RNA–Protein interactions for RNA: ENST00000556371.1

ITGA7-216, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-216ENST00000556371 KTN1Q86UP2 1357 aaKnown RBP13.55□□□□□ -0.24
ITGA7-216ENST00000556371 PLEKHH1Q9ULM0 1364 aa13.55□□□□□ -0.24
ITGA7-216ENST00000556371 SRPK2P78362 688 aaKnown RBP13.54□□□□□ -0.24
ITGA7-216ENST00000556371 CC2D1BQ5T0F9 858 aaKnown RBP13.54□□□□□ -0.24
ITGA7-216ENST00000556371 CDK19Q9BWU1 502 aa13.54□□□□□ -0.24
ITGA7-216ENST00000556371 MRS2Q9HD23 443 aa13.54□□□□□ -0.24
ITGA7-216ENST00000556371 TULP4Q9NRJ4 1543 aa13.54□□□□□ -0.24
ITGA7-216ENST00000556371 SETD1BQ9UPS6 1966 aaKnown RBP13.52□□□□□ -0.24
ITGA7-216ENST00000556371 AMER1Q5JTC6 1135 aaPredicted RBP13.52□□□□□ -0.25
ITGA7-216ENST00000556371 AMOTL2Q9Y2J4 779 aa13.52□□□□□ -0.25
ITGA7-216ENST00000556371 TECPR2O15040 1411 aa13.52□□□□□ -0.25
ITGA7-216ENST00000556371 FAM135BQ49AJ0 1406 aa13.52□□□□□ -0.25
ITGA7-216ENST00000556371 MYOM1P52179 1685 aa13.52□□□□□ -0.25
ITGA7-216ENST00000556371 PTPRUQ92729 1446 aa13.51□□□□□ -0.25
ITGA7-216ENST00000556371 PARD3Q8TEW0 1356 aa13.51□□□□□ -0.25
ITGA7-216ENST00000556371 MYBBP1AQ9BQG0 1328 aaKnown RBP13.51□□□□□ -0.25
ITGA7-216ENST00000556371 ROBO2Q9HCK4 1378 aa13.5□□□□□ -0.25
ITGA7-216ENST00000556371 WASLO00401 505 aaPredicted RBP13.49□□□□□ -0.25
ITGA7-216ENST00000556371 ZNF142P52746 1687 aaPredicted RBP13.49□□□□□ -0.25
ITGA7-216ENST00000556371 NPC1L1Q9UHC9 1359 aa13.48□□□□□ -0.25
ITGA7-216ENST00000556371 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
ITGA7-216ENST00000556371 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
ITGA7-216ENST00000556371 KDM4FA0A1W2PPD8 638 aa13.47□□□□□ -0.25
ITGA7-216ENST00000556371 CPS1P31327 1500 aa13.47□□□□□ -0.25
ITGA7-216ENST00000556371 KNDC1Q76NI1 1749 aa13.47□□□□□ -0.25
ITGA7-216ENST00000556371 BRD4O60885 1362 aaPredicted RBP13.46□□□□□ -0.25
ITGA7-216ENST00000556371 NCKAP5LQ9HCH0 1330 aa13.46□□□□□ -0.25
ITGA7-216ENST00000556371 NLRP13Q86W25 1043 aa13.46□□□□□ -0.25
ITGA7-216ENST00000556371 PNISRQ8TF01 805 aaKnown RBP13.46□□□□□ -0.25
ITGA7-216ENST00000556371 CABP1Q9NZU7 370 aa13.46□□□□□ -0.25
ITGA7-216ENST00000556371 PIK3R4Q99570 1358 aa13.45□□□□□ -0.26
ITGA7-216ENST00000556371 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
ITGA7-216ENST00000556371 DIP2AQ14689 1571 aa13.45□□□□□ -0.26
ITGA7-216ENST00000556371 TERF2IPQ9NYB0 399 aa13.45□□□□□ -0.26
ITGA7-216ENST00000556371 NSD3Q9BZ95 1437 aa13.45□□□□□ -0.26
ITGA7-216ENST00000556371 ANKRD36BQ8N2N9 1353 aa13.45□□□□□ -0.26
ITGA7-216ENST00000556371 PPP2R1AP30153 589 aa13.44□□□□□ -0.26
ITGA7-216ENST00000556371 NUDT16Q96DE0 195 aaKnown RBP13.44□□□□□ -0.26
ITGA7-216ENST00000556371 NPHP4O75161 1426 aaPredicted RBP13.43□□□□□ -0.26
ITGA7-216ENST00000556371 KCNA6P17658 529 aa13.43□□□□□ -0.26
ITGA7-216ENST00000556371 HDGFL2Q7Z4V5 671 aaPredicted RBP13.42□□□□□ -0.26
ITGA7-216ENST00000556371 HNRNPUQ00839 825 aaKnown RBP eCLIP13.41□□□□□ -0.26
ITGA7-216ENST00000556371 MORC1Q86VD1 984 aa13.41□□□□□ -0.26
ITGA7-216ENST00000556371 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
ITGA7-216ENST00000556371 A0A1W2PP64 1363 aa13.41□□□□□ -0.26
ITGA7-216ENST00000556371 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.41□□□□□ -0.26
ITGA7-216ENST00000556371 CGNL1Q0VF96 1302 aa13.4□□□□□ -0.26
ITGA7-216ENST00000556371 PTCH1Q13635 1447 aa13.4□□□□□ -0.26
ITGA7-216ENST00000556371 CD163L1Q9NR16 1453 aa13.4□□□□□ -0.26
ITGA7-216ENST00000556371 PRR36Q9H6K5 1346 aa13.39□□□□□ -0.27
ITGA7-216ENST00000556371 XRN1Q8IZH2 1706 aaKnown RBP13.38□□□□□ -0.27
ITGA7-216ENST00000556371 PPIP5K1Q6PFW1 1433 aa13.38□□□□□ -0.27
ITGA7-216ENST00000556371 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
ITGA7-216ENST00000556371 FYB1O15117 783 aa13.37□□□□□ -0.27
ITGA7-216ENST00000556371 HSPA2P54652 639 aa13.37□□□□□ -0.27
ITGA7-216ENST00000556371 ADGRB2O60241 1585 aa13.37□□□□□ -0.27
ITGA7-216ENST00000556371 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
ITGA7-216ENST00000556371 CPSF1Q10570 1443 aaKnown RBP13.36□□□□□ -0.27
ITGA7-216ENST00000556371 ATP7BP35670 1465 aa13.36□□□□□ -0.27
ITGA7-216ENST00000556371 NSD2O96028 1365 aa13.35□□□□□ -0.27
ITGA7-216ENST00000556371 CHD2O14647 1828 aaKnown RBP13.35□□□□□ -0.27
ITGA7-216ENST00000556371 TNNT2P45379 298 aaPredicted RBP13.35□□□□□ -0.27
ITGA7-216ENST00000556371 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
ITGA7-216ENST00000556371 GGNBP2Q9H3C7 697 aa13.35□□□□□ -0.27
ITGA7-216ENST00000556371 USP32Q8NFA0 1604 aa13.35□□□□□ -0.27
ITGA7-216ENST00000556371 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.34□□□□□ -0.27
ITGA7-216ENST00000556371 RBM33Q96EV2 1170 aaKnown RBP13.34□□□□□ -0.27
ITGA7-216ENST00000556371 ACEP12821 1306 aa13.32□□□□□ -0.28
ITGA7-216ENST00000556371 PROSER2Q86WR7 435 aaPredicted RBP13.31□□□□□ -0.28
ITGA7-216ENST00000556371 ADAMTS8Q9UP79 889 aa13.31□□□□□ -0.28
ITGA7-216ENST00000556371 EDC4Q6P2E9 1401 aaKnown RBP13.3□□□□□ -0.28
ITGA7-216ENST00000556371 CDC42BPGQ6DT37 1551 aa13.3□□□□□ -0.28
ITGA7-216ENST00000556371 MTHFSP49914 203 aa13.3□□□□□ -0.28
ITGA7-216ENST00000556371 WDR43Q15061 677 aaKnown RBP eCLIP13.3□□□□□ -0.28
ITGA7-216ENST00000556371 PMFBP1Q8TBY8 1022 aa13.3□□□□□ -0.28
ITGA7-216ENST00000556371 ZBED9Q6R2W3 1325 aa13.3□□□□□ -0.28
ITGA7-216ENST00000556371 NME9Q86XW9 330 aa13.29□□□□□ -0.28
ITGA7-216ENST00000556371 POLR3AO14802 1390 aaPredicted RBP13.29□□□□□ -0.28
ITGA7-216ENST00000556371 INSRP06213 1382 aa13.29□□□□□ -0.28
ITGA7-216ENST00000556371 LMTK3Q96Q04 1460 aa13.29□□□□□ -0.28
ITGA7-216ENST00000556371 SENP3-EIF4A1A0A087X0R7 540 aa13.28□□□□□ -0.28
ITGA7-216ENST00000556371 C14orf37Q86TY3 774 aa13.28□□□□□ -0.28
ITGA7-216ENST00000556371 NGDNQ8NEJ9 315 aaKnown RBP13.28□□□□□ -0.28
ITGA7-216ENST00000556371 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
ITGA7-216ENST00000556371 ANKARQ7Z5J8 1434 aa13.28□□□□□ -0.28
ITGA7-216ENST00000556371 CFAP53Q96M91 514 aa13.27□□□□□ -0.29
ITGA7-216ENST00000556371 TTC21BQ7Z4L5 1316 aa13.27□□□□□ -0.29
ITGA7-216ENST00000556371 NKTRP30414 1462 aaKnown RBP13.26□□□□□ -0.29
ITGA7-216ENST00000556371 NWD1Q149M9 1564 aa13.26□□□□□ -0.29
ITGA7-216ENST00000556371 TOPAZ1Q8N9V7 1692 aa13.26□□□□□ -0.29
ITGA7-216ENST00000556371 ADGRL3Q9HAR2 1447 aa13.26□□□□□ -0.29
ITGA7-216ENST00000556371 COG3Q96JB2 828 aa13.25□□□□□ -0.29
ITGA7-216ENST00000556371 GTF3C3Q9Y5Q9 886 aa13.25□□□□□ -0.29
ITGA7-216ENST00000556371 AKAP12Q02952 1782 aa13.25□□□□□ -0.29
ITGA7-216ENST00000556371 USP6P35125 1406 aa13.24□□□□□ -0.29
ITGA7-216ENST00000556371 BLMP54132 1417 aaPredicted RBP13.24□□□□□ -0.29
ITGA7-216ENST00000556371 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
ITGA7-216ENST00000556371 FBLN1P23142 703 aa13.24□□□□□ -0.29
ITGA7-216ENST00000556371 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
ITGA7-216ENST00000556371 FMN2Q9NZ56 1722 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms