RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 NUDT18Q6ZVK8 323 aa9.52□□□□□ -0.89
PPFIA2-226ENST00000552020 ZNF428Q96B54 188 aa9.52□□□□□ -0.89
PPFIA2-226ENST00000552020 EYA1Q99502 592 aa9.52□□□□□ -0.89
PPFIA2-226ENST00000552020 USTQ9Y2C2 406 aa9.52□□□□□ -0.89
PPFIA2-226ENST00000552020 BRD1O95696 1058 aa9.51□□□□□ -0.89
PPFIA2-226ENST00000552020 LSM11P83369 360 aaKnown RBP eCLIP9.51□□□□□ -0.89
PPFIA2-226ENST00000552020 ADAMTS19Q8TE59 1207 aa9.51□□□□□ -0.89
PPFIA2-226ENST00000552020 TSC1Q92574 1164 aa9.51□□□□□ -0.89
PPFIA2-226ENST00000552020 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
PPFIA2-226ENST00000552020 NBPF26B4DH59 902 aa9.5□□□□□ -0.89
PPFIA2-226ENST00000552020 GJD4Q96KN9 370 aaPredicted RBP9.5□□□□□ -0.89
PPFIA2-226ENST00000552020 PNMA3Q9UL41 463 aa9.5□□□□□ -0.89
PPFIA2-226ENST00000552020 LHX6Q9UPM6 363 aa9.5□□□□□ -0.89
PPFIA2-226ENST00000552020 KDM4AO75164 1064 aa9.49□□□□□ -0.89
PPFIA2-226ENST00000552020 COL9A1P20849 921 aa9.49□□□□□ -0.89
PPFIA2-226ENST00000552020 VAC14Q08AM6 782 aa9.49□□□□□ -0.89
PPFIA2-226ENST00000552020 CFAP70Q5T0N1 1121 aa9.49□□□□□ -0.89
PPFIA2-226ENST00000552020 PRPF38BQ5VTL8 546 aaKnown RBP9.49□□□□□ -0.89
PPFIA2-226ENST00000552020 EIF4G1Q04637 1599 aaKnown RBP9.49□□□□□ -0.89
PPFIA2-226ENST00000552020 CARNS1A5YM72 827 aa9.48□□□□□ -0.89
PPFIA2-226ENST00000552020 PPP1R12CQ9BZL4 782 aa9.48□□□□□ -0.89
PPFIA2-226ENST00000552020 TSKSQ9UJT2 592 aa9.48□□□□□ -0.89
PPFIA2-226ENST00000552020 FDX1P10109 184 aa9.47□□□□□ -0.89
PPFIA2-226ENST00000552020 PBX2P40425 430 aa9.47□□□□□ -0.89
PPFIA2-226ENST00000552020 TMEM134Q9H6X4 195 aa9.47□□□□□ -0.89
PPFIA2-226ENST00000552020 HMX1Q9NP08 348 aaPredicted RBP9.47□□□□□ -0.89
PPFIA2-226ENST00000552020 CUX2O14529 1486 aa9.47□□□□□ -0.89
PPFIA2-226ENST00000552020 LMOD1P29536 600 aaPredicted RBP9.46□□□□□ -0.9
PPFIA2-226ENST00000552020 TATDN2Q93075 761 aa9.46□□□□□ -0.9
PPFIA2-226ENST00000552020 AXIN2Q9Y2T1 843 aa9.46□□□□□ -0.9
PPFIA2-226ENST00000552020 C3orf80F5H4A9 247 aa9.45□□□□□ -0.9
PPFIA2-226ENST00000552020 CTDSPL2Q05D32 466 aa9.45□□□□□ -0.9
PPFIA2-226ENST00000552020 HELBQ8NG08 1087 aaPredicted RBP9.45□□□□□ -0.9
PPFIA2-226ENST00000552020 IVNS1ABPQ9Y6Y0 642 aa9.45□□□□□ -0.9
PPFIA2-226ENST00000552020 PALM3A6NDB9 673 aaPredicted RBP9.44□□□□□ -0.9
PPFIA2-226ENST00000552020 HOXA2O43364 376 aa9.44□□□□□ -0.9
PPFIA2-226ENST00000552020 USP46P62068 366 aa9.44□□□□□ -0.9
PPFIA2-226ENST00000552020 GUCA2AQ02747 115 aa9.44□□□□□ -0.9
PPFIA2-226ENST00000552020 CDCA8Q53HL2 280 aa9.44□□□□□ -0.9
PPFIA2-226ENST00000552020 PPP4R3BQ5MIZ7 849 aa9.44□□□□□ -0.9
PPFIA2-226ENST00000552020 PACS2Q86VP3 889 aa9.44□□□□□ -0.9
PPFIA2-226ENST00000552020 PPP1R3GB7ZBB8 358 aa9.43□□□□□ -0.9
PPFIA2-226ENST00000552020 SMAPO00193 183 aa9.43□□□□□ -0.9
PPFIA2-226ENST00000552020 RSPH4AQ5TD94 716 aa9.43□□□□□ -0.9
PPFIA2-226ENST00000552020 E9PSI1 815 aa9.42□□□□□ -0.9
PPFIA2-226ENST00000552020 CCDC27Q2M243 656 aa9.42□□□□□ -0.9
PPFIA2-226ENST00000552020 LRRN4Q8WUT4 740 aa9.42□□□□□ -0.9
PPFIA2-226ENST00000552020 TRIM34Q9BYJ4 488 aa9.42□□□□□ -0.9
PPFIA2-226ENST00000552020 PSDA5PKW4 1024 aaPredicted RBP9.41□□□□□ -0.9
PPFIA2-226ENST00000552020 TRIM6-TRIM34B2RNG4 842 aa9.41□□□□□ -0.9
PPFIA2-226ENST00000552020 PTPREP23469 700 aa9.41□□□□□ -0.9
PPFIA2-226ENST00000552020 HLA-CQ95604 372 aa9.41□□□□□ -0.9
PPFIA2-226ENST00000552020 TFIP11Q9UBB9 837 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-226ENST00000552020 GPR37L1O60883 481 aa9.4□□□□□ -0.9
PPFIA2-226ENST00000552020 GCGRP47871 477 aa9.4□□□□□ -0.9
PPFIA2-226ENST00000552020 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
PPFIA2-226ENST00000552020 MTMR2Q13614 643 aa9.4□□□□□ -0.9
PPFIA2-226ENST00000552020 VRTNQ9H8Y1 702 aa9.4□□□□□ -0.9
PPFIA2-226ENST00000552020 BCL2L12Q9HB09 334 aa9.4□□□□□ -0.9
PPFIA2-226ENST00000552020 PCDHGC3Q9UN70 934 aa9.4□□□□□ -0.9
PPFIA2-226ENST00000552020 ARHGAP33O14559 1287 aa9.39□□□□□ -0.91
PPFIA2-226ENST00000552020 POTEEQ6S8J3 1075 aa9.39□□□□□ -0.91
PPFIA2-226ENST00000552020 ALG2Q9H553 416 aa9.39□□□□□ -0.91
PPFIA2-226ENST00000552020 SHROOM4Q9ULL8 1493 aa9.39□□□□□ -0.91
PPFIA2-226ENST00000552020 C6orf229H3BNL8 230 aa9.38□□□□□ -0.91
PPFIA2-226ENST00000552020 SEMA3FQ13275 785 aa9.38□□□□□ -0.91
PPFIA2-226ENST00000552020 SND1Q7KZF4 910 aaKnown RBP eCLIP9.37□□□□□ -0.91
PPFIA2-226ENST00000552020 EPS8L1Q8TE68 723 aa9.37□□□□□ -0.91
PPFIA2-226ENST00000552020 UCN2Q96RP3 112 aa9.37□□□□□ -0.91
PPFIA2-226ENST00000552020 SOX11P35716 441 aa9.36□□□□□ -0.91
PPFIA2-226ENST00000552020 PRR7Q8TB68 274 aa9.36□□□□□ -0.91
PPFIA2-226ENST00000552020 CFAP99D6REC4 459 aa9.35□□□□□ -0.91
PPFIA2-226ENST00000552020 ATG7O95352 703 aa9.35□□□□□ -0.91
PPFIA2-226ENST00000552020 PROX2Q3B8N5 592 aa9.35□□□□□ -0.91
PPFIA2-226ENST00000552020 ADGRD1Q6QNK2 874 aa9.35□□□□□ -0.91
PPFIA2-226ENST00000552020 STAC3Q96MF2 364 aa9.35□□□□□ -0.91
PPFIA2-226ENST00000552020 MAFBQ9Y5Q3 323 aaPredicted RBP9.35□□□□□ -0.91
PPFIA2-226ENST00000552020 ERCC6Q03468 1493 aa9.34□□□□□ -0.91
PPFIA2-226ENST00000552020 PNMA1Q8ND90 353 aa9.34□□□□□ -0.91
PPFIA2-226ENST00000552020 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
PPFIA2-226ENST00000552020 SWT1Q5T5J6 900 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-226ENST00000552020 KCNH8Q96L42 1107 aa9.33□□□□□ -0.92
PPFIA2-226ENST00000552020 TMEM88BA6NKF7 163 aa9.32□□□□□ -0.92
PPFIA2-226ENST00000552020 SLC10A3P09131 477 aa9.32□□□□□ -0.92
PPFIA2-226ENST00000552020 NR6A1Q15406 480 aa9.32□□□□□ -0.92
PPFIA2-226ENST00000552020 B4GALNT3Q6L9W6 998 aa9.32□□□□□ -0.92
PPFIA2-226ENST00000552020 TBC1D9Q6ZT07 1266 aa9.32□□□□□ -0.92
PPFIA2-226ENST00000552020 IGSF3O75054 1194 aa9.31□□□□□ -0.92
PPFIA2-226ENST00000552020 PSEN2P49810 448 aa9.31□□□□□ -0.92
PPFIA2-226ENST00000552020 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
PPFIA2-226ENST00000552020 SLF2Q8IX21 1173 aa9.31□□□□□ -0.92
PPFIA2-226ENST00000552020 KCNK17Q96T54 332 aa9.31□□□□□ -0.92
PPFIA2-226ENST00000552020 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
PPFIA2-226ENST00000552020 EIF4G2P78344 907 aaKnown RBP eCLIP9.3□□□□□ -0.92
PPFIA2-226ENST00000552020 PLA2G2EQ9NZK7 142 aa9.3□□□□□ -0.92
PPFIA2-226ENST00000552020 AMOTL2Q9Y2J4 779 aa9.3□□□□□ -0.92
PPFIA2-226ENST00000552020 TK2O00142 265 aa9.29□□□□□ -0.92
PPFIA2-226ENST00000552020 ATP9BO43861 1147 aa9.29□□□□□ -0.92
PPFIA2-226ENST00000552020 SLC4A3P48751 1232 aa9.29□□□□□ -0.92
PPFIA2-226ENST00000552020 DMRTA1Q5VZB9 504 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms