RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 PUS10Q3MIT2 529 aaKnown RBP10.69□□□□□ -0.7
UBR1-208ENST00000569066 IRF5Q13568 498 aa10.69□□□□□ -0.7
UBR1-208ENST00000569066 ZFRQ96KR1 1074 aaKnown RBP10.69□□□□□ -0.7
UBR1-208ENST00000569066 BHMG1C9JSJ3 638 aaPredicted RBP10.68□□□□□ -0.7
UBR1-208ENST00000569066 LHX8Q68G74 356 aa10.68□□□□□ -0.7
UBR1-208ENST00000569066 GLMNQ92990 594 aa10.68□□□□□ -0.7
UBR1-208ENST00000569066 HDGFP51858 240 aaKnown RBP10.68□□□□□ -0.7
UBR1-208ENST00000569066 ZNF687Q8N1G0 1237 aa10.68□□□□□ -0.7
UBR1-208ENST00000569066 SERPINA10Q9UK55 444 aa10.68□□□□□ -0.7
UBR1-208ENST00000569066 SLF2Q8IX21 1173 aa10.67□□□□□ -0.7
UBR1-208ENST00000569066 ADAMTS19Q8TE59 1207 aa10.67□□□□□ -0.7
UBR1-208ENST00000569066 PER1O15534 1290 aaPredicted RBP10.65□□□□□ -0.7
UBR1-208ENST00000569066 PBX2P40425 430 aa10.65□□□□□ -0.7
UBR1-208ENST00000569066 CALR3Q96L12 384 aaKnown RBP10.65□□□□□ -0.7
UBR1-208ENST00000569066 SOCS7O14512 581 aa10.65□□□□□ -0.7
UBR1-208ENST00000569066 HS3ST6Q96QI5 342 aa10.65□□□□□ -0.7
UBR1-208ENST00000569066 NBPF3Q9H094 633 aa10.65□□□□□ -0.7
UBR1-208ENST00000569066 NDUFB9Q9Y6M9 179 aa10.65□□□□□ -0.7
UBR1-208ENST00000569066 HELBQ8NG08 1087 aaPredicted RBP10.64□□□□□ -0.71
UBR1-208ENST00000569066 ATP6V1AP38606 617 aa10.64□□□□□ -0.71
UBR1-208ENST00000569066 VAC14Q08AM6 782 aa10.62□□□□□ -0.71
UBR1-208ENST00000569066 LAPTM4BQ86VI4 370 aa10.62□□□□□ -0.71
UBR1-208ENST00000569066 PRR7Q8TB68 274 aa10.62□□□□□ -0.71
UBR1-208ENST00000569066 SLC27A5Q9Y2P5 690 aa10.62□□□□□ -0.71
UBR1-208ENST00000569066 SLC4A3P48751 1232 aa10.61□□□□□ -0.71
UBR1-208ENST00000569066 NECTIN2Q92692 538 aa10.61□□□□□ -0.71
UBR1-208ENST00000569066 MRPL50Q8N5N7 158 aaKnown RBP10.61□□□□□ -0.71
UBR1-208ENST00000569066 PDIA4P13667 645 aaKnown RBP10.6□□□□□ -0.71
UBR1-208ENST00000569066 MORN1Q5T089 497 aa10.6□□□□□ -0.71
UBR1-208ENST00000569066 ADGRD1Q6QNK2 874 aa10.6□□□□□ -0.71
UBR1-208ENST00000569066 NR6A1Q15406 480 aa10.6□□□□□ -0.71
UBR1-208ENST00000569066 GRIPAP1Q4V328 841 aa10.6□□□□□ -0.71
UBR1-208ENST00000569066 RNF19BQ6ZMZ0 732 aa10.6□□□□□ -0.71
UBR1-208ENST00000569066 FAM163AQ96GL9 167 aaPredicted RBP10.6□□□□□ -0.71
UBR1-208ENST00000569066 PRM3Q9NNZ6 103 aa10.6□□□□□ -0.71
UBR1-208ENST00000569066 HDGFL1Q5TGJ6 251 aa10.59□□□□□ -0.71
UBR1-208ENST00000569066 BLOC1S3Q6QNY0 202 aa10.59□□□□□ -0.71
UBR1-208ENST00000569066 WWC1Q8IX03 1113 aa10.59□□□□□ -0.71
UBR1-208ENST00000569066 LRCH3Q96II8 777 aa10.59□□□□□ -0.71
UBR1-208ENST00000569066 LSM11P83369 360 aaKnown RBP eCLIP10.58□□□□□ -0.72
UBR1-208ENST00000569066 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
UBR1-208ENST00000569066 RETREG2Q8NC44 543 aa10.58□□□□□ -0.72
UBR1-208ENST00000569066 BCAMP50895 628 aa10.57□□□□□ -0.72
UBR1-208ENST00000569066 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.57□□□□□ -0.72
UBR1-208ENST00000569066 KMT5BQ4FZB7 885 aa10.56□□□□□ -0.72
UBR1-208ENST00000569066 HRO43593 1189 aa10.56□□□□□ -0.72
UBR1-208ENST00000569066 TK2O00142 265 aa10.55□□□□□ -0.72
UBR1-208ENST00000569066 ACTN4O43707 911 aaKnown RBP10.55□□□□□ -0.72
UBR1-208ENST00000569066 RETREG3Q86VR2 466 aa10.55□□□□□ -0.72
UBR1-208ENST00000569066 APLP1P51693 650 aa10.55□□□□□ -0.72
UBR1-208ENST00000569066 RFX1P22670 979 aa10.54□□□□□ -0.72
UBR1-208ENST00000569066 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.53□□□□□ -0.72
UBR1-208ENST00000569066 ANKRD13DQ6ZTN6 518 aa10.52□□□□□ -0.73
UBR1-208ENST00000569066 UCN2Q96RP3 112 aa10.51□□□□□ -0.73
UBR1-208ENST00000569066 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
UBR1-208ENST00000569066 WASHC4Q2M389 1173 aa10.5□□□□□ -0.73
UBR1-208ENST00000569066 CFAP70Q5T0N1 1121 aa10.5□□□□□ -0.73
UBR1-208ENST00000569066 SOWAHBA6NEL2 793 aa10.49□□□□□ -0.73
UBR1-208ENST00000569066 SCUBE3Q8IX30 993 aa10.49□□□□□ -0.73
UBR1-208ENST00000569066 ALG2Q9H553 416 aa10.49□□□□□ -0.73
UBR1-208ENST00000569066 ANKK1Q8NFD2 765 aa10.49□□□□□ -0.73
UBR1-208ENST00000569066 MAP10Q9P2G4 905 aa10.49□□□□□ -0.73
UBR1-208ENST00000569066 PPP4CP60510 307 aa10.48□□□□□ -0.73
UBR1-208ENST00000569066 CARNS1A5YM72 827 aa10.47□□□□□ -0.73
UBR1-208ENST00000569066 USB1Q9BQ65 265 aaKnown RBP10.47□□□□□ -0.73
UBR1-208ENST00000569066 LYPD8Q6UX82 237 aa10.47□□□□□ -0.73
UBR1-208ENST00000569066 THAP11Q96EK4 314 aa10.47□□□□□ -0.73
UBR1-208ENST00000569066 PPP1R12CQ9BZL4 782 aa10.47□□□□□ -0.73
UBR1-208ENST00000569066 Q3C1V9 767 aa10.46□□□□□ -0.73
UBR1-208ENST00000569066 BRICD5Q6PL45 260 aa10.46□□□□□ -0.73
UBR1-208ENST00000569066 WBP1LQ9NX94 342 aa10.46□□□□□ -0.73
UBR1-208ENST00000569066 GOLGA8CPA6NN73 597 aa10.46□□□□□ -0.74
UBR1-208ENST00000569066 DESI1Q6ICB0 168 aa10.46□□□□□ -0.74
UBR1-208ENST00000569066 PCDHB3Q9Y5E6 796 aa10.46□□□□□ -0.74
UBR1-208ENST00000569066 PALM3A6NDB9 673 aaPredicted RBP10.45□□□□□ -0.74
UBR1-208ENST00000569066 AEBP1Q8IUX7 1158 aa10.45□□□□□ -0.74
UBR1-208ENST00000569066 WNT2BQ93097 391 aa10.45□□□□□ -0.74
UBR1-208ENST00000569066 TRAIPQ9BWF2 469 aa10.45□□□□□ -0.74
UBR1-208ENST00000569066 FBXO45P0C2W1 286 aa10.44□□□□□ -0.74
UBR1-208ENST00000569066 PRDM9Q9NQV7 894 aa10.44□□□□□ -0.74
UBR1-208ENST00000569066 TFIP11Q9UBB9 837 aaKnown RBP10.44□□□□□ -0.74
UBR1-208ENST00000569066 TSR3Q9UJK0 312 aaKnown RBP10.44□□□□□ -0.74
UBR1-208ENST00000569066 SRPK2P78362 688 aaKnown RBP10.43□□□□□ -0.74
UBR1-208ENST00000569066 PBXIP1Q96AQ6 731 aa10.43□□□□□ -0.74
UBR1-208ENST00000569066 ZBTB7CA1YPR0 619 aa10.42□□□□□ -0.74
UBR1-208ENST00000569066 F12P00748 615 aaPredicted RBP10.42□□□□□ -0.74
UBR1-208ENST00000569066 LMOD1P29536 600 aaPredicted RBP10.42□□□□□ -0.74
UBR1-208ENST00000569066 COPS2P61201 443 aa10.42□□□□□ -0.74
UBR1-208ENST00000569066 CDCA8Q53HL2 280 aa10.42□□□□□ -0.74
UBR1-208ENST00000569066 PRR14Q9BWN1 585 aa10.41□□□□□ -0.74
UBR1-208ENST00000569066 PPP1R15AO75807 674 aaPredicted RBP10.41□□□□□ -0.74
UBR1-208ENST00000569066 TBC1D9Q6ZT07 1266 aa10.41□□□□□ -0.74
UBR1-208ENST00000569066 STAC3Q96MF2 364 aa10.41□□□□□ -0.74
UBR1-208ENST00000569066 PIK3CDO00329 1044 aa10.4□□□□□ -0.74
UBR1-208ENST00000569066 FMNL1O95466 1100 aaPredicted RBP10.4□□□□□ -0.74
UBR1-208ENST00000569066 TLL1O43897 1013 aa10.4□□□□□ -0.75
UBR1-208ENST00000569066 FKBPLQ9UIM3 349 aa10.4□□□□□ -0.75
UBR1-208ENST00000569066 SEMA3FQ13275 785 aa10.39□□□□□ -0.75
UBR1-208ENST00000569066 SALL2Q9Y467 1007 aaPredicted RBP10.39□□□□□ -0.75
UBR1-208ENST00000569066 FAM160A2Q8N612 972 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms