RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-208ENST00000558943 ZNF598Q86UK7 904 aaKnown RBP9.15□□□□□ -0.94
SPG21-208ENST00000558943 DDX11L8A8MPP1 907 aa9.14□□□□□ -0.95
SPG21-208ENST00000558943 GCGRP47871 477 aa9.14□□□□□ -0.95
SPG21-208ENST00000558943 GRIPAP1Q4V328 841 aa9.14□□□□□ -0.95
SPG21-208ENST00000558943 MORN1Q5T089 497 aa9.14□□□□□ -0.95
SPG21-208ENST00000558943 SPSB2Q99619 263 aa9.14□□□□□ -0.95
SPG21-208ENST00000558943 AQRO60306 1485 aaKnown RBP eCLIP9.14□□□□□ -0.95
SPG21-208ENST00000558943 CHMP7Q8WUX9 453 aaPredicted RBP9.13□□□□□ -0.95
SPG21-208ENST00000558943 LMOD2Q6P5Q4 547 aa9.12□□□□□ -0.95
SPG21-208ENST00000558943 FMNL1O95466 1100 aaPredicted RBP9.11□□□□□ -0.95
SPG21-208ENST00000558943 FUT2Q10981 343 aa9.11□□□□□ -0.95
SPG21-208ENST00000558943 PUS10Q3MIT2 529 aaKnown RBP9.11□□□□□ -0.95
SPG21-208ENST00000558943 MINK1Q8N4C8 1332 aaPredicted RBP9.1□□□□□ -0.95
SPG21-208ENST00000558943 EMID1Q96A84 441 aaPredicted RBP9.1□□□□□ -0.95
SPG21-208ENST00000558943 THAP11Q96EK4 314 aa9.1□□□□□ -0.95
SPG21-208ENST00000558943 PHOX2BQ99453 314 aa9.1□□□□□ -0.95
SPG21-208ENST00000558943 LCE2BO14633 110 aa9.09□□□□□ -0.95
SPG21-208ENST00000558943 RPIAP49247 311 aa9.09□□□□□ -0.95
SPG21-208ENST00000558943 ZNF697Q5TEC3 545 aa9.09□□□□□ -0.95
SPG21-208ENST00000558943 WIZO95785 1651 aa9.09□□□□□ -0.95
SPG21-208ENST00000558943 IRF6O14896 467 aa9.08□□□□□ -0.96
SPG21-208ENST00000558943 DGAT1O75907 488 aa9.08□□□□□ -0.96
SPG21-208ENST00000558943 MSS51Q4VC12 460 aa9.08□□□□□ -0.96
SPG21-208ENST00000558943 LIAT1Q6ZQX7 453 aa9.08□□□□□ -0.96
SPG21-208ENST00000558943 TRIM67Q6ZTA4 783 aa9.08□□□□□ -0.96
SPG21-208ENST00000558943 EIF4G3O43432 1585 aaKnown RBP9.07□□□□□ -0.96
SPG21-208ENST00000558943 ABCC8Q09428 1581 aa9.07□□□□□ -0.96
SPG21-208ENST00000558943 TOPBP1Q92547 1522 aa9.07□□□□□ -0.96
SPG21-208ENST00000558943 PPEF1O14829 653 aaPredicted RBP9.07□□□□□ -0.96
SPG21-208ENST00000558943 Q3C1V9 767 aa9.07□□□□□ -0.96
SPG21-208ENST00000558943 CD46P15529 392 aa9.06□□□□□ -0.96
SPG21-208ENST00000558943 USP46P62068 366 aa9.06□□□□□ -0.96
SPG21-208ENST00000558943 SLC27A5Q9Y2P5 690 aa9.06□□□□□ -0.96
SPG21-208ENST00000558943 CHD1O14646 1710 aa9.05□□□□□ -0.96
SPG21-208ENST00000558943 GDF9O60383 454 aa9.05□□□□□ -0.96
SPG21-208ENST00000558943 BRICD5Q6PL45 260 aa9.05□□□□□ -0.96
SPG21-208ENST00000558943 TDRD9Q8NDG6 1382 aaKnown RBP9.04□□□□□ -0.96
SPG21-208ENST00000558943 PKDCCQ504Y2 493 aa9.04□□□□□ -0.96
SPG21-208ENST00000558943 NLRP7Q8WX94 980 aa9.04□□□□□ -0.96
SPG21-208ENST00000558943 GAPVD1Q14C86 1478 aa9.03□□□□□ -0.96
SPG21-208ENST00000558943 PLA2G2CQ5R387 149 aa9.03□□□□□ -0.96
SPG21-208ENST00000558943 CD2BP2O95400 341 aaKnown RBP9.02□□□□□ -0.97
SPG21-208ENST00000558943 FAM160A2Q8N612 972 aaPredicted RBP9.02□□□□□ -0.97
SPG21-208ENST00000558943 FCF1Q9Y324 198 aaKnown RBP9.02□□□□□ -0.97
SPG21-208ENST00000558943 KDM4AO75164 1064 aa9.01□□□□□ -0.97
SPG21-208ENST00000558943 CLCN1P35523 988 aa9.01□□□□□ -0.97
SPG21-208ENST00000558943 SYNJ1O43426 1573 aa9□□□□□ -0.97
SPG21-208ENST00000558943 CCDC102AQ96A19 550 aa9□□□□□ -0.97
SPG21-208ENST00000558943 GPCPD1Q9NPB8 672 aa9□□□□□ -0.97
SPG21-208ENST00000558943 CLASP1Q7Z460 1538 aa9□□□□□ -0.97
SPG21-208ENST00000558943 MMP16P51512 607 aa8.99□□□□□ -0.97
SPG21-208ENST00000558943 SOGA1O94964 1423 aa8.98□□□□□ -0.97
SPG21-208ENST00000558943 SNAPC4Q5SXM2 1469 aa8.98□□□□□ -0.97
SPG21-208ENST00000558943 ZBTB24O43167 697 aaPredicted RBP8.98□□□□□ -0.97
SPG21-208ENST00000558943 MDM2Q00987 491 aaPredicted RBP8.98□□□□□ -0.97
SPG21-208ENST00000558943 MYT1Q01538 1121 aa8.98□□□□□ -0.97
SPG21-208ENST00000558943 RNF19BQ6ZMZ0 732 aa8.98□□□□□ -0.97
SPG21-208ENST00000558943 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.98□□□□□ -0.97
SPG21-208ENST00000558943 FAM69CQ0P6D2 419 aa8.97□□□□□ -0.97
SPG21-208ENST00000558943 ZNF787Q6DD87 383 aa8.97□□□□□ -0.97
SPG21-208ENST00000558943 USB1Q9BQ65 265 aaKnown RBP8.97□□□□□ -0.97
SPG21-208ENST00000558943 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
SPG21-208ENST00000558943 TARBP1Q13395 1621 aaKnown RBP8.97□□□□□ -0.97
SPG21-208ENST00000558943 RAD54L2Q9Y4B4 1467 aa8.96□□□□□ -0.97
SPG21-208ENST00000558943 FAM187AA6NFU0 413 aa8.96□□□□□ -0.98
SPG21-208ENST00000558943 TNFRSF10AO00220 468 aa8.96□□□□□ -0.98
SPG21-208ENST00000558943 PKD2L1Q9P0L9 805 aa8.96□□□□□ -0.98
SPG21-208ENST00000558943 TOP2AP11388 1531 aaKnown RBP8.95□□□□□ -0.98
SPG21-208ENST00000558943 HOXA2O43364 376 aa8.95□□□□□ -0.98
SPG21-208ENST00000558943 KRI1Q8N9T8 703 aaKnown RBP8.95□□□□□ -0.98
SPG21-208ENST00000558943 FAM217BQ9NTX9 383 aaPredicted RBP8.95□□□□□ -0.98
SPG21-208ENST00000558943 POLA1P09884 1462 aaPredicted RBP8.95□□□□□ -0.98
SPG21-208ENST00000558943 DXOO77932 396 aaKnown RBP8.94□□□□□ -0.98
SPG21-208ENST00000558943 CRIPAKQ8N1N5 446 aa8.94□□□□□ -0.98
SPG21-208ENST00000558943 PRDM9Q9NQV7 894 aa8.94□□□□□ -0.98
SPG21-208ENST00000558943 MAGI1Q96QZ7 1491 aaPredicted RBP8.94□□□□□ -0.98
SPG21-208ENST00000558943 TOR4AQ9NXH8 423 aa8.93□□□□□ -0.98
SPG21-208ENST00000558943 CCDC88BA6NC98 1476 aa8.93□□□□□ -0.98
SPG21-208ENST00000558943 SYNJ2O15056 1496 aa8.93□□□□□ -0.98
SPG21-208ENST00000558943 GRIN2BQ13224 1484 aa8.92□□□□□ -0.98
SPG21-208ENST00000558943 AVPP01185 164 aa8.92□□□□□ -0.98
SPG21-208ENST00000558943 FOXC1Q12948 553 aa8.91□□□□□ -0.98
SPG21-208ENST00000558943 CTC1Q2NKJ3 1217 aa8.91□□□□□ -0.98
SPG21-208ENST00000558943 NUTM1Q86Y26 1132 aa8.91□□□□□ -0.98
SPG21-208ENST00000558943 CYP4X1Q8N118 509 aa8.91□□□□□ -0.98
SPG21-208ENST00000558943 FBXO41Q8TF61 875 aa8.91□□□□□ -0.98
SPG21-208ENST00000558943 WNT7AO00755 349 aa8.9□□□□□ -0.98
SPG21-208ENST00000558943 BARGINQ6ZT62 677 aa8.9□□□□□ -0.98
SPG21-208ENST00000558943 REPIN1Q9BWE0 567 aaKnown RBP8.9□□□□□ -0.98
SPG21-208ENST00000558943 TRIM32Q13049 653 aa8.89□□□□□ -0.99
SPG21-208ENST00000558943 ZMYND10O75800 440 aa8.88□□□□□ -0.99
SPG21-208ENST00000558943 SMCPP49901 116 aaPredicted RBP8.88□□□□□ -0.99
SPG21-208ENST00000558943 AMHR2Q16671 573 aa8.88□□□□□ -0.99
SPG21-208ENST00000558943 RETREG3Q86VR2 466 aa8.88□□□□□ -0.99
SPG21-208ENST00000558943 AAASQ9NRG9 546 aa8.88□□□□□ -0.99
SPG21-208ENST00000558943 JUNDP17535 347 aa8.87□□□□□ -0.99
SPG21-208ENST00000558943 WNT7BP56706 349 aa8.87□□□□□ -0.99
SPG21-208ENST00000558943 PRDM2Q13029 1718 aa8.87□□□□□ -0.99
SPG21-208ENST00000558943 DIXDC1Q155Q3 683 aa8.85□□□□□ -0.99
SPG21-208ENST00000558943 SNIP1Q8TAD8 396 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms