RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 APLP1P51693 650 aa9.36□□□□□ -0.91
SMARCC2-213ENST00000552627 RSPH4AQ5TD94 716 aa9.36□□□□□ -0.91
SMARCC2-213ENST00000552627 PRR14Q9BWN1 585 aa9.36□□□□□ -0.91
SMARCC2-213ENST00000552627 NUP160Q12769 1436 aa9.35□□□□□ -0.91
SMARCC2-213ENST00000552627 SLC10A3P09131 477 aa9.34□□□□□ -0.91
SMARCC2-213ENST00000552627 ERCC6L2Q5T890 1561 aa9.33□□□□□ -0.92
SMARCC2-213ENST00000552627 DDX11L8A8MPP1 907 aa9.33□□□□□ -0.92
SMARCC2-213ENST00000552627 ITGBL1O95965 494 aaPredicted RBP9.33□□□□□ -0.92
SMARCC2-213ENST00000552627 KMT5BQ4FZB7 885 aa9.33□□□□□ -0.92
SMARCC2-213ENST00000552627 SULF1Q8IWU6 871 aa9.33□□□□□ -0.92
SMARCC2-213ENST00000552627 CFHP08603 1231 aa9.32□□□□□ -0.92
SMARCC2-213ENST00000552627 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
SMARCC2-213ENST00000552627 RDH13Q8NBN7 331 aa9.32□□□□□ -0.92
SMARCC2-213ENST00000552627 CARMIL1Q5VZK9 1371 aa9.32□□□□□ -0.92
SMARCC2-213ENST00000552627 SHROOM2Q13796 1616 aa9.31□□□□□ -0.92
SMARCC2-213ENST00000552627 KCNC4Q03721 635 aa9.31□□□□□ -0.92
SMARCC2-213ENST00000552627 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
SMARCC2-213ENST00000552627 ARAP1Q96P48 1450 aa9.3□□□□□ -0.92
SMARCC2-213ENST00000552627 CLCN1P35523 988 aa9.3□□□□□ -0.92
SMARCC2-213ENST00000552627 FAM9AQ8IZU1 332 aaPredicted RBP9.3□□□□□ -0.92
SMARCC2-213ENST00000552627 AK7Q96M32 723 aa9.3□□□□□ -0.92
SMARCC2-213ENST00000552627 MTRQ99707 1265 aa9.3□□□□□ -0.92
SMARCC2-213ENST00000552627 ACTN4O43707 911 aaKnown RBP9.29□□□□□ -0.92
SMARCC2-213ENST00000552627 TJAP1Q5JTD0 557 aa9.29□□□□□ -0.92
SMARCC2-213ENST00000552627 IL21Q9HBE4 155 aa9.29□□□□□ -0.92
SMARCC2-213ENST00000552627 GPCPD1Q9NPB8 672 aa9.29□□□□□ -0.92
SMARCC2-213ENST00000552627 PCDHB3Q9Y5E6 796 aa9.29□□□□□ -0.92
SMARCC2-213ENST00000552627 RAPGEF2Q9Y4G8 1499 aa9.28□□□□□ -0.92
SMARCC2-213ENST00000552627 COPS2P61201 443 aa9.27□□□□□ -0.93
SMARCC2-213ENST00000552627 SLC24A3Q9HC58 644 aa9.27□□□□□ -0.93
SMARCC2-213ENST00000552627 CTTNBP2Q8WZ74 1663 aa9.26□□□□□ -0.93
SMARCC2-213ENST00000552627 GCGRP47871 477 aa9.26□□□□□ -0.93
SMARCC2-213ENST00000552627 CYB5RLQ6IPT4 315 aa9.26□□□□□ -0.93
SMARCC2-213ENST00000552627 PRXQ9BXM0 1461 aa9.26□□□□□ -0.93
SMARCC2-213ENST00000552627 KIAA0586Q9BVV6 1533 aa9.26□□□□□ -0.93
SMARCC2-213ENST00000552627 PRG4Q92954 1404 aaPredicted RBP9.25□□□□□ -0.93
SMARCC2-213ENST00000552627 TRIM66O15016 1216 aa9.25□□□□□ -0.93
SMARCC2-213ENST00000552627 TTLL12Q14166 644 aaPredicted RBP9.25□□□□□ -0.93
SMARCC2-213ENST00000552627 AMHR2Q16671 573 aa9.25□□□□□ -0.93
SMARCC2-213ENST00000552627 TMUB1Q9BVT8 246 aa9.25□□□□□ -0.93
SMARCC2-213ENST00000552627 IQGAP2Q13576 1575 aa9.24□□□□□ -0.93
SMARCC2-213ENST00000552627 CD46P15529 392 aa9.24□□□□□ -0.93
SMARCC2-213ENST00000552627 BLOC1S3Q6QNY0 202 aa9.24□□□□□ -0.93
SMARCC2-213ENST00000552627 ZNF516Q92618 1163 aa9.24□□□□□ -0.93
SMARCC2-213ENST00000552627 FAM217BQ9NTX9 383 aaPredicted RBP9.24□□□□□ -0.93
SMARCC2-213ENST00000552627 REPIN1Q9BWE0 567 aaKnown RBP9.23□□□□□ -0.93
SMARCC2-213ENST00000552627 EEA1Q15075 1411 aa9.22□□□□□ -0.93
SMARCC2-213ENST00000552627 ZPR1O75312 459 aa9.22□□□□□ -0.93
SMARCC2-213ENST00000552627 FUT2Q10981 343 aa9.22□□□□□ -0.93
SMARCC2-213ENST00000552627 A0A0G2JS52 829 aa9.21□□□□□ -0.94
SMARCC2-213ENST00000552627 NR1I2O75469 434 aa9.21□□□□□ -0.94
SMARCC2-213ENST00000552627 KIF21BO75037 1637 aa9.2□□□□□ -0.94
SMARCC2-213ENST00000552627 SSTR3P32745 418 aaPredicted RBP9.2□□□□□ -0.94
SMARCC2-213ENST00000552627 ATP6V1AP38606 617 aa9.2□□□□□ -0.94
SMARCC2-213ENST00000552627 PUS10Q3MIT2 529 aaKnown RBP9.2□□□□□ -0.94
SMARCC2-213ENST00000552627 PDE4DQ08499 809 aa9.19□□□□□ -0.94
SMARCC2-213ENST00000552627 GRIPAP1Q4V328 841 aa9.19□□□□□ -0.94
SMARCC2-213ENST00000552627 GIGYF2Q6Y7W6 1299 aaKnown RBP9.19□□□□□ -0.94
SMARCC2-213ENST00000552627 NKX2-3Q8TAU0 364 aa9.19□□□□□ -0.94
SMARCC2-213ENST00000552627 TTBK1Q5TCY1 1321 aaPredicted RBP9.19□□□□□ -0.94
SMARCC2-213ENST00000552627 KDM4AO75164 1064 aa9.18□□□□□ -0.94
SMARCC2-213ENST00000552627 MORN1Q5T089 497 aa9.18□□□□□ -0.94
SMARCC2-213ENST00000552627 SCUBE3Q8IX30 993 aa9.18□□□□□ -0.94
SMARCC2-213ENST00000552627 PARP9Q8IXQ6 854 aa9.18□□□□□ -0.94
SMARCC2-213ENST00000552627 DISP1Q96F81 1524 aa9.18□□□□□ -0.94
SMARCC2-213ENST00000552627 UGGT2Q9NYU1 1516 aa9.18□□□□□ -0.94
SMARCC2-213ENST00000552627 KIAA0556O60303 1618 aa9.17□□□□□ -0.94
SMARCC2-213ENST00000552627 RANGAP1P46060 587 aaPredicted RBP9.15□□□□□ -0.94
SMARCC2-213ENST00000552627 USP46P62068 366 aa9.15□□□□□ -0.94
SMARCC2-213ENST00000552627 NUTM1Q86Y26 1132 aa9.15□□□□□ -0.94
SMARCC2-213ENST00000552627 SLC27A5Q9Y2P5 690 aa9.15□□□□□ -0.94
SMARCC2-213ENST00000552627 ADCY10Q96PN6 1610 aa9.15□□□□□ -0.94
SMARCC2-213ENST00000552627 CARMIL2Q6F5E8 1435 aa9.14□□□□□ -0.95
SMARCC2-213ENST00000552627 TLL1O43897 1013 aa9.14□□□□□ -0.95
SMARCC2-213ENST00000552627 GOLGA3Q08378 1498 aa9.14□□□□□ -0.95
SMARCC2-213ENST00000552627 GGCXP38435 758 aa9.13□□□□□ -0.95
SMARCC2-213ENST00000552627 PPP1R18Q6NYC8 613 aa9.13□□□□□ -0.95
SMARCC2-213ENST00000552627 BEGAINQ9BUH8 593 aa9.13□□□□□ -0.95
SMARCC2-213ENST00000552627 TNIKQ9UKE5 1360 aa9.12□□□□□ -0.95
SMARCC2-213ENST00000552627 SAMD9Q5K651 1589 aa9.12□□□□□ -0.95
SMARCC2-213ENST00000552627 RGS20O76081 388 aa9.12□□□□□ -0.95
SMARCC2-213ENST00000552627 ADH1BP00325 375 aa9.12□□□□□ -0.95
SMARCC2-213ENST00000552627 SPSB2Q99619 263 aa9.12□□□□□ -0.95
SMARCC2-213ENST00000552627 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.12□□□□□ -0.95
SMARCC2-213ENST00000552627 PTPRGP23470 1445 aa9.12□□□□□ -0.95
SMARCC2-213ENST00000552627 HOXA2O43364 376 aa9.11□□□□□ -0.95
SMARCC2-213ENST00000552627 FMNL1O95466 1100 aaPredicted RBP9.11□□□□□ -0.95
SMARCC2-213ENST00000552627 MS4A1P11836 297 aa9.11□□□□□ -0.95
SMARCC2-213ENST00000552627 TPRNQ4KMQ1 711 aa9.11□□□□□ -0.95
SMARCC2-213ENST00000552627 UBTFP17480 764 aaKnown RBP9.1□□□□□ -0.95
SMARCC2-213ENST00000552627 Q3C1V9 767 aa9.1□□□□□ -0.95
SMARCC2-213ENST00000552627 SPIRE2Q8WWL2 714 aa9.1□□□□□ -0.95
SMARCC2-213ENST00000552627 THAP11Q96EK4 314 aa9.1□□□□□ -0.95
SMARCC2-213ENST00000552627 SALL2Q9Y467 1007 aaPredicted RBP9.1□□□□□ -0.95
SMARCC2-213ENST00000552627 BRICD5Q6PL45 260 aa9.09□□□□□ -0.95
SMARCC2-213ENST00000552627 HLA-CQ95604 372 aa9.09□□□□□ -0.95
SMARCC2-213ENST00000552627 S1PR4O95977 384 aa9.08□□□□□ -0.96
SMARCC2-213ENST00000552627 SLC6A16Q9GZN6 736 aa9.08□□□□□ -0.96
SMARCC2-213ENST00000552627 PLB1Q6P1J6 1458 aa9.08□□□□□ -0.96
SMARCC2-213ENST00000552627 FHOD3Q2V2M9 1422 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms