RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 PCGF6Q9BYE7 350 aa6.8□□□□□ -1.32
PFDN5-219ENST00000553171 SETD5Q9C0A6 1442 aa6.8□□□□□ -1.32
PFDN5-219ENST00000553171 SPON1Q9HCB6 807 aa6.8□□□□□ -1.32
PFDN5-219ENST00000553171 NUP153P49790 1475 aaKnown RBP6.79□□□□□ -1.32
PFDN5-219ENST00000553171 GGT6Q6P531 493 aa6.79□□□□□ -1.32
PFDN5-219ENST00000553171 POTEGQ6S5H5 508 aa6.79□□□□□ -1.32
PFDN5-219ENST00000553171 CFAP44Q96MT7 982 aa6.79□□□□□ -1.32
PFDN5-219ENST00000553171 PRDM15P57071 1507 aaPredicted RBP6.79□□□□□ -1.32
PFDN5-219ENST00000553171 TIAM1Q13009 1591 aa6.78□□□□□ -1.32
PFDN5-219ENST00000553171 KCNQ2O43526 872 aa6.78□□□□□ -1.32
PFDN5-219ENST00000553171 LTKP29376 864 aa6.78□□□□□ -1.32
PFDN5-219ENST00000553171 EN1Q05925 392 aaPredicted RBP6.78□□□□□ -1.32
PFDN5-219ENST00000553171 TEX2Q8IWB9 1127 aa6.78□□□□□ -1.32
PFDN5-219ENST00000553171 ZNF592Q92610 1267 aa6.78□□□□□ -1.32
PFDN5-219ENST00000553171 LRRC59Q96AG4 307 aaKnown RBP6.78□□□□□ -1.32
PFDN5-219ENST00000553171 OTUD5Q96G74 571 aa6.78□□□□□ -1.32
PFDN5-219ENST00000553171 GJD4Q96KN9 370 aaPredicted RBP6.78□□□□□ -1.32
PFDN5-219ENST00000553171 ZMYND15Q9H091 742 aa6.78□□□□□ -1.32
PFDN5-219ENST00000553171 WWC3Q9ULE0 1092 aa6.78□□□□□ -1.32
PFDN5-219ENST00000553171 FAM83GA6ND36 823 aa6.77□□□□□ -1.33
PFDN5-219ENST00000553171 ADAMTS2O95450 1211 aa6.77□□□□□ -1.33
PFDN5-219ENST00000553171 DEKP35659 375 aaKnown RBP6.77□□□□□ -1.33
PFDN5-219ENST00000553171 CLEC11AQ9Y240 323 aa6.77□□□□□ -1.33
PFDN5-219ENST00000553171 KIDINS220Q9ULH0 1771 aa6.77□□□□□ -1.33
PFDN5-219ENST00000553171 CHADLQ6NUI6 762 aa6.76□□□□□ -1.33
PFDN5-219ENST00000553171 ADGBQ8N7X0 1667 aa6.75□□□□□ -1.33
PFDN5-219ENST00000553171 PZPP20742 1482 aa6.75□□□□□ -1.33
PFDN5-219ENST00000553171 AATKQ6ZMQ8 1374 aa6.75□□□□□ -1.33
PFDN5-219ENST00000553171 PNPLA6Q8IY17 1366 aa6.75□□□□□ -1.33
PFDN5-219ENST00000553171 CHRM1P11229 460 aaPredicted RBP6.75□□□□□ -1.33
PFDN5-219ENST00000553171 PTMSP20962 102 aa6.75□□□□□ -1.33
PFDN5-219ENST00000553171 SETQ01105 290 aaPredicted RBP6.75□□□□□ -1.33
PFDN5-219ENST00000553171 CC2D2BQ6DHV5 1058 aa6.75□□□□□ -1.33
PFDN5-219ENST00000553171 BRINP3Q76B58 766 aa6.75□□□□□ -1.33
PFDN5-219ENST00000553171 TXNDC2Q86VQ3 553 aa6.75□□□□□ -1.33
PFDN5-219ENST00000553171 P3H3Q8IVL6 736 aa6.75□□□□□ -1.33
PFDN5-219ENST00000553171 JMYQ8N9B5 988 aa6.75□□□□□ -1.33
PFDN5-219ENST00000553171 YTHDC1Q96MU7 727 aaKnown RBP6.75□□□□□ -1.33
PFDN5-219ENST00000553171 SPHKAPQ2M3C7 1700 aa6.74□□□□□ -1.33
PFDN5-219ENST00000553171 ZBTB22O15209 634 aa6.74□□□□□ -1.33
PFDN5-219ENST00000553171 APLP1P51693 650 aa6.74□□□□□ -1.33
PFDN5-219ENST00000553171 IRX6P78412 446 aaPredicted RBP6.74□□□□□ -1.33
PFDN5-219ENST00000553171 IPO4Q8TEX9 1081 aaKnown RBP6.74□□□□□ -1.33
PFDN5-219ENST00000553171 PLCD4Q9BRC7 762 aa6.74□□□□□ -1.33
PFDN5-219ENST00000553171 BRPF3Q9ULD4 1205 aa6.74□□□□□ -1.33
PFDN5-219ENST00000553171 NAP1L2Q9ULW6 460 aaPredicted RBP6.74□□□□□ -1.33
PFDN5-219ENST00000553171 DISP2A7MBM2 1401 aa6.74□□□□□ -1.33
PFDN5-219ENST00000553171 NKTRP30414 1462 aaKnown RBP6.73□□□□□ -1.33
PFDN5-219ENST00000553171 SPDYE1Q8NFV5 336 aaPredicted RBP6.73□□□□□ -1.33
PFDN5-219ENST00000553171 ZFP91Q96JP5 570 aaPredicted RBP6.73□□□□□ -1.33
PFDN5-219ENST00000553171 KDM5AP29375 1690 aaKnown RBP6.73□□□□□ -1.33
PFDN5-219ENST00000553171 TNS2Q63HR2 1409 aa6.73□□□□□ -1.33
PFDN5-219ENST00000553171 NCOA3Q9Y6Q9 1424 aa6.73□□□□□ -1.33
PFDN5-219ENST00000553171 FAM161AQ3B820 660 aa6.72□□□□□ -1.33
PFDN5-219ENST00000553171 CADPS2Q86UW7 1296 aa6.72□□□□□ -1.33
PFDN5-219ENST00000553171 A2MP01023 1474 aa6.72□□□□□ -1.33
PFDN5-219ENST00000553171 CAMSAP2Q08AD1 1489 aa6.72□□□□□ -1.33
PFDN5-219ENST00000553171 SHANK3Q9BYB0 1731 aa6.71□□□□□ -1.34
PFDN5-219ENST00000553171 PTCH1Q13635 1447 aa6.71□□□□□ -1.34
PFDN5-219ENST00000553171 POTEB2H3BUK9 544 aa6.71□□□□□ -1.34
PFDN5-219ENST00000553171 ONECUT3O60422 494 aaPredicted RBP6.71□□□□□ -1.34
PFDN5-219ENST00000553171 EZH2Q15910 746 aaKnown RBP6.71□□□□□ -1.34
PFDN5-219ENST00000553171 SEPT12Q8IYM1 358 aa6.71□□□□□ -1.34
PFDN5-219ENST00000553171 CAMKK2Q96RR4 588 aa6.71□□□□□ -1.34
PFDN5-219ENST00000553171 NCOA2Q15596 1464 aa6.71□□□□□ -1.34
PFDN5-219ENST00000553171 BRWD3Q6RI45 1802 aa6.71□□□□□ -1.34
PFDN5-219ENST00000553171 PLXNC1O60486 1568 aa6.7□□□□□ -1.34
PFDN5-219ENST00000553171 MROH1Q8NDA8 1641 aa6.7□□□□□ -1.34
PFDN5-219ENST00000553171 SPDYE2BA6NHP3 402 aa6.7□□□□□ -1.34
PFDN5-219ENST00000553171 NEFMP07197 916 aa6.7□□□□□ -1.34
PFDN5-219ENST00000553171 SPDYE6P0CI01 402 aa6.7□□□□□ -1.34
PFDN5-219ENST00000553171 MCCP23508 829 aa6.7□□□□□ -1.34
PFDN5-219ENST00000553171 SPDYE2Q495Y8 402 aa6.7□□□□□ -1.34
PFDN5-219ENST00000553171 KRT27Q7Z3Y8 459 aa6.7□□□□□ -1.34
PFDN5-219ENST00000553171 CERS3Q8IU89 383 aa6.7□□□□□ -1.34
PFDN5-219ENST00000553171 SYT17Q9BSW7 474 aa6.7□□□□□ -1.34
PFDN5-219ENST00000553171 MYO5CQ9NQX4 1742 aa6.7□□□□□ -1.34
PFDN5-219ENST00000553171 MAST1Q9Y2H9 1570 aa6.69□□□□□ -1.34
PFDN5-219ENST00000553171 PTMAP06454 111 aaKnown RBP6.69□□□□□ -1.34
PFDN5-219ENST00000553171 GRIPAP1Q4V328 841 aa6.69□□□□□ -1.34
PFDN5-219ENST00000553171 C19orf44Q9H6X5 657 aa6.69□□□□□ -1.34
PFDN5-219ENST00000553171 EID1Q9Y6B2 187 aa6.69□□□□□ -1.34
PFDN5-219ENST00000553171 SLIT1O75093 1534 aa6.69□□□□□ -1.34
PFDN5-219ENST00000553171 ARHGAP5Q13017 1502 aa6.69□□□□□ -1.34
PFDN5-219ENST00000553171 CTTNBP2Q8WZ74 1663 aa6.68□□□□□ -1.34
PFDN5-219ENST00000553171 ARHGAP35Q9NRY4 1499 aa6.68□□□□□ -1.34
PFDN5-219ENST00000553171 CNPY4Q8N129 248 aa6.68□□□□□ -1.34
PFDN5-219ENST00000553171 GLI3P10071 1580 aa6.67□□□□□ -1.34
PFDN5-219ENST00000553171 CD44P16070 742 aaKnown RBP6.67□□□□□ -1.34
PFDN5-219ENST00000553171 ATF3P18847 181 aa6.67□□□□□ -1.34
PFDN5-219ENST00000553171 NBPF8Q3BBV2 869 aa6.67□□□□□ -1.34
PFDN5-219ENST00000553171 NBPF14Q5TI25 921 aa6.67□□□□□ -1.34
PFDN5-219ENST00000553171 NEUROD1Q13562 356 aa6.66□□□□□ -1.34
PFDN5-219ENST00000553171 FTSJ3Q8IY81 847 aaKnown RBP6.66□□□□□ -1.34
PFDN5-219ENST00000553171 NECTIN2Q92692 538 aa6.66□□□□□ -1.34
PFDN5-219ENST00000553171 KLRG1Q96E93 195 aa6.66□□□□□ -1.34
PFDN5-219ENST00000553171 DCBLD2Q96PD2 775 aa6.66□□□□□ -1.34
PFDN5-219ENST00000553171 SLC26A8Q96RN1 970 aa6.66□□□□□ -1.34
PFDN5-219ENST00000553171 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.66□□□□□ -1.34
PFDN5-219ENST00000553171 SPAG9O60271 1321 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms