RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 ERC2O15083 957 aa16.49■□□□□ 0.23
CX3CL1-204ENST00000565912 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.49■□□□□ 0.23
CX3CL1-204ENST00000565912 MTMR7Q9Y216 660 aa16.49■□□□□ 0.23
CX3CL1-204ENST00000565912 HSP90AB4PQ58FF6 505 aa16.49■□□□□ 0.23
CX3CL1-204ENST00000565912 INTS3Q68E01 1043 aaKnown RBP16.49■□□□□ 0.23
CX3CL1-204ENST00000565912 NLRP2Q9NX02 1062 aa16.48■□□□□ 0.23
CX3CL1-204ENST00000565912 ZNF644Q9H582 1327 aaPredicted RBP16.48■□□□□ 0.23
CX3CL1-204ENST00000565912 NUTM2GQ5VZR2 741 aa16.48■□□□□ 0.23
CX3CL1-204ENST00000565912 FAM69CQ0P6D2 419 aa16.47■□□□□ 0.23
CX3CL1-204ENST00000565912 CCDC73Q6ZRK6 1079 aa16.47■□□□□ 0.23
CX3CL1-204ENST00000565912 ZNF771Q7L3S4 317 aaPredicted RBP16.47■□□□□ 0.23
CX3CL1-204ENST00000565912 ATF3P18847 181 aa16.47■□□□□ 0.23
CX3CL1-204ENST00000565912 GNAI1P63096 354 aa16.47■□□□□ 0.23
CX3CL1-204ENST00000565912 LNPKQ9C0E8 428 aa16.47■□□□□ 0.23
CX3CL1-204ENST00000565912 RUNDC1Q96C34 613 aa16.47■□□□□ 0.23
CX3CL1-204ENST00000565912 ZBED9Q6R2W3 1325 aa16.46■□□□□ 0.23
CX3CL1-204ENST00000565912 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.46■□□□□ 0.23
CX3CL1-204ENST00000565912 CFTRP13569 1480 aa16.46■□□□□ 0.23
CX3CL1-204ENST00000565912 ODF2Q5BJF6 829 aa16.46■□□□□ 0.23
CX3CL1-204ENST00000565912 AEBP2Q6ZN18 517 aaPredicted RBP16.46■□□□□ 0.23
CX3CL1-204ENST00000565912 GRIN2BQ13224 1484 aa16.46■□□□□ 0.23
CX3CL1-204ENST00000565912 KDM4AO75164 1064 aa16.46■□□□□ 0.23
CX3CL1-204ENST00000565912 CHMP5Q9NZZ3 219 aa16.46■□□□□ 0.23
CX3CL1-204ENST00000565912 R3HCC1Q9Y3T6 440 aaKnown RBP16.46■□□□□ 0.23
CX3CL1-204ENST00000565912 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
CX3CL1-204ENST00000565912 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
CX3CL1-204ENST00000565912 PHF23Q9BUL5 403 aaPredicted RBP16.45■□□□□ 0.22
CX3CL1-204ENST00000565912 KIF21BO75037 1637 aa16.44■□□□□ 0.22
CX3CL1-204ENST00000565912 RSPH6AQ9H0K4 717 aa16.44■□□□□ 0.22
CX3CL1-204ENST00000565912 IKQ13123 557 aaPredicted RBP16.43■□□□□ 0.22
CX3CL1-204ENST00000565912 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
CX3CL1-204ENST00000565912 ZFYVE27Q5T4F4 411 aa16.43■□□□□ 0.22
CX3CL1-204ENST00000565912 BRMS1Q9HCU9 246 aa16.43■□□□□ 0.22
CX3CL1-204ENST00000565912 UBTFL1P0CB47 393 aaPredicted RBP16.42■□□□□ 0.22
CX3CL1-204ENST00000565912 RUFY1Q96T51 708 aa16.42■□□□□ 0.22
CX3CL1-204ENST00000565912 GGNBP2Q9H3C7 697 aa16.42■□□□□ 0.22
CX3CL1-204ENST00000565912 FGD6Q6ZV73 1430 aa16.42■□□□□ 0.22
CX3CL1-204ENST00000565912 EPS15P42566 896 aa16.42■□□□□ 0.22
CX3CL1-204ENST00000565912 NUCB2P80303 420 aa16.42■□□□□ 0.22
CX3CL1-204ENST00000565912 OFD1O75665 1012 aa16.41■□□□□ 0.22
CX3CL1-204ENST00000565912 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
CX3CL1-204ENST00000565912 TEX35Q5T0J7 233 aa16.41■□□□□ 0.22
CX3CL1-204ENST00000565912 CUX1P39880 1505 aa16.41■□□□□ 0.22
CX3CL1-204ENST00000565912 SYNJ1O43426 1573 aa16.41■□□□□ 0.22
CX3CL1-204ENST00000565912 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
CX3CL1-204ENST00000565912 RRP12Q5JTH9 1297 aaKnown RBP16.4■□□□□ 0.22
CX3CL1-204ENST00000565912 OLFM4Q6UX06 510 aa16.4■□□□□ 0.22
CX3CL1-204ENST00000565912 MNS1Q8NEH6 495 aa16.4■□□□□ 0.22
CX3CL1-204ENST00000565912 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
CX3CL1-204ENST00000565912 XBP1P17861 261 aa16.4■□□□□ 0.22
CX3CL1-204ENST00000565912 PDILTQ8N807 584 aa16.4■□□□□ 0.22
CX3CL1-204ENST00000565912 FAM13BQ9NYF5 915 aa16.39■□□□□ 0.21
CX3CL1-204ENST00000565912 FSD1Q9BTV5 496 aa16.39■□□□□ 0.21
CX3CL1-204ENST00000565912 NLRP6P59044 892 aa16.39■□□□□ 0.21
CX3CL1-204ENST00000565912 C22orf23Q9BZE7 217 aa16.39■□□□□ 0.21
CX3CL1-204ENST00000565912 CABP2Q9NPB3 220 aa16.39■□□□□ 0.21
CX3CL1-204ENST00000565912 CDR1P51861 262 aa16.38■□□□□ 0.21
CX3CL1-204ENST00000565912 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
CX3CL1-204ENST00000565912 AK7Q96M32 723 aa16.38■□□□□ 0.21
CX3CL1-204ENST00000565912 PANK1Q8TE04 598 aa16.38■□□□□ 0.21
CX3CL1-204ENST00000565912 HSP90AB2PQ58FF8 381 aa16.38■□□□□ 0.21
CX3CL1-204ENST00000565912 SDF4Q9BRK5 362 aa16.38■□□□□ 0.21
CX3CL1-204ENST00000565912 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
CX3CL1-204ENST00000565912 ATP2B1P20020 1258 aa16.37■□□□□ 0.21
CX3CL1-204ENST00000565912 TBC1D2BQ9UPU7 963 aa16.37■□□□□ 0.21
CX3CL1-204ENST00000565912 DNAJC2Q99543 621 aaKnown RBP16.36■□□□□ 0.21
CX3CL1-204ENST00000565912 CDC45O75419 566 aa16.36■□□□□ 0.21
CX3CL1-204ENST00000565912 PSMA5P28066 241 aa16.36■□□□□ 0.21
CX3CL1-204ENST00000565912 TMEM132AQ24JP5 1023 aa16.36■□□□□ 0.21
CX3CL1-204ENST00000565912 PRG4Q92954 1404 aaPredicted RBP16.36■□□□□ 0.21
CX3CL1-204ENST00000565912 CNTROBQ8N137 903 aa16.36■□□□□ 0.21
CX3CL1-204ENST00000565912 NINLQ9Y2I6 1382 aa16.36■□□□□ 0.21
CX3CL1-204ENST00000565912 NAT10Q9H0A0 1025 aaKnown RBP16.35■□□□□ 0.21
CX3CL1-204ENST00000565912 SART3Q15020 963 aaKnown RBP16.35■□□□□ 0.21
CX3CL1-204ENST00000565912 TTLL5Q6EMB2 1281 aa16.35■□□□□ 0.21
CX3CL1-204ENST00000565912 RBM42Q9BTD8 480 aaKnown RBP16.35■□□□□ 0.21
CX3CL1-204ENST00000565912 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
CX3CL1-204ENST00000565912 VSIG10Q8N0Z9 540 aa16.35■□□□□ 0.21
CX3CL1-204ENST00000565912 ARGLU1Q9NWB6 273 aaPredicted RBP16.35■□□□□ 0.21
CX3CL1-204ENST00000565912 SURF6O75683 361 aaKnown RBP16.34■□□□□ 0.21
CX3CL1-204ENST00000565912 TMEM132EQ6IEE7 984 aa16.34■□□□□ 0.21
CX3CL1-204ENST00000565912 CLASRPQ8N2M8 674 aaKnown RBP16.34■□□□□ 0.21
CX3CL1-204ENST00000565912 IFT140Q96RY7 1462 aa16.34■□□□□ 0.21
CX3CL1-204ENST00000565912 CCDC173Q0VFZ6 552 aa16.34■□□□□ 0.21
CX3CL1-204ENST00000565912 CAGE1Q8TC20 777 aa16.34■□□□□ 0.21
CX3CL1-204ENST00000565912 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.34■□□□□ 0.21
CX3CL1-204ENST00000565912 ACBD3Q9H3P7 528 aa16.34■□□□□ 0.21
CX3CL1-204ENST00000565912 HMGXB3Q12766 1538 aa16.33■□□□□ 0.21
CX3CL1-204ENST00000565912 TOPBP1Q92547 1522 aa16.33■□□□□ 0.21
CX3CL1-204ENST00000565912 FYCO1Q9BQS8 1478 aa16.32■□□□□ 0.2
CX3CL1-204ENST00000565912 MIA2Q96PC5 1412 aa16.32■□□□□ 0.2
CX3CL1-204ENST00000565912 KIF6Q6ZMV9 814 aa16.32■□□□□ 0.2
CX3CL1-204ENST00000565912 HSP90B2PQ58FF3 399 aa16.32■□□□□ 0.2
CX3CL1-204ENST00000565912 ARHGAP5Q13017 1502 aa16.32■□□□□ 0.2
CX3CL1-204ENST00000565912 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
CX3CL1-204ENST00000565912 CCAR1Q8IX12 1150 aaKnown RBP16.32■□□□□ 0.2
CX3CL1-204ENST00000565912 CCDC30Q5VVM6 783 aa16.32■□□□□ 0.2
CX3CL1-204ENST00000565912 PAF1Q8N7H5 531 aa16.32■□□□□ 0.2
CX3CL1-204ENST00000565912 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.31■□□□□ 0.2
CX3CL1-204ENST00000565912 ABTB2Q8N961 1025 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms