RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 SETD1BQ9UPS6 1966 aaKnown RBP23.31■■□□□ 1.32
HDDC3-206ENST00000561036 DIP2AQ14689 1571 aa23.3■■□□□ 1.32
HDDC3-206ENST00000561036 BRD4O60885 1362 aaPredicted RBP23.29■■□□□ 1.32
HDDC3-206ENST00000561036 CPS1P31327 1500 aa23.28■■□□□ 1.32
HDDC3-206ENST00000561036 TBX22Q9Y458 520 aa23.28■■□□□ 1.32
HDDC3-206ENST00000561036 CCDC184Q52MB2 194 aa23.27■■□□□ 1.32
HDDC3-206ENST00000561036 ATAD2Q6PL18 1390 aa23.27■■□□□ 1.31
HDDC3-206ENST00000561036 AMER1Q5JTC6 1135 aaPredicted RBP23.26■■□□□ 1.31
HDDC3-206ENST00000561036 NLRP13Q86W25 1043 aa23.25■■□□□ 1.31
HDDC3-206ENST00000561036 SAFB2Q14151 953 aaKnown RBP eCLIP23.24■■□□□ 1.31
HDDC3-206ENST00000561036 MINK1Q8N4C8 1332 aaPredicted RBP23.24■■□□□ 1.31
HDDC3-206ENST00000561036 CC2D1BQ5T0F9 858 aaKnown RBP23.22■■□□□ 1.31
HDDC3-206ENST00000561036 TMC1Q8TDI8 760 aa23.22■■□□□ 1.31
HDDC3-206ENST00000561036 SRPK2P78362 688 aaKnown RBP23.21■■□□□ 1.31
HDDC3-206ENST00000561036 CNGB1Q14028 1251 aaPredicted RBP23.21■■□□□ 1.31
HDDC3-206ENST00000561036 USP32Q8NFA0 1604 aa23.2■■□□□ 1.3
HDDC3-206ENST00000561036 ANKRD36BQ8N2N9 1353 aa23.2■■□□□ 1.3
HDDC3-206ENST00000561036 PLEKHH1Q9ULM0 1364 aa23.2■■□□□ 1.3
HDDC3-206ENST00000561036 WAPLQ7Z5K2 1190 aa23.2■■□□□ 1.3
HDDC3-206ENST00000561036 CARD14Q9BXL6 1004 aa23.2■■□□□ 1.3
HDDC3-206ENST00000561036 SLC12A5Q9H2X9 1139 aa23.2■■□□□ 1.3
HDDC3-206ENST00000561036 CABP2Q9NPB3 220 aa23.2■■□□□ 1.3
HDDC3-206ENST00000561036 PIK3R4Q99570 1358 aa23.19■■□□□ 1.3
HDDC3-206ENST00000561036 ANKLE2Q86XL3 938 aa23.19■■□□□ 1.3
HDDC3-206ENST00000561036 CDK19Q9BWU1 502 aa23.19■■□□□ 1.3
HDDC3-206ENST00000561036 PNISRQ8TF01 805 aaKnown RBP23.16■■□□□ 1.3
HDDC3-206ENST00000561036 SLC26A8Q96RN1 970 aa23.16■■□□□ 1.3
HDDC3-206ENST00000561036 PTCH1Q13635 1447 aa23.16■■□□□ 1.3
HDDC3-206ENST00000561036 NSD3Q9BZ95 1437 aa23.16■■□□□ 1.3
HDDC3-206ENST00000561036 ROBO2Q9HCK4 1378 aa23.15■■□□□ 1.3
HDDC3-206ENST00000561036 PTPRUQ92729 1446 aa23.15■■□□□ 1.3
HDDC3-206ENST00000561036 WASLO00401 505 aaPredicted RBP23.14■■□□□ 1.29
HDDC3-206ENST00000561036 FAM9BQ8IZU0 186 aa23.14■■□□□ 1.29
HDDC3-206ENST00000561036 TERF2IPQ9NYB0 399 aa23.14■■□□□ 1.29
HDDC3-206ENST00000561036 ADGRB2O60241 1585 aa23.14■■□□□ 1.29
HDDC3-206ENST00000561036 NSD2O96028 1365 aa23.13■■□□□ 1.29
HDDC3-206ENST00000561036 CGNL1Q0VF96 1302 aa23.11■■□□□ 1.29
HDDC3-206ENST00000561036 AMOTL2Q9Y2J4 779 aa23.11■■□□□ 1.29
HDDC3-206ENST00000561036 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
HDDC3-206ENST00000561036 PPP2R1AP30153 589 aa23.1■■□□□ 1.29
HDDC3-206ENST00000561036 HNRNPUQ00839 825 aaKnown RBP eCLIP23.1■■□□□ 1.29
HDDC3-206ENST00000561036 INSRP06213 1382 aa23.1■■□□□ 1.29
HDDC3-206ENST00000561036 ATP7BP35670 1465 aa23.09■■□□□ 1.29
HDDC3-206ENST00000561036 HDGFL2Q7Z4V5 671 aaPredicted RBP23.08■■□□□ 1.29
HDDC3-206ENST00000561036 A0A1W2PP64 1363 aa23.08■■□□□ 1.29
HDDC3-206ENST00000561036 CD163L1Q9NR16 1453 aa23.07■■□□□ 1.28
HDDC3-206ENST00000561036 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.05■■□□□ 1.28
HDDC3-206ENST00000561036 CABP1Q9NZU7 370 aa23.04■■□□□ 1.28
HDDC3-206ENST00000561036 NPHP4O75161 1426 aaPredicted RBP23.04■■□□□ 1.28
HDDC3-206ENST00000561036 NUDT16Q96DE0 195 aaKnown RBP23.03■■□□□ 1.28
HDDC3-206ENST00000561036 CCDC61Q9Y6R9 512 aa23.03■■□□□ 1.28
HDDC3-206ENST00000561036 MORC1Q86VD1 984 aa23.02■■□□□ 1.28
HDDC3-206ENST00000561036 ZBED9Q6R2W3 1325 aa23.02■■□□□ 1.28
HDDC3-206ENST00000561036 CHD2O14647 1828 aaKnown RBP23.01■■□□□ 1.27
HDDC3-206ENST00000561036 PPIP5K1Q6PFW1 1433 aa23■■□□□ 1.27
HDDC3-206ENST00000561036 CPSF1Q10570 1443 aaKnown RBP22.99■■□□□ 1.27
HDDC3-206ENST00000561036 CDC42BPGQ6DT37 1551 aa22.98■■□□□ 1.27
HDDC3-206ENST00000561036 KCNA6P17658 529 aa22.96■■□□□ 1.27
HDDC3-206ENST00000561036 POLR3AO14802 1390 aaPredicted RBP22.95■■□□□ 1.26
HDDC3-206ENST00000561036 EDC4Q6P2E9 1401 aaKnown RBP22.95■■□□□ 1.26
HDDC3-206ENST00000561036 ZNF692Q9BU19 519 aaPredicted RBP22.95■■□□□ 1.26
HDDC3-206ENST00000561036 ANKRD26Q9UPS8 1709 aa22.95■■□□□ 1.26
HDDC3-206ENST00000561036 TOPAZ1Q8N9V7 1692 aa22.94■■□□□ 1.26
HDDC3-206ENST00000561036 PRR36Q9H6K5 1346 aa22.94■■□□□ 1.26
HDDC3-206ENST00000561036 BLMP54132 1417 aaPredicted RBP22.93■■□□□ 1.26
HDDC3-206ENST00000561036 PLEKHG3A1L390 1219 aa22.93■■□□□ 1.26
HDDC3-206ENST00000561036 NCKAP5LQ9HCH0 1330 aa22.92■■□□□ 1.26
HDDC3-206ENST00000561036 FYB1O15117 783 aa22.92■■□□□ 1.26
HDDC3-206ENST00000561036 KIF20BQ96Q89 1820 aa22.92■■□□□ 1.26
HDDC3-206ENST00000561036 ANKARQ7Z5J8 1434 aa22.91■■□□□ 1.26
HDDC3-206ENST00000561036 AKAP12Q02952 1782 aa22.91■■□□□ 1.26
HDDC3-206ENST00000561036 WDR43Q15061 677 aaKnown RBP eCLIP22.91■■□□□ 1.26
HDDC3-206ENST00000561036 NWD1Q149M9 1564 aa22.91■■□□□ 1.26
HDDC3-206ENST00000561036 ITSN1Q15811 1721 aa22.91■■□□□ 1.26
HDDC3-206ENST00000561036 MON2Q7Z3U7 1717 aa22.91■■□□□ 1.26
HDDC3-206ENST00000561036 KDM4FA0A1W2PPD8 638 aa22.9■■□□□ 1.26
HDDC3-206ENST00000561036 GTF3C3Q9Y5Q9 886 aa22.89■■□□□ 1.25
HDDC3-206ENST00000561036 SCAF1Q9H7N4 1312 aaKnown RBP22.88■■□□□ 1.25
HDDC3-206ENST00000561036 CFAP53Q96M91 514 aa22.87■■□□□ 1.25
HDDC3-206ENST00000561036 GGNBP2Q9H3C7 697 aa22.87■■□□□ 1.25
HDDC3-206ENST00000561036 FMN2Q9NZ56 1722 aa22.85■■□□□ 1.25
HDDC3-206ENST00000561036 ADAMTS8Q9UP79 889 aa22.85■■□□□ 1.25
HDDC3-206ENST00000561036 ADGRL3Q9HAR2 1447 aa22.83■■□□□ 1.25
HDDC3-206ENST00000561036 TNNT2P45379 298 aaPredicted RBP22.83■■□□□ 1.25
HDDC3-206ENST00000561036 MTHFSP49914 203 aa22.83■■□□□ 1.25
HDDC3-206ENST00000561036 NKTRP30414 1462 aaKnown RBP22.83■■□□□ 1.25
HDDC3-206ENST00000561036 ACEP12821 1306 aa22.82■■□□□ 1.24
HDDC3-206ENST00000561036 NALCNQ8IZF0 1738 aa22.82■■□□□ 1.24
HDDC3-206ENST00000561036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.81■■□□□ 1.24
HDDC3-206ENST00000561036 NRKQ7Z2Y5 1582 aa22.8■■□□□ 1.24
HDDC3-206ENST00000561036 USP6P35125 1406 aa22.8■■□□□ 1.24
HDDC3-206ENST00000561036 PDE3BQ13370 1112 aa22.79■■□□□ 1.24
HDDC3-206ENST00000561036 SMG6Q86US8 1419 aaKnown RBP22.78■■□□□ 1.24
HDDC3-206ENST00000561036 TTC21BQ7Z4L5 1316 aa22.78■■□□□ 1.24
HDDC3-206ENST00000561036 SHPRHQ149N8 1683 aa22.77■■□□□ 1.24
HDDC3-206ENST00000561036 SSH2Q76I76 1423 aa22.77■■□□□ 1.24
HDDC3-206ENST00000561036 NGEFQ8N5V2 710 aa22.77■■□□□ 1.24
HDDC3-206ENST00000561036 LMTK3Q96Q04 1460 aa22.77■■□□□ 1.24
HDDC3-206ENST00000561036 TTC21AQ8NDW8 1320 aa22.77■■□□□ 1.24
HDDC3-206ENST00000561036 AATKQ6ZMQ8 1374 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms