RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CCER1Q8TC90 406 aaPredicted RBP8.45□□□□□ -1.06
TDP1-215ENST00000556498 IGSF3O75054 1194 aa8.44□□□□□ -1.06
TDP1-215ENST00000556498 KDM4AO75164 1064 aa8.44□□□□□ -1.06
TDP1-215ENST00000556498 NEFMP07197 916 aa8.44□□□□□ -1.06
TDP1-215ENST00000556498 RIC3Q7Z5B4 369 aa8.44□□□□□ -1.06
TDP1-215ENST00000556498 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.44□□□□□ -1.06
TDP1-215ENST00000556498 SPTLC1O15269 473 aa8.43□□□□□ -1.06
TDP1-215ENST00000556498 SETQ01105 290 aaPredicted RBP8.43□□□□□ -1.06
TDP1-215ENST00000556498 FTSJ3Q8IY81 847 aaKnown RBP8.43□□□□□ -1.06
TDP1-215ENST00000556498 STAC3Q96MF2 364 aa8.43□□□□□ -1.06
TDP1-215ENST00000556498 PSMD1Q99460 953 aa8.43□□□□□ -1.06
TDP1-215ENST00000556498 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
TDP1-215ENST00000556498 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
TDP1-215ENST00000556498 LIMD1Q9UGP4 676 aa8.43□□□□□ -1.06
TDP1-215ENST00000556498 MOXD2PA6NHM9 499 aa8.42□□□□□ -1.06
TDP1-215ENST00000556498 PTMAP06454 111 aaKnown RBP8.42□□□□□ -1.06
TDP1-215ENST00000556498 GJA5P36382 358 aa8.42□□□□□ -1.06
TDP1-215ENST00000556498 USP46P62068 366 aa8.42□□□□□ -1.06
TDP1-215ENST00000556498 TUSC1Q2TAM9 212 aa8.42□□□□□ -1.06
TDP1-215ENST00000556498 RSBN1LQ6PCB5 846 aaPredicted RBP8.42□□□□□ -1.06
TDP1-215ENST00000556498 ATP1B4Q9UN42 357 aaPredicted RBP8.42□□□□□ -1.06
TDP1-215ENST00000556498 NDUFV2P19404 249 aa8.41□□□□□ -1.06
TDP1-215ENST00000556498 RTL5Q5HYW3 569 aaPredicted RBP8.41□□□□□ -1.06
TDP1-215ENST00000556498 LRCH3Q96II8 777 aa8.41□□□□□ -1.06
TDP1-215ENST00000556498 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.41□□□□□ -1.06
TDP1-215ENST00000556498 GOLGA8CPA6NN73 597 aa8.4□□□□□ -1.06
TDP1-215ENST00000556498 MCCP23508 829 aa8.4□□□□□ -1.06
TDP1-215ENST00000556498 HOXA2O43364 376 aa8.39□□□□□ -1.07
TDP1-215ENST00000556498 RNF40O75150 1001 aa8.39□□□□□ -1.07
TDP1-215ENST00000556498 CFHP08603 1231 aa8.39□□□□□ -1.07
TDP1-215ENST00000556498 CNGB1Q14028 1251 aaPredicted RBP8.39□□□□□ -1.07
TDP1-215ENST00000556498 ANKK1Q8NFD2 765 aa8.39□□□□□ -1.07
TDP1-215ENST00000556498 NECTIN2Q92692 538 aa8.39□□□□□ -1.07
TDP1-215ENST00000556498 FANCIQ9NVI1 1328 aa8.38□□□□□ -1.07
TDP1-215ENST00000556498 SOWAHBA6NEL2 793 aa8.38□□□□□ -1.07
TDP1-215ENST00000556498 RRP9O43818 475 aaKnown RBP8.38□□□□□ -1.07
TDP1-215ENST00000556498 FBXO31Q5XUX0 539 aaPredicted RBP8.38□□□□□ -1.07
TDP1-215ENST00000556498 PPP2R2DQ66LE6 453 aa8.38□□□□□ -1.07
TDP1-215ENST00000556498 PLCD4Q9BRC7 762 aa8.38□□□□□ -1.07
TDP1-215ENST00000556498 PCDHB15Q9Y5E8 787 aa8.38□□□□□ -1.07
TDP1-215ENST00000556498 FUT2Q10981 343 aa8.37□□□□□ -1.07
TDP1-215ENST00000556498 POTEGQ6S5H5 508 aa8.37□□□□□ -1.07
TDP1-215ENST00000556498 WNT2BQ93097 391 aa8.37□□□□□ -1.07
TDP1-215ENST00000556498 DCAF1Q9Y4B6 1507 aa8.37□□□□□ -1.07
TDP1-215ENST00000556498 LILRB3O75022 631 aa8.36□□□□□ -1.07
TDP1-215ENST00000556498 FDX1P10109 184 aa8.36□□□□□ -1.07
TDP1-215ENST00000556498 ATP6V1AP38606 617 aa8.36□□□□□ -1.07
TDP1-215ENST00000556498 FLIIQ13045 1269 aa8.36□□□□□ -1.07
TDP1-215ENST00000556498 QPCTQ16769 361 aa8.36□□□□□ -1.07
TDP1-215ENST00000556498 KMT5BQ4FZB7 885 aa8.36□□□□□ -1.07
TDP1-215ENST00000556498 GRIPAP1Q4V328 841 aa8.36□□□□□ -1.07
TDP1-215ENST00000556498 ZNF592Q92610 1267 aa8.36□□□□□ -1.07
TDP1-215ENST00000556498 POTEMA6NI47 508 aa8.35□□□□□ -1.07
TDP1-215ENST00000556498 ACTN4O43707 911 aaKnown RBP8.35□□□□□ -1.07
TDP1-215ENST00000556498 CANXP27824 592 aaKnown RBP8.35□□□□□ -1.07
TDP1-215ENST00000556498 RFC5P40937 340 aa8.35□□□□□ -1.07
TDP1-215ENST00000556498 BCAMP50895 628 aa8.35□□□□□ -1.07
TDP1-215ENST00000556498 PPP4CP60510 307 aa8.35□□□□□ -1.07
TDP1-215ENST00000556498 CSPP1Q1MSJ5 1256 aa8.35□□□□□ -1.07
TDP1-215ENST00000556498 PRPF38BQ5VTL8 546 aaKnown RBP8.35□□□□□ -1.07
TDP1-215ENST00000556498 CDAN1Q8IWY9 1227 aa8.35□□□□□ -1.07
TDP1-215ENST00000556498 HLA-CQ95604 372 aa8.35□□□□□ -1.07
TDP1-215ENST00000556498 PCDHGC3Q9UN70 934 aa8.35□□□□□ -1.07
TDP1-215ENST00000556498 ZBTB7CA1YPR0 619 aa8.34□□□□□ -1.07
TDP1-215ENST00000556498 C11orf95C9JLR9 678 aaPredicted RBP8.34□□□□□ -1.07
TDP1-215ENST00000556498 GUCA2AQ02747 115 aa8.34□□□□□ -1.07
TDP1-215ENST00000556498 CC2D2BQ6DHV5 1058 aa8.34□□□□□ -1.07
TDP1-215ENST00000556498 ANP32BQ92688 251 aaKnown RBP8.34□□□□□ -1.07
TDP1-215ENST00000556498 TSR3Q9UJK0 312 aaKnown RBP8.34□□□□□ -1.07
TDP1-215ENST00000556498 HPS5Q9UPZ3 1129 aa8.34□□□□□ -1.07
TDP1-215ENST00000556498 CLGNO14967 610 aa8.33□□□□□ -1.08
TDP1-215ENST00000556498 TMEM259Q4ZIN3 620 aa8.33□□□□□ -1.08
TDP1-215ENST00000556498 PRR14Q9BWN1 585 aa8.33□□□□□ -1.08
TDP1-215ENST00000556498 NUTM2BA6NNL0 878 aaPredicted RBP8.32□□□□□ -1.08
TDP1-215ENST00000556498 NUTM2EB1AL46 878 aaPredicted RBP8.32□□□□□ -1.08
TDP1-215ENST00000556498 NUTM2DQ5VT03 806 aaPredicted RBP8.32□□□□□ -1.08
TDP1-215ENST00000556498 NUTM2AQ8IVF1 878 aaPredicted RBP8.32□□□□□ -1.08
TDP1-215ENST00000556498 BANK1Q8NDB2 785 aa8.32□□□□□ -1.08
TDP1-215ENST00000556498 CABLES1Q8TDN4 633 aa8.32□□□□□ -1.08
TDP1-215ENST00000556498 ZBTB3Q9H5J0 574 aa8.32□□□□□ -1.08
TDP1-215ENST00000556498 APLP1P51693 650 aa8.31□□□□□ -1.08
TDP1-215ENST00000556498 MORN1Q5T089 497 aa8.31□□□□□ -1.08
TDP1-215ENST00000556498 SECISBP2LQ93073 1101 aaKnown RBP8.31□□□□□ -1.08
TDP1-215ENST00000556498 CCDC180Q9P1Z9 1646 aa8.3□□□□□ -1.08
TDP1-215ENST00000556498 IRX6P78412 446 aaPredicted RBP8.3□□□□□ -1.08
TDP1-215ENST00000556498 MCM6Q14566 821 aa8.3□□□□□ -1.08
TDP1-215ENST00000556498 THSD4Q6ZMP0 1018 aa8.3□□□□□ -1.08
TDP1-215ENST00000556498 WBP1LQ9NX94 342 aa8.3□□□□□ -1.08
TDP1-215ENST00000556498 CALD1Q05682 793 aaKnown RBP8.29□□□□□ -1.08
TDP1-215ENST00000556498 MTMR2Q13614 643 aa8.29□□□□□ -1.08
TDP1-215ENST00000556498 PUS10Q3MIT2 529 aaKnown RBP8.29□□□□□ -1.08
TDP1-215ENST00000556498 CNPY4Q8N129 248 aa8.29□□□□□ -1.08
TDP1-215ENST00000556498 SLC27A5Q9Y2P5 690 aa8.29□□□□□ -1.08
TDP1-215ENST00000556498 SPDYE5A6NIY4 337 aa8.28□□□□□ -1.08
TDP1-215ENST00000556498 AXDND1Q5T1B0 1012 aaPredicted RBP8.28□□□□□ -1.08
TDP1-215ENST00000556498 KCTD12Q96CX2 325 aaKnown RBP8.28□□□□□ -1.08
TDP1-215ENST00000556498 C6orf229H3BNL8 230 aa8.27□□□□□ -1.09
TDP1-215ENST00000556498 SNRKQ9NRH2 765 aa8.27□□□□□ -1.09
TDP1-215ENST00000556498 SUPT16HQ9Y5B9 1047 aaKnown RBP8.27□□□□□ -1.09
TDP1-215ENST00000556498 PPM1GO15355 546 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms