH13-214ENST00000569455 ADGRL3Q9HAR2 1447 aa10.4□□□□□ -0.75
CDH13-214ENST00000569455 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.39□□□□□ -0.75
CDH13-214ENST00000569455 ATF3P18847 181 aa10.39□□□□□ -0.75
CDH13-214ENST00000569455 WAPLQ7Z5K2 1190 aa10.39□□□□□ -0.75
CDH13-214ENST00000569455 C14orf37Q86TY3 774 aa10.39□□□□□ -0.75
CDH13-214ENST00000569455 ADGRB2O60241 1585 aa10.39□□□□□ -0.75
CDH13-214ENST00000569455 PLEKHH1Q9ULM0 1364 aa10.39□□□□□ -0.75
CDH13-214ENST00000569455 LRP6O75581 1613 aa10.38□□□□□ -0.75
CDH13-214ENST00000569455 CENPBP07199 599 aaPredicted RBP10.38□□□□□ -0.75
CDH13-214ENST00000569455 YTHDC1Q96MU7 727 aaKnown RBP10.38□□□□□ -0.75
CDH13-214ENST00000569455 CDK19Q9BWU1 502 aa10.38□□□□□ -0.75
CDH13-214ENST00000569455 CABP2Q9NPB3 220 aa10.38□□□□□ -0.75
CDH13-214ENST00000569455 PARD3Q8TEW0 1356 aa10.38□□□□□ -0.75
CDH13-214ENST00000569455 NPC1L1Q9UHC9 1359 aa10.38□□□□□ -0.75
CDH13-214ENST00000569455 MYBBP1AQ9BQG0 1328 aaKnown RBP10.37□□□□□ -0.75
CDH13-214ENST00000569455 USP32Q8NFA0 1604 aa10.37□□□□□ -0.75
CDH13-214ENST00000569455 RXRBP28702 533 aa10.37□□□□□ -0.75
CDH13-214ENST00000569455 CDC42BPGQ6DT37 1551 aa10.37□□□□□ -0.75
CDH13-214ENST00000569455 ANKRD36BQ8N2N9 1353 aa10.37□□□□□ -0.75
CDH13-214ENST00000569455 COL16A1Q07092 1604 aaPredicted RBP10.36□□□□□ -0.75
CDH13-214ENST00000569455 SPATA31A6Q5VVP1 1343 aa10.36□□□□□ -0.75
CDH13-214ENST00000569455 NALCNQ8IZF0 1738 aa10.36□□□□□ -0.75
CDH13-214ENST00000569455 WASLO00401 505 aaPredicted RBP10.36□□□□□ -0.75
CDH13-214ENST00000569455 CNGB1Q14028 1251 aaPredicted RBP10.36□□□□□ -0.75
CDH13-214ENST00000569455 MEX3CQ5U5Q3 659 aaKnown RBP10.36□□□□□ -0.75
CDH13-214ENST00000569455 SLC12A5Q9H2X9 1139 aa10.36□□□□□ -0.75
CDH13-214ENST00000569455 MRS2Q9HD23 443 aa10.36□□□□□ -0.75
CDH13-214ENST00000569455 TERF2IPQ9NYB0 399 aa10.36□□□□□ -0.75
CDH13-214ENST00000569455 SLAIN2Q9P270 581 aa10.36□□□□□ -0.75
CDH13-214ENST00000569455 CC2D1BQ5T0F9 858 aaKnown RBP10.35□□□□□ -0.75
CDH13-214ENST00000569455 NSD3Q9BZ95 1437 aa10.34□□□□□ -0.75
CDH13-214ENST00000569455 AMER1Q5JTC6 1135 aaPredicted RBP10.34□□□□□ -0.75
CDH13-214ENST00000569455 HDGFL2Q7Z4V5 671 aaPredicted RBP10.34□□□□□ -0.75
CDH13-214ENST00000569455 BRD4O60885 1362 aaPredicted RBP10.34□□□□□ -0.75
CDH13-214ENST00000569455 ATP7BP35670 1465 aa10.34□□□□□ -0.75
CDH13-214ENST00000569455 SHPRHQ149N8 1683 aa10.34□□□□□ -0.75
CDH13-214ENST00000569455 ITSN1Q15811 1721 aa10.33□□□□□ -0.76
CDH13-214ENST00000569455 NLRP13Q86W25 1043 aa10.33□□□□□ -0.76
CDH13-214ENST00000569455 RBM33Q96EV2 1170 aaKnown RBP10.33□□□□□ -0.76
CDH13-214ENST00000569455 CARD14Q9BXL6 1004 aa10.33□□□□□ -0.76
CDH13-214ENST00000569455 NSD2O96028 1365 aa10.33□□□□□ -0.76
CDH13-214ENST00000569455 MST1RQ04912 1400 aa10.33□□□□□ -0.76
CDH13-214ENST00000569455 ANKARQ7Z5J8 1434 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms