RNA–Protein interactions for RNA: ENST00000552681.1

GNPTAB-210, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best)

Gene GNPTAB, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-210ENST00000552681 TANGO6Q9C0B7 1094 aa11.29□□□□□ -0.6
GNPTAB-210ENST00000552681 TBX22Q9Y458 520 aa11.28□□□□□ -0.6
GNPTAB-210ENST00000552681 EXOC5O00471 708 aa11.28□□□□□ -0.6
GNPTAB-210ENST00000552681 CAPN15O75808 1086 aa11.28□□□□□ -0.6
GNPTAB-210ENST00000552681 ABL2P42684 1182 aa11.28□□□□□ -0.6
GNPTAB-210ENST00000552681 GYS2P54840 703 aa11.28□□□□□ -0.6
GNPTAB-210ENST00000552681 SDR16C5Q8N3Y7 309 aa11.28□□□□□ -0.6
GNPTAB-210ENST00000552681 NCKAP5LQ9HCH0 1330 aa11.27□□□□□ -0.61
GNPTAB-210ENST00000552681 CCDC189A1A4V9 331 aa11.27□□□□□ -0.61
GNPTAB-210ENST00000552681 ZNF500O60304 480 aaPredicted RBP11.27□□□□□ -0.61
GNPTAB-210ENST00000552681 MAP2K5Q13163 448 aa11.27□□□□□ -0.61
GNPTAB-210ENST00000552681 SOX12O15370 315 aa11.26□□□□□ -0.61
GNPTAB-210ENST00000552681 IQSEC3Q9UPP2 1182 aaPredicted RBP11.26□□□□□ -0.61
GNPTAB-210ENST00000552681 COMMD10Q9Y6G5 202 aa11.26□□□□□ -0.61
GNPTAB-210ENST00000552681 HOXA2O43364 376 aa11.25□□□□□ -0.61
GNPTAB-210ENST00000552681 ANP32CO43423 234 aa11.25□□□□□ -0.61
GNPTAB-210ENST00000552681 POLD1P28340 1107 aa11.25□□□□□ -0.61
GNPTAB-210ENST00000552681 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
GNPTAB-210ENST00000552681 POLR3EQ9NVU0 708 aa11.25□□□□□ -0.61
GNPTAB-210ENST00000552681 LMOD3Q0VAK6 560 aa11.25□□□□□ -0.61
GNPTAB-210ENST00000552681 ZNF467Q7Z7K2 595 aaPredicted RBP11.25□□□□□ -0.61
GNPTAB-210ENST00000552681 NOP58Q9Y2X3 529 aaKnown RBP11.25□□□□□ -0.61
GNPTAB-210ENST00000552681 C7P10643 843 aa11.24□□□□□ -0.61
GNPTAB-210ENST00000552681 EVA1CP58658 441 aa11.24□□□□□ -0.61
GNPTAB-210ENST00000552681 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
GNPTAB-210ENST00000552681 LIG1P18858 919 aa11.24□□□□□ -0.61
GNPTAB-210ENST00000552681 NUBP1P53384 320 aa11.24□□□□□ -0.61
GNPTAB-210ENST00000552681 TBX4P57082 545 aa11.24□□□□□ -0.61
GNPTAB-210ENST00000552681 CACNB1Q02641 598 aaPredicted RBP11.24□□□□□ -0.61
GNPTAB-210ENST00000552681 PDE6BP35913 854 aa11.23□□□□□ -0.61
GNPTAB-210ENST00000552681 RPS6KC1Q96S38 1066 aa11.23□□□□□ -0.61
GNPTAB-210ENST00000552681 WWC3Q9ULE0 1092 aa11.23□□□□□ -0.61
GNPTAB-210ENST00000552681 ANKRD33BA6NCL7 494 aa11.23□□□□□ -0.61
GNPTAB-210ENST00000552681 BIRC2Q13490 618 aa11.23□□□□□ -0.61
GNPTAB-210ENST00000552681 GET4Q7L5D6 327 aaPredicted RBP11.23□□□□□ -0.61
GNPTAB-210ENST00000552681 ZNF622Q969S3 477 aaKnown RBP eCLIP11.23□□□□□ -0.61
GNPTAB-210ENST00000552681 LARP6Q9BRS8 491 aaKnown RBP11.23□□□□□ -0.61
GNPTAB-210ENST00000552681 NCAPD3P42695 1498 aa11.22□□□□□ -0.61
GNPTAB-210ENST00000552681 ERCC6Q03468 1493 aa11.22□□□□□ -0.61
GNPTAB-210ENST00000552681 CLGNO14967 610 aa11.22□□□□□ -0.61
GNPTAB-210ENST00000552681 IBSPP21815 317 aaPredicted RBP11.22□□□□□ -0.61
GNPTAB-210ENST00000552681 FECHP22830 423 aa11.22□□□□□ -0.61
GNPTAB-210ENST00000552681 VAMP1P23763 118 aa11.22□□□□□ -0.61
GNPTAB-210ENST00000552681 CCDC184Q52MB2 194 aa11.22□□□□□ -0.61
GNPTAB-210ENST00000552681 ARMCX6Q7L4S7 300 aa11.22□□□□□ -0.61
GNPTAB-210ENST00000552681 PPP4CP60510 307 aa11.21□□□□□ -0.61
GNPTAB-210ENST00000552681 CCDC96Q2M329 555 aa11.21□□□□□ -0.61
GNPTAB-210ENST00000552681 PLEKHG6Q3KR16 790 aa11.21□□□□□ -0.61
GNPTAB-210ENST00000552681 HDGFL1Q5TGJ6 251 aa11.21□□□□□ -0.61
GNPTAB-210ENST00000552681 ZNF280DQ6N043 979 aa11.21□□□□□ -0.61
GNPTAB-210ENST00000552681 OSCARQ8IYS5 282 aa11.21□□□□□ -0.61
GNPTAB-210ENST00000552681 CXorf38Q8TB03 319 aa11.21□□□□□ -0.61
GNPTAB-210ENST00000552681 CREBRFQ8IUR6 639 aa11.21□□□□□ -0.62
GNPTAB-210ENST00000552681 MFRPQ9BY79 579 aa11.21□□□□□ -0.62
GNPTAB-210ENST00000552681 IRF2BPLQ9H1B7 796 aa11.21□□□□□ -0.62
GNPTAB-210ENST00000552681 FBXO9Q9UK97 447 aaPredicted RBP11.21□□□□□ -0.62
GNPTAB-210ENST00000552681 ERBB3P21860 1342 aa11.21□□□□□ -0.62
GNPTAB-210ENST00000552681 STK10O94804 968 aaKnown RBP11.2□□□□□ -0.62
GNPTAB-210ENST00000552681 GTF2F1P35269 517 aaKnown RBP eCLIP11.2□□□□□ -0.62
GNPTAB-210ENST00000552681 AMOTL1Q8IY63 956 aa11.2□□□□□ -0.62
GNPTAB-210ENST00000552681 CACTIN-AS1Q8N1I8 211 aa11.2□□□□□ -0.62
GNPTAB-210ENST00000552681 MTMR14Q8NCE2 650 aa11.2□□□□□ -0.62
GNPTAB-210ENST00000552681 HELBQ8NG08 1087 aaPredicted RBP11.2□□□□□ -0.62
GNPTAB-210ENST00000552681 PIK3R5Q8WYR1 880 aa11.2□□□□□ -0.62
GNPTAB-210ENST00000552681 MARSP56192 900 aaKnown RBP11.19□□□□□ -0.62
GNPTAB-210ENST00000552681 RTL5Q5HYW3 569 aaPredicted RBP11.19□□□□□ -0.62
GNPTAB-210ENST00000552681 NRBP1Q9UHY1 535 aa11.19□□□□□ -0.62
GNPTAB-210ENST00000552681 DMGDHQ9UI17 866 aaKnown RBP11.19□□□□□ -0.62
GNPTAB-210ENST00000552681 RPUSD2Q8IZ73 545 aaKnown RBP11.19□□□□□ -0.62
GNPTAB-210ENST00000552681 STAG1Q8WVM7 1258 aa11.19□□□□□ -0.62
GNPTAB-210ENST00000552681 ARHGEF10LQ9HCE6 1279 aa11.19□□□□□ -0.62
GNPTAB-210ENST00000552681 HMGXB3Q12766 1538 aa11.18□□□□□ -0.62
GNPTAB-210ENST00000552681 PHLDB3Q6NSJ2 640 aa11.18□□□□□ -0.62
GNPTAB-210ENST00000552681 PMFBP1Q8TBY8 1022 aa11.18□□□□□ -0.62
GNPTAB-210ENST00000552681 CCDC85AQ96PX6 553 aaPredicted RBP11.18□□□□□ -0.62
GNPTAB-210ENST00000552681 TBC1D2BQ9UPU7 963 aa11.18□□□□□ -0.62
GNPTAB-210ENST00000552681 COL4A3BPQ9Y5P4 624 aa11.18□□□□□ -0.62
GNPTAB-210ENST00000552681 KAT6BQ8WYB5 2073 aa11.18□□□□□ -0.62
GNPTAB-210ENST00000552681 JAZF1Q86VZ6 243 aa11.18□□□□□ -0.62
GNPTAB-210ENST00000552681 FMNL3Q8IVF7 1028 aa11.18□□□□□ -0.62
GNPTAB-210ENST00000552681 CUEDC1Q9NWM3 386 aaPredicted RBP11.18□□□□□ -0.62
GNPTAB-210ENST00000552681 SMARCA2P51531 1590 aa11.17□□□□□ -0.62
GNPTAB-210ENST00000552681 DHX16O60231 1041 aaKnown RBP11.17□□□□□ -0.62
GNPTAB-210ENST00000552681 PNISRQ8TF01 805 aaKnown RBP11.17□□□□□ -0.62
GNPTAB-210ENST00000552681 PPP1R12CQ9BZL4 782 aa11.17□□□□□ -0.62
GNPTAB-210ENST00000552681 PRKAG2Q9UGJ0 569 aa11.17□□□□□ -0.62
GNPTAB-210ENST00000552681 CFAP69A5D8W1 941 aa11.16□□□□□ -0.62
GNPTAB-210ENST00000552681 LMOD1P29536 600 aaPredicted RBP11.16□□□□□ -0.62
GNPTAB-210ENST00000552681 HDLBPQ00341 1268 aaKnown RBP11.16□□□□□ -0.62
GNPTAB-210ENST00000552681 BMS1Q14692 1282 aaKnown RBP11.16□□□□□ -0.62
GNPTAB-210ENST00000552681 ZSWIM4Q9H7M6 989 aa11.16□□□□□ -0.62
GNPTAB-210ENST00000552681 ZKSCAN2Q63HK3 967 aa11.15□□□□□ -0.62
GNPTAB-210ENST00000552681 BACH2Q9BYV9 841 aa11.15□□□□□ -0.62
GNPTAB-210ENST00000552681 MAP3K20Q9NYL2 800 aaKnown RBP11.15□□□□□ -0.62
GNPTAB-210ENST00000552681 RPGRIP1LQ68CZ1 1315 aa11.15□□□□□ -0.62
GNPTAB-210ENST00000552681 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.15□□□□□ -0.62
GNPTAB-210ENST00000552681 SH3BP1Q9Y3L3 701 aa11.15□□□□□ -0.62
GNPTAB-210ENST00000552681 TTC36A6NLP5 189 aa11.14□□□□□ -0.63
GNPTAB-210ENST00000552681 GTF2E1P29083 439 aaPredicted RBP11.14□□□□□ -0.63
GNPTAB-210ENST00000552681 CCAR1Q8IX12 1150 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms