RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 NEXMIFQ5QGS0 1516 aa11.45□□□□□ -0.58
CCDC33-209ENST00000560565 NKTRP30414 1462 aaKnown RBP11.44□□□□□ -0.58
CCDC33-209ENST00000560565 RGL3Q3MIN7 710 aa11.44□□□□□ -0.58
CCDC33-209ENST00000560565 DCAF11Q8TEB1 546 aa11.44□□□□□ -0.58
CCDC33-209ENST00000560565 USP35Q9P2H5 1018 aa11.44□□□□□ -0.58
CCDC33-209ENST00000560565 NWD1Q149M9 1564 aa11.44□□□□□ -0.58
CCDC33-209ENST00000560565 ROCK2O75116 1388 aaKnown RBP11.43□□□□□ -0.58
CCDC33-209ENST00000560565 NBPF8Q3BBV2 869 aa11.43□□□□□ -0.58
CCDC33-209ENST00000560565 ZRANB1Q9UGI0 708 aa11.43□□□□□ -0.58
CCDC33-209ENST00000560565 AMOTL2Q9Y2J4 779 aa11.43□□□□□ -0.58
CCDC33-209ENST00000560565 SMG6Q86US8 1419 aaKnown RBP11.43□□□□□ -0.58
CCDC33-209ENST00000560565 GPRASP1Q5JY77 1395 aa11.42□□□□□ -0.58
CCDC33-209ENST00000560565 MSH5O43196 834 aa11.42□□□□□ -0.58
CCDC33-209ENST00000560565 C14orf37Q86TY3 774 aa11.42□□□□□ -0.58
CCDC33-209ENST00000560565 NRXN1Q9ULB1 1477 aa11.42□□□□□ -0.58
CCDC33-209ENST00000560565 NRXN3Q9Y4C0 1643 aa11.42□□□□□ -0.58
CCDC33-209ENST00000560565 SENP3-EIF4A1A0A087X0R7 540 aa11.41□□□□□ -0.58
CCDC33-209ENST00000560565 HSPA5P11021 654 aaKnown RBP11.41□□□□□ -0.58
CCDC33-209ENST00000560565 PRKRIP1Q9H875 184 aaPredicted RBP11.41□□□□□ -0.58
CCDC33-209ENST00000560565 METP08581 1390 aa11.41□□□□□ -0.58
CCDC33-209ENST00000560565 MSH6P52701 1360 aa11.41□□□□□ -0.58
CCDC33-209ENST00000560565 CCDC7Q96M83 1385 aa11.41□□□□□ -0.58
CCDC33-209ENST00000560565 MRS2Q9HD23 443 aa11.4□□□□□ -0.58
CCDC33-209ENST00000560565 WASHC2AQ641Q2 1341 aa11.39□□□□□ -0.59
CCDC33-209ENST00000560565 DEKP35659 375 aaKnown RBP11.39□□□□□ -0.59
CCDC33-209ENST00000560565 PTPRUQ92729 1446 aa11.39□□□□□ -0.59
CCDC33-209ENST00000560565 KDM2AQ9Y2K7 1162 aa11.39□□□□□ -0.59
CCDC33-209ENST00000560565 NCOA3Q9Y6Q9 1424 aa11.39□□□□□ -0.59
CCDC33-209ENST00000560565 YY1P25490 414 aa11.38□□□□□ -0.59
CCDC33-209ENST00000560565 IPO9Q96P70 1041 aaKnown RBP11.38□□□□□ -0.59
CCDC33-209ENST00000560565 C19orf44Q9H6X5 657 aa11.38□□□□□ -0.59
CCDC33-209ENST00000560565 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
CCDC33-209ENST00000560565 ADGRF5Q8IZF2 1346 aa11.37□□□□□ -0.59
CCDC33-209ENST00000560565 ATF3P18847 181 aa11.37□□□□□ -0.59
CCDC33-209ENST00000560565 SLAIN2Q9P270 581 aa11.37□□□□□ -0.59
CCDC33-209ENST00000560565 PCDH10Q9P2E7 1040 aa11.37□□□□□ -0.59
CCDC33-209ENST00000560565 NUDCQ9Y266 331 aa11.37□□□□□ -0.59
CCDC33-209ENST00000560565 USP47Q96K76 1375 aa11.37□□□□□ -0.59
CCDC33-209ENST00000560565 XRN1Q8IZH2 1706 aaKnown RBP11.36□□□□□ -0.59
CCDC33-209ENST00000560565 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
CCDC33-209ENST00000560565 FAM135BQ49AJ0 1406 aa11.35□□□□□ -0.59
CCDC33-209ENST00000560565 PPM1GO15355 546 aaPredicted RBP11.35□□□□□ -0.59
CCDC33-209ENST00000560565 CADPS2Q86UW7 1296 aa11.35□□□□□ -0.59
CCDC33-209ENST00000560565 CCDC136Q96JN2 1154 aa11.35□□□□□ -0.59
CCDC33-209ENST00000560565 CARD11Q9BXL7 1154 aa11.35□□□□□ -0.59
CCDC33-209ENST00000560565 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.35□□□□□ -0.59
CCDC33-209ENST00000560565 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
CCDC33-209ENST00000560565 TCERG1O14776 1098 aaKnown RBP11.34□□□□□ -0.59
CCDC33-209ENST00000560565 MS4A1P11836 297 aa11.34□□□□□ -0.59
CCDC33-209ENST00000560565 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
CCDC33-209ENST00000560565 PDE3BQ13370 1112 aa11.33□□□□□ -0.6
CCDC33-209ENST00000560565 DDRGK1Q96HY6 314 aa11.33□□□□□ -0.6
CCDC33-209ENST00000560565 ROBO1Q9Y6N7 1651 aa11.33□□□□□ -0.6
CCDC33-209ENST00000560565 INSRP06213 1382 aa11.32□□□□□ -0.6
CCDC33-209ENST00000560565 LRP5O75197 1615 aa11.31□□□□□ -0.6
CCDC33-209ENST00000560565 EIF3AQ14152 1382 aaKnown RBP11.31□□□□□ -0.6
CCDC33-209ENST00000560565 TMEM132EQ6IEE7 984 aa11.31□□□□□ -0.6
CCDC33-209ENST00000560565 HIRIP3Q9BW71 556 aaPredicted RBP11.31□□□□□ -0.6
CCDC33-209ENST00000560565 C14orf93Q9H972 538 aaKnown RBP11.31□□□□□ -0.6
CCDC33-209ENST00000560565 STK26Q9P289 416 aa11.31□□□□□ -0.6
CCDC33-209ENST00000560565 ROBO2Q9HCK4 1378 aa11.3□□□□□ -0.6
CCDC33-209ENST00000560565 ARHGEF28Q8N1W1 1705 aaKnown RBP11.3□□□□□ -0.6
CCDC33-209ENST00000560565 DCCP43146 1447 aa11.3□□□□□ -0.6
CCDC33-209ENST00000560565 PTCH1Q13635 1447 aa11.3□□□□□ -0.6
CCDC33-209ENST00000560565 FAM9BQ8IZU0 186 aa11.3□□□□□ -0.6
CCDC33-209ENST00000560565 ADGRB1O14514 1584 aa11.29□□□□□ -0.6
CCDC33-209ENST00000560565 ADGRL3Q9HAR2 1447 aa11.29□□□□□ -0.6
CCDC33-209ENST00000560565 CFAP70Q5T0N1 1121 aa11.29□□□□□ -0.6
CCDC33-209ENST00000560565 LRPPRCP42704 1394 aaKnown RBP11.28□□□□□ -0.6
CCDC33-209ENST00000560565 QRICH2Q9H0J4 1663 aa11.28□□□□□ -0.6
CCDC33-209ENST00000560565 RALBP1Q15311 655 aa11.28□□□□□ -0.6
CCDC33-209ENST00000560565 NBPF1Q3BBV0 1214 aa11.28□□□□□ -0.6
CCDC33-209ENST00000560565 KNDC1Q76NI1 1749 aa11.28□□□□□ -0.6
CCDC33-209ENST00000560565 ABCC11Q96J66 1382 aa11.28□□□□□ -0.6
CCDC33-209ENST00000560565 NALCNQ8IZF0 1738 aa11.27□□□□□ -0.61
CCDC33-209ENST00000560565 B4GALNT3Q6L9W6 998 aa11.27□□□□□ -0.61
CCDC33-209ENST00000560565 WAPLQ7Z5K2 1190 aa11.27□□□□□ -0.61
CCDC33-209ENST00000560565 BRD4O60885 1362 aaPredicted RBP11.27□□□□□ -0.61
CCDC33-209ENST00000560565 SBNO2Q9Y2G9 1366 aa11.27□□□□□ -0.61
CCDC33-209ENST00000560565 YTHDC2Q9H6S0 1430 aaKnown RBP11.26□□□□□ -0.61
CCDC33-209ENST00000560565 PHLPP1O60346 1717 aa11.26□□□□□ -0.61
CCDC33-209ENST00000560565 BRINP3Q76B58 766 aa11.26□□□□□ -0.61
CCDC33-209ENST00000560565 KIF7Q2M1P5 1343 aa11.26□□□□□ -0.61
CCDC33-209ENST00000560565 TECPR2O15040 1411 aa11.26□□□□□ -0.61
CCDC33-209ENST00000560565 MST1RQ04912 1400 aa11.26□□□□□ -0.61
CCDC33-209ENST00000560565 ST20-MTHFSA0A0A6YYL1 179 aa11.25□□□□□ -0.61
CCDC33-209ENST00000560565 IRX6P78412 446 aaPredicted RBP11.25□□□□□ -0.61
CCDC33-209ENST00000560565 SIRT1Q96EB6 747 aa11.25□□□□□ -0.61
CCDC33-209ENST00000560565 ASXL1Q8IXJ9 1541 aa11.25□□□□□ -0.61
CCDC33-209ENST00000560565 CEP350Q5VT06 3117 aa11.24□□□□□ -0.61
CCDC33-209ENST00000560565 CDCA8Q53HL2 280 aa11.23□□□□□ -0.61
CCDC33-209ENST00000560565 TMC1Q8TDI8 760 aa11.23□□□□□ -0.61
CCDC33-209ENST00000560565 DLC1Q96QB1 1528 aa11.23□□□□□ -0.61
CCDC33-209ENST00000560565 TMF1P82094 1093 aa11.22□□□□□ -0.61
CCDC33-209ENST00000560565 C1orf167Q5SNV9 1468 aa11.22□□□□□ -0.61
CCDC33-209ENST00000560565 PRAM1Q96QH2 718 aa11.22□□□□□ -0.61
CCDC33-209ENST00000560565 CDK12Q9NYV4 1490 aaPredicted RBP11.22□□□□□ -0.61
CCDC33-209ENST00000560565 POGKQ9P215 609 aa11.22□□□□□ -0.61
CCDC33-209ENST00000560565 JCADQ9P266 1359 aa11.22□□□□□ -0.61
CCDC33-209ENST00000560565 PLEKHH1Q9ULM0 1364 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms