RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 FMNL3Q8IVF7 1028 aa10.51□□□□□ -0.73
PPFIA2-220ENST00000550584 TRIM6-TRIM34B2RNG4 842 aa10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 K7ELQ4 463 aaPredicted RBP10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 CDC45O75419 566 aa10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 TRIM34Q9BYJ4 488 aa10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 GOLGA6L9A6NEM1 432 aa10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 MNAT1P51948 309 aa10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 ROCK1Q13464 1354 aa10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 CLUAP1Q96AJ1 413 aa10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 ZKSCAN5Q9Y2L8 839 aa10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 PLEKHH2Q8IVE3 1493 aa10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 CBFA2T2O43439 604 aa10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 OS9Q13438 667 aaPredicted RBP10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 RRP7BPQ9NSQ0 103 aa10.5□□□□□ -0.73
PPFIA2-220ENST00000550584 SF3A1Q15459 793 aaKnown RBP10.49□□□□□ -0.73
PPFIA2-220ENST00000550584 NUTM1Q86Y26 1132 aa10.49□□□□□ -0.73
PPFIA2-220ENST00000550584 A0A1B0GUA9 196 aa10.49□□□□□ -0.73
PPFIA2-220ENST00000550584 GTF2F1P35269 517 aaKnown RBP eCLIP10.49□□□□□ -0.73
PPFIA2-220ENST00000550584 ZNF397Q8NF99 534 aaPredicted RBP10.49□□□□□ -0.73
PPFIA2-220ENST00000550584 TMX4Q9H1E5 349 aaPredicted RBP10.49□□□□□ -0.73
PPFIA2-220ENST00000550584 CCDC171Q6TFL3 1326 aa10.49□□□□□ -0.73
PPFIA2-220ENST00000550584 PDE3AQ14432 1141 aa10.49□□□□□ -0.73
PPFIA2-220ENST00000550584 DHX29Q7Z478 1369 aaKnown RBP10.49□□□□□ -0.73
PPFIA2-220ENST00000550584 MAPK8IP2Q13387 824 aaPredicted RBP10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 CCDC73Q6ZRK6 1079 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 P3H3Q8IVL6 736 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 MIPOL1Q8TD10 442 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 PLEKHH1Q9ULM0 1364 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 H3BQV1 296 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 IFFO2Q5TF58 517 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 XRCC6P12956 609 aaKnown RBP eCLIP10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 PTPN14Q15678 1187 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 PLCD3Q8N3E9 789 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 SMARCE1Q969G3 411 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 SMC4Q9NTJ3 1288 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 SWAP70Q9UH65 585 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 CCDC50Q8IVM0 306 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 WDR66Q8TBY9 1149 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 LRRCC1Q9C099 1032 aa10.48□□□□□ -0.73
PPFIA2-220ENST00000550584 SH3BGRP55822 239 aaPredicted RBP10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 TEX2Q8IWB9 1127 aa10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 FBXO3Q9UK99 471 aa10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 XPCQ01831 940 aaPredicted RBP10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 SRRTQ9BXP5 876 aaKnown RBP10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 ZNF777Q9ULD5 760 aaPredicted RBP10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 KIF27Q86VH2 1401 aa10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 WDR33Q9C0J8 1336 aaKnown RBP10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 PRPF40AO75400 957 aaKnown RBP10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 PPM1EQ8WY54 764 aa10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 PSMD1Q99460 953 aa10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 EZRP15311 586 aaKnown RBP10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 CCDC7Q96M83 1385 aa10.47□□□□□ -0.73
PPFIA2-220ENST00000550584 KLHL40Q2TBA0 621 aa10.46□□□□□ -0.73
PPFIA2-220ENST00000550584 RUFY2Q8WXA3 655 aa10.46□□□□□ -0.73
PPFIA2-220ENST00000550584 CAVIN2O95810 425 aa10.46□□□□□ -0.73
PPFIA2-220ENST00000550584 SMC3Q9UQE7 1217 aa10.46□□□□□ -0.73
PPFIA2-220ENST00000550584 ZSCAN12O43309 604 aa10.46□□□□□ -0.74
PPFIA2-220ENST00000550584 LRCH2Q5VUJ6 765 aa10.46□□□□□ -0.74
PPFIA2-220ENST00000550584 ERC1Q8IUD2 1116 aa10.46□□□□□ -0.74
PPFIA2-220ENST00000550584 CCDC146Q8IYE0 955 aa10.46□□□□□ -0.74
PPFIA2-220ENST00000550584 TULP1O00294 542 aaPredicted RBP10.45□□□□□ -0.74
PPFIA2-220ENST00000550584 GBP6Q6ZN66 633 aa10.45□□□□□ -0.74
PPFIA2-220ENST00000550584 RNF214Q8ND24 703 aa10.45□□□□□ -0.74
PPFIA2-220ENST00000550584 BICD2Q8TD16 824 aa10.45□□□□□ -0.74
PPFIA2-220ENST00000550584 PDCP20941 246 aa10.45□□□□□ -0.74
PPFIA2-220ENST00000550584 A6NNZ2 444 aa10.45□□□□□ -0.74
PPFIA2-220ENST00000550584 GOLIM4O00461 696 aa10.45□□□□□ -0.74
PPFIA2-220ENST00000550584 TUBBP07437 444 aa10.45□□□□□ -0.74
PPFIA2-220ENST00000550584 TUBB8Q3ZCM7 444 aa10.45□□□□□ -0.74
PPFIA2-220ENST00000550584 OLFM4Q6UX06 510 aa10.45□□□□□ -0.74
PPFIA2-220ENST00000550584 SMC2O95347 1197 aa10.44□□□□□ -0.74
PPFIA2-220ENST00000550584 NEUROD2Q15784 382 aa10.44□□□□□ -0.74
PPFIA2-220ENST00000550584 PIP4K2AP48426 406 aaPredicted RBP10.44□□□□□ -0.74
PPFIA2-220ENST00000550584 KIF1CO43896 1103 aaKnown RBP10.44□□□□□ -0.74
PPFIA2-220ENST00000550584 GSDMDP57764 484 aa10.44□□□□□ -0.74
PPFIA2-220ENST00000550584 MYRIPQ8NFW9 859 aa10.44□□□□□ -0.74
PPFIA2-220ENST00000550584 ERLIN2O94905 339 aa10.44□□□□□ -0.74
PPFIA2-220ENST00000550584 ATP6V1AP38606 617 aa10.44□□□□□ -0.74
PPFIA2-220ENST00000550584 POTEDQ86YR6 584 aa10.44□□□□□ -0.74
PPFIA2-220ENST00000550584 NOL7Q9UMY1 257 aaKnown RBP10.44□□□□□ -0.74
PPFIA2-220ENST00000550584 CEP120Q8N960 986 aa10.43□□□□□ -0.74
PPFIA2-220ENST00000550584 RBM33Q96EV2 1170 aaKnown RBP10.43□□□□□ -0.74
PPFIA2-220ENST00000550584 CEP89Q96ST8 783 aa10.43□□□□□ -0.74
PPFIA2-220ENST00000550584 RRAGDQ9NQL2 400 aaPredicted RBP10.43□□□□□ -0.74
PPFIA2-220ENST00000550584 CCDC183Q5T5S1 534 aa10.43□□□□□ -0.74
PPFIA2-220ENST00000550584 MORC1Q86VD1 984 aa10.43□□□□□ -0.74
PPFIA2-220ENST00000550584 CCDC102AQ96A19 550 aa10.43□□□□□ -0.74
PPFIA2-220ENST00000550584 RSRC1Q96IZ7 334 aaKnown RBP10.43□□□□□ -0.74
PPFIA2-220ENST00000550584 SMTNL1A8MU46 457 aa10.43□□□□□ -0.74
PPFIA2-220ENST00000550584 TNNT1P13805 278 aa10.43□□□□□ -0.74
PPFIA2-220ENST00000550584 AKAP17AQ02040 695 aaKnown RBP10.43□□□□□ -0.74
PPFIA2-220ENST00000550584 VGFO15240 615 aaPredicted RBP10.42□□□□□ -0.74
PPFIA2-220ENST00000550584 NOLC1Q14978 699 aaKnown RBP eCLIP10.42□□□□□ -0.74
PPFIA2-220ENST00000550584 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.42□□□□□ -0.74
PPFIA2-220ENST00000550584 CHMP3Q9Y3E7 222 aa10.42□□□□□ -0.74
PPFIA2-220ENST00000550584 CRACR2AQ9BSW2 395 aa10.42□□□□□ -0.74
PPFIA2-220ENST00000550584 MIA2Q96PC5 1412 aa10.41□□□□□ -0.74
PPFIA2-220ENST00000550584 MAP2K2P36507 400 aa10.41□□□□□ -0.74
PPFIA2-220ENST00000550584 SPDYE4A6NLX3 237 aa10.41□□□□□ -0.74
PPFIA2-220ENST00000550584 ANKRD45Q5TZF3 282 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms