RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-208ENST00000558943 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
SPG21-208ENST00000558943 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
SPG21-208ENST00000558943 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
SPG21-208ENST00000558943 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
SPG21-208ENST00000558943 FOXD1Q16676 465 aa19.08■□□□□ 0.64
SPG21-208ENST00000558943 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.56
SPG21-208ENST00000558943 MSH5O43196 834 aa17.97■□□□□ 0.47
SPG21-208ENST00000558943 PIAS4Q8N2W9 510 aaPredicted RBP17.89■□□□□ 0.45
SPG21-208ENST00000558943 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
SPG21-208ENST00000558943 ADRA2BP18089 450 aa17.83■□□□□ 0.44
SPG21-208ENST00000558943 POTEDQ86YR6 584 aa17.17■□□□□ 0.34
SPG21-208ENST00000558943 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
SPG21-208ENST00000558943 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
SPG21-208ENST00000558943 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
SPG21-208ENST00000558943 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
SPG21-208ENST00000558943 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
SPG21-208ENST00000558943 HOXD11P31277 338 aaPredicted RBP15.81■□□□□ 0.12
SPG21-208ENST00000558943 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
SPG21-208ENST00000558943 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
SPG21-208ENST00000558943 DCAF8L1A6NGE4 600 aa15.55■□□□□ 0.08
SPG21-208ENST00000558943 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
SPG21-208ENST00000558943 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
SPG21-208ENST00000558943 RNF39Q9H2S5 420 aa15.27■□□□□ 0.04
SPG21-208ENST00000558943 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
SPG21-208ENST00000558943 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
SPG21-208ENST00000558943 KCNA4P22459 653 aa15.12■□□□□ 0.01
SPG21-208ENST00000558943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02■□□□□ -0
SPG21-208ENST00000558943 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
SPG21-208ENST00000558943 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
SPG21-208ENST00000558943 APLP2Q06481 763 aa14.51□□□□□ -0.09
SPG21-208ENST00000558943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.5□□□□□ -0.09
SPG21-208ENST00000558943 HNRNPUL2Q1KMD3 747 aaKnown RBP14.5□□□□□ -0.09
SPG21-208ENST00000558943 CAPN15O75808 1086 aa14.41□□□□□ -0.1
SPG21-208ENST00000558943 SAMD1Q6SPF0 538 aaPredicted RBP14.38□□□□□ -0.11
SPG21-208ENST00000558943 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
SPG21-208ENST00000558943 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
SPG21-208ENST00000558943 DSG3P32926 999 aa14.32□□□□□ -0.12
SPG21-208ENST00000558943 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
SPG21-208ENST00000558943 MYCNP04198 464 aaPredicted RBP14.29□□□□□ -0.12
SPG21-208ENST00000558943 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
SPG21-208ENST00000558943 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
SPG21-208ENST00000558943 ABCB7O75027 752 aa14.01□□□□□ -0.17
SPG21-208ENST00000558943 ZBTB22O15209 634 aa13.86□□□□□ -0.19
SPG21-208ENST00000558943 POLA2Q14181 598 aa13.84□□□□□ -0.19
SPG21-208ENST00000558943 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
SPG21-208ENST00000558943 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
SPG21-208ENST00000558943 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
SPG21-208ENST00000558943 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
SPG21-208ENST00000558943 POTEHQ6S545 545 aa13.51□□□□□ -0.25
SPG21-208ENST00000558943 AKT1S1Q96B36 256 aa13.46□□□□□ -0.25
SPG21-208ENST00000558943 FBLN2P98095 1184 aa13.4□□□□□ -0.26
SPG21-208ENST00000558943 OSCARQ8IYS5 282 aa13.39□□□□□ -0.27
SPG21-208ENST00000558943 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
SPG21-208ENST00000558943 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
SPG21-208ENST00000558943 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
SPG21-208ENST00000558943 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
SPG21-208ENST00000558943 SPDYE2Q495Y8 402 aa13.29□□□□□ -0.28
SPG21-208ENST00000558943 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
SPG21-208ENST00000558943 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.29
SPG21-208ENST00000558943 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
SPG21-208ENST00000558943 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
SPG21-208ENST00000558943 PITPNM1O00562 1244 aa13.08□□□□□ -0.32
SPG21-208ENST00000558943 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
SPG21-208ENST00000558943 SPDYE1Q8NFV5 336 aaPredicted RBP13.02□□□□□ -0.33
SPG21-208ENST00000558943 FXR2P51116 673 aaKnown RBP eCLIP13□□□□□ -0.33
SPG21-208ENST00000558943 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
SPG21-208ENST00000558943 CLEC11AQ9Y240 323 aa12.86□□□□□ -0.35
SPG21-208ENST00000558943 PABPN1Q86U42 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
SPG21-208ENST00000558943 PRKAR2AP13861 404 aaKnown RBP12.75□□□□□ -0.37
SPG21-208ENST00000558943 SP7Q8TDD2 431 aaPredicted RBP12.75□□□□□ -0.37
SPG21-208ENST00000558943 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
SPG21-208ENST00000558943 HAX1O00165 279 aa12.72□□□□□ -0.37
SPG21-208ENST00000558943 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
SPG21-208ENST00000558943 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
SPG21-208ENST00000558943 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
SPG21-208ENST00000558943 CHADLQ6NUI6 762 aa12.55□□□□□ -0.4
SPG21-208ENST00000558943 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
SPG21-208ENST00000558943 EVX2Q03828 476 aa12.47□□□□□ -0.41
SPG21-208ENST00000558943 PROM2Q8N271 834 aa12.47□□□□□ -0.41
SPG21-208ENST00000558943 CREBZFQ9NS37 354 aa12.41□□□□□ -0.42
SPG21-208ENST00000558943 CLCN6P51797 869 aa12.4□□□□□ -0.42
SPG21-208ENST00000558943 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
SPG21-208ENST00000558943 GABBR2O75899 941 aa12.31□□□□□ -0.44
SPG21-208ENST00000558943 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
SPG21-208ENST00000558943 ZNF579Q8NAF0 562 aaKnown RBP12.25□□□□□ -0.45
SPG21-208ENST00000558943 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
SPG21-208ENST00000558943 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
SPG21-208ENST00000558943 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
SPG21-208ENST00000558943 PLEKHG5O94827 1062 aa12.19□□□□□ -0.46
SPG21-208ENST00000558943 FKBP8Q14318 412 aa12.14□□□□□ -0.47
SPG21-208ENST00000558943 MIER1Q8N108 512 aa12.07□□□□□ -0.48
SPG21-208ENST00000558943 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
SPG21-208ENST00000558943 DCBLD2Q96PD2 775 aa12.04□□□□□ -0.48
SPG21-208ENST00000558943 NISCHQ9Y2I1 1504 aa12.04□□□□□ -0.48
SPG21-208ENST00000558943 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
SPG21-208ENST00000558943 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
SPG21-208ENST00000558943 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
SPG21-208ENST00000558943 PHF12Q96QT6 1004 aa11.98□□□□□ -0.49
SPG21-208ENST00000558943 GALR2O43603 387 aaPredicted RBP11.97□□□□□ -0.49
SPG21-208ENST00000558943 CCDC61Q9Y6R9 512 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms