RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 EEA1Q15075 1411 aa10.96□□□□□ -0.65
KTN1-213ENST00000554306 ADH1BP00325 375 aa10.96□□□□□ -0.65
KTN1-213ENST00000554306 LMOD2Q6P5Q4 547 aa10.96□□□□□ -0.65
KTN1-213ENST00000554306 TDRD9Q8NDG6 1382 aaKnown RBP10.95□□□□□ -0.66
KTN1-213ENST00000554306 GCGRP47871 477 aa10.95□□□□□ -0.66
KTN1-213ENST00000554306 SCUBE3Q8IX30 993 aa10.95□□□□□ -0.66
KTN1-213ENST00000554306 FAM9AQ8IZU1 332 aaPredicted RBP10.95□□□□□ -0.66
KTN1-213ENST00000554306 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
KTN1-213ENST00000554306 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
KTN1-213ENST00000554306 GAPVD1Q14C86 1478 aa10.94□□□□□ -0.66
KTN1-213ENST00000554306 ATP6V1AP38606 617 aa10.94□□□□□ -0.66
KTN1-213ENST00000554306 LAPTM4AQ15012 233 aa10.94□□□□□ -0.66
KTN1-213ENST00000554306 PUS10Q3MIT2 529 aaKnown RBP10.94□□□□□ -0.66
KTN1-213ENST00000554306 EIF4G3O43432 1585 aaKnown RBP10.94□□□□□ -0.66
KTN1-213ENST00000554306 ZNF608Q9ULD9 1512 aaPredicted RBP10.94□□□□□ -0.66
KTN1-213ENST00000554306 FUT2Q10981 343 aa10.93□□□□□ -0.66
KTN1-213ENST00000554306 CCDC102AQ96A19 550 aa10.93□□□□□ -0.66
KTN1-213ENST00000554306 RUSC2Q8N2Y8 1516 aa10.93□□□□□ -0.66
KTN1-213ENST00000554306 AQRO60306 1485 aaKnown RBP eCLIP10.93□□□□□ -0.66
KTN1-213ENST00000554306 RNF223E7ERA6 249 aa10.92□□□□□ -0.66
KTN1-213ENST00000554306 GRIPAP1Q4V328 841 aa10.92□□□□□ -0.66
KTN1-213ENST00000554306 MORN1Q5T089 497 aa10.92□□□□□ -0.66
KTN1-213ENST00000554306 S1PR4O95977 384 aa10.91□□□□□ -0.66
KTN1-213ENST00000554306 ANKLE1Q8NAG6 615 aa10.91□□□□□ -0.66
KTN1-213ENST00000554306 SLC6A16Q9GZN6 736 aa10.91□□□□□ -0.66
KTN1-213ENST00000554306 GRIN2BQ13224 1484 aa10.9□□□□□ -0.66
KTN1-213ENST00000554306 SPSB2Q99619 263 aa10.9□□□□□ -0.66
KTN1-213ENST00000554306 ERICH3Q5RHP9 1530 aa10.89□□□□□ -0.67
KTN1-213ENST00000554306 CD46P15529 392 aa10.89□□□□□ -0.67
KTN1-213ENST00000554306 MDM2Q00987 491 aaPredicted RBP10.89□□□□□ -0.67
KTN1-213ENST00000554306 CUL7Q14999 1698 aa10.88□□□□□ -0.67
KTN1-213ENST00000554306 CLCN1P35523 988 aa10.87□□□□□ -0.67
KTN1-213ENST00000554306 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
KTN1-213ENST00000554306 GPCPD1Q9NPB8 672 aa10.87□□□□□ -0.67
KTN1-213ENST00000554306 SALL2Q9Y467 1007 aaPredicted RBP10.87□□□□□ -0.67
KTN1-213ENST00000554306 IGF1RP08069 1367 aa10.87□□□□□ -0.67
KTN1-213ENST00000554306 GFRA3O60609 400 aa10.86□□□□□ -0.67
KTN1-213ENST00000554306 FMNL1O95466 1100 aaPredicted RBP10.86□□□□□ -0.67
KTN1-213ENST00000554306 SLC19A1P41440 591 aa10.86□□□□□ -0.67
KTN1-213ENST00000554306 SLC27A5Q9Y2P5 690 aa10.86□□□□□ -0.67
KTN1-213ENST00000554306 PPEF1O14829 653 aaPredicted RBP10.85□□□□□ -0.67
KTN1-213ENST00000554306 Q6ZNB5 142 aa10.85□□□□□ -0.67
KTN1-213ENST00000554306 BARGINQ6ZT62 677 aa10.85□□□□□ -0.67
KTN1-213ENST00000554306 THAP11Q96EK4 314 aa10.85□□□□□ -0.67
KTN1-213ENST00000554306 KDM4AO75164 1064 aa10.84□□□□□ -0.67
KTN1-213ENST00000554306 ZMYND10O75800 440 aa10.84□□□□□ -0.67
KTN1-213ENST00000554306 CARMIL1Q5VZK9 1371 aa10.84□□□□□ -0.67
KTN1-213ENST00000554306 SNAPC4Q5SXM2 1469 aa10.84□□□□□ -0.67
KTN1-213ENST00000554306 MAGI1Q96QZ7 1491 aaPredicted RBP10.84□□□□□ -0.67
KTN1-213ENST00000554306 NRG2O14511 850 aaPredicted RBP10.83□□□□□ -0.68
KTN1-213ENST00000554306 ZC3H15Q8WU90 426 aaKnown RBP10.83□□□□□ -0.68
KTN1-213ENST00000554306 ADAMTS12P58397 1594 aa10.82□□□□□ -0.68
KTN1-213ENST00000554306 USP46P62068 366 aa10.82□□□□□ -0.68
KTN1-213ENST00000554306 Q3C1V9 767 aa10.82□□□□□ -0.68
KTN1-213ENST00000554306 KIF21BO75037 1637 aa10.82□□□□□ -0.68
KTN1-213ENST00000554306 FHAD1B1AJZ9 1412 aa10.82□□□□□ -0.68
KTN1-213ENST00000554306 BRICD5Q6PL45 260 aa10.81□□□□□ -0.68
KTN1-213ENST00000554306 FAM217BQ9NTX9 383 aaPredicted RBP10.81□□□□□ -0.68
KTN1-213ENST00000554306 RAPGEF2Q9Y4G8 1499 aa10.81□□□□□ -0.68
KTN1-213ENST00000554306 SPRYD7Q5W111 196 aa10.8□□□□□ -0.68
KTN1-213ENST00000554306 CHMP7Q8WUX9 453 aaPredicted RBP10.8□□□□□ -0.68
KTN1-213ENST00000554306 EMID1Q96A84 441 aaPredicted RBP10.8□□□□□ -0.68
KTN1-213ENST00000554306 PDZRN3Q9UPQ7 1066 aa10.8□□□□□ -0.68
KTN1-213ENST00000554306 PRXQ9BXM0 1461 aa10.8□□□□□ -0.68
KTN1-213ENST00000554306 CHD1O14646 1710 aa10.79□□□□□ -0.68
KTN1-213ENST00000554306 MSS51Q4VC12 460 aa10.79□□□□□ -0.68
KTN1-213ENST00000554306 ZNF598Q86UK7 904 aaKnown RBP10.79□□□□□ -0.68
KTN1-213ENST00000554306 SYNJ2O15056 1496 aa10.79□□□□□ -0.68
KTN1-213ENST00000554306 LIAT1Q6ZQX7 453 aa10.78□□□□□ -0.68
KTN1-213ENST00000554306 FAM160A2Q8N612 972 aaPredicted RBP10.78□□□□□ -0.68
KTN1-213ENST00000554306 GOLGA3Q08378 1498 aa10.78□□□□□ -0.68
KTN1-213ENST00000554306 UBTFP17480 764 aaKnown RBP10.77□□□□□ -0.69
KTN1-213ENST00000554306 RNF19BQ6ZMZ0 732 aa10.76□□□□□ -0.69
KTN1-213ENST00000554306 GRIN2AQ12879 1464 aa10.75□□□□□ -0.69
KTN1-213ENST00000554306 HOXA2O43364 376 aa10.75□□□□□ -0.69
KTN1-213ENST00000554306 TTLL12Q14166 644 aaPredicted RBP10.75□□□□□ -0.69
KTN1-213ENST00000554306 AMHR2Q16671 573 aa10.75□□□□□ -0.69
KTN1-213ENST00000554306 PLA2G2CQ5R387 149 aa10.75□□□□□ -0.69
KTN1-213ENST00000554306 NUTM1Q86Y26 1132 aa10.75□□□□□ -0.69
KTN1-213ENST00000554306 FCF1Q9Y324 198 aaKnown RBP10.75□□□□□ -0.69
KTN1-213ENST00000554306 CTTNBP2Q8WZ74 1663 aa10.74□□□□□ -0.69
KTN1-213ENST00000554306 LOC105371045A0A1W2PR82 267 aa10.74□□□□□ -0.69
KTN1-213ENST00000554306 ZNF697Q5TEC3 545 aa10.74□□□□□ -0.69
KTN1-213ENST00000554306 SSTR3P32745 418 aaPredicted RBP10.73□□□□□ -0.69
KTN1-213ENST00000554306 RPIAP49247 311 aa10.73□□□□□ -0.69
KTN1-213ENST00000554306 REPIN1Q9BWE0 567 aaKnown RBP10.73□□□□□ -0.69
KTN1-213ENST00000554306 PRDM9Q9NQV7 894 aa10.73□□□□□ -0.69
KTN1-213ENST00000554306 PRR20EP86478 221 aa10.72□□□□□ -0.69
KTN1-213ENST00000554306 PRR20CP86479 221 aa10.72□□□□□ -0.69
KTN1-213ENST00000554306 PRR20DP86480 221 aa10.72□□□□□ -0.69
KTN1-213ENST00000554306 PRR20BP86481 221 aa10.72□□□□□ -0.69
KTN1-213ENST00000554306 PRR20AP86496 221 aa10.72□□□□□ -0.69
KTN1-213ENST00000554306 TRAF7Q6Q0C0 670 aa10.72□□□□□ -0.69
KTN1-213ENST00000554306 USB1Q9BQ65 265 aaKnown RBP10.72□□□□□ -0.69
KTN1-213ENST00000554306 TRIM67Q6ZTA4 783 aa10.71□□□□□ -0.69
KTN1-213ENST00000554306 TNIKQ9UKE5 1360 aa10.69□□□□□ -0.7
KTN1-213ENST00000554306 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
KTN1-213ENST00000554306 MMP16P51512 607 aa10.69□□□□□ -0.7
KTN1-213ENST00000554306 HLA-CQ95604 372 aa10.69□□□□□ -0.7
KTN1-213ENST00000554306 ZBTB24O43167 697 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms