RNA–Protein interactions for RNA: ENST00000549872.5

CHPT1-205, Transcript of choline phosphotransferase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHPT1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-205ENST00000549872 PUS7Q96PZ0 661 aaKnown RBP36.25■■■■□ 3.39
CHPT1-205ENST00000549872 SLC12A5Q9H2X9 1139 aa36.24■■■■□ 3.39
CHPT1-205ENST00000549872 KNDC1Q76NI1 1749 aa36.23■■■■□ 3.39
CHPT1-205ENST00000549872 ZNF142P52746 1687 aaPredicted RBP36.22■■■■□ 3.39
CHPT1-205ENST00000549872 AMER1Q5JTC6 1135 aaPredicted RBP36.22■■■■□ 3.39
CHPT1-205ENST00000549872 SLC26A8Q96RN1 970 aa36.22■■■■□ 3.39
CHPT1-205ENST00000549872 MED14O60244 1454 aa36.21■■■■□ 3.39
CHPT1-205ENST00000549872 CARD14Q9BXL6 1004 aa36.21■■■■□ 3.39
CHPT1-205ENST00000549872 FAM9BQ8IZU0 186 aa36.2■■■■□ 3.39
CHPT1-205ENST00000549872 SRPK2P78362 688 aaKnown RBP36.2■■■■□ 3.39
CHPT1-205ENST00000549872 SETD1BQ9UPS6 1966 aaKnown RBP36.2■■■■□ 3.38
CHPT1-205ENST00000549872 TECPR2O15040 1411 aa36.18■■■■□ 3.38
CHPT1-205ENST00000549872 CPS1P31327 1500 aa36.16■■■■□ 3.38
CHPT1-205ENST00000549872 BRD4O60885 1362 aaPredicted RBP36.14■■■■□ 3.38
CHPT1-205ENST00000549872 FAM135BQ49AJ0 1406 aa36.13■■■■□ 3.37
CHPT1-205ENST00000549872 SIRT1Q96EB6 747 aa36.13■■■■□ 3.37
CHPT1-205ENST00000549872 CDK19Q9BWU1 502 aa36.13■■■■□ 3.37
CHPT1-205ENST00000549872 NLRP13Q86W25 1043 aa36.12■■■■□ 3.37
CHPT1-205ENST00000549872 NPC1L1Q9UHC9 1359 aa36.11■■■■□ 3.37
CHPT1-205ENST00000549872 TBX22Q9Y458 520 aa36.11■■■■□ 3.37
CHPT1-205ENST00000549872 PTPRUQ92729 1446 aa36.1■■■■□ 3.37
CHPT1-205ENST00000549872 ROBO2Q9HCK4 1378 aa36.09■■■■□ 3.37
CHPT1-205ENST00000549872 NSD3Q9BZ95 1437 aa36.08■■■■□ 3.37
CHPT1-205ENST00000549872 ATAD2Q6PL18 1390 aa36.08■■■■□ 3.37
CHPT1-205ENST00000549872 HNRNPUQ00839 825 aaKnown RBP eCLIP36.08■■■■□ 3.37
CHPT1-205ENST00000549872 DIP2AQ14689 1571 aa36.07■■■■□ 3.36
CHPT1-205ENST00000549872 PNISRQ8TF01 805 aaKnown RBP36.06■■■■□ 3.36
CHPT1-205ENST00000549872 ANKRD36BQ8N2N9 1353 aa36.05■■■■□ 3.36
CHPT1-205ENST00000549872 NINLQ9Y2I6 1382 aa36.04■■■■□ 3.36
CHPT1-205ENST00000549872 ANKLE2Q86XL3 938 aa36.04■■■■□ 3.36
CHPT1-205ENST00000549872 AMOTL2Q9Y2J4 779 aa36.01■■■■□ 3.36
CHPT1-205ENST00000549872 WASLO00401 505 aaPredicted RBP36■■■■□ 3.35
CHPT1-205ENST00000549872 PPP2R1AP30153 589 aa35.99■■■■□ 3.35
CHPT1-205ENST00000549872 A0A1W2PP64 1363 aa35.98■■■■□ 3.35
CHPT1-205ENST00000549872 USP32Q8NFA0 1604 aa35.97■■■■□ 3.35
CHPT1-205ENST00000549872 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.97■■■■□ 3.35
CHPT1-205ENST00000549872 CD163L1Q9NR16 1453 aa35.95■■■■□ 3.35
CHPT1-205ENST00000549872 CABP1Q9NZU7 370 aa35.95■■■■□ 3.34
CHPT1-205ENST00000549872 TERF2IPQ9NYB0 399 aa35.92■■■■□ 3.34
CHPT1-205ENST00000549872 XRN1Q8IZH2 1706 aaKnown RBP35.92■■■■□ 3.34
CHPT1-205ENST00000549872 CGNL1Q0VF96 1302 aa35.91■■■■□ 3.34
CHPT1-205ENST00000549872 PTCH1Q13635 1447 aa35.9■■■■□ 3.34
CHPT1-205ENST00000549872 ADGRB2O60241 1585 aa35.89■■■■□ 3.34
CHPT1-205ENST00000549872 SCAF1Q9H7N4 1312 aaKnown RBP35.89■■■■□ 3.34
CHPT1-205ENST00000549872 PIK3R4Q99570 1358 aa35.87■■■■□ 3.33
CHPT1-205ENST00000549872 HDGFL2Q7Z4V5 671 aaPredicted RBP35.85■■■■□ 3.33
CHPT1-205ENST00000549872 NUDT16Q96DE0 195 aaKnown RBP35.85■■■■□ 3.33
CHPT1-205ENST00000549872 MORC1Q86VD1 984 aa35.84■■■■□ 3.33
CHPT1-205ENST00000549872 KCNA6P17658 529 aa35.84■■■■□ 3.33
CHPT1-205ENST00000549872 PPIP5K1Q6PFW1 1433 aa35.83■■■■□ 3.33
CHPT1-205ENST00000549872 GTF3C3Q9Y5Q9 886 aa35.83■■■■□ 3.33
CHPT1-205ENST00000549872 ATP7BP35670 1465 aa35.82■■■■□ 3.33
CHPT1-205ENST00000549872 NCKAP5LQ9HCH0 1330 aa35.82■■■■□ 3.32
CHPT1-205ENST00000549872 NPHP4O75161 1426 aaPredicted RBP35.82■■■■□ 3.32
CHPT1-205ENST00000549872 CHD2O14647 1828 aaKnown RBP35.81■■■■□ 3.32
CHPT1-205ENST00000549872 PRR36Q9H6K5 1346 aa35.8■■■■□ 3.32
CHPT1-205ENST00000549872 NSD2O96028 1365 aa35.8■■■■□ 3.32
CHPT1-205ENST00000549872 CCDC61Q9Y6R9 512 aa35.79■■■■□ 3.32
CHPT1-205ENST00000549872 TNNT2P45379 298 aaPredicted RBP35.78■■■■□ 3.32
CHPT1-205ENST00000549872 ZBED9Q6R2W3 1325 aa35.78■■■■□ 3.32
CHPT1-205ENST00000549872 SENP3-EIF4A1A0A087X0R7 540 aa35.74■■■■□ 3.31
CHPT1-205ENST00000549872 KDM4FA0A1W2PPD8 638 aa35.74■■■■□ 3.31
CHPT1-205ENST00000549872 NUTM2FA1L443 756 aa35.74■■■■□ 3.31
CHPT1-205ENST00000549872 CPSF1Q10570 1443 aaKnown RBP35.73■■■■□ 3.31
CHPT1-205ENST00000549872 CDC42BPGQ6DT37 1551 aa35.73■■■■□ 3.31
CHPT1-205ENST00000549872 GGNBP2Q9H3C7 697 aa35.73■■■■□ 3.31
CHPT1-205ENST00000549872 FYB1O15117 783 aa35.72■■■■□ 3.31
CHPT1-205ENST00000549872 KIF20BQ96Q89 1820 aa35.7■■■■□ 3.31
CHPT1-205ENST00000549872 ANKRD26Q9UPS8 1709 aa35.7■■■■□ 3.31
CHPT1-205ENST00000549872 TOPAZ1Q8N9V7 1692 aa35.7■■■■□ 3.31
CHPT1-205ENST00000549872 ITSN1Q15811 1721 aa35.68■■■■□ 3.3
CHPT1-205ENST00000549872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.67■■■■□ 3.3
CHPT1-205ENST00000549872 AKAP12Q02952 1782 aa35.67■■■■□ 3.3
CHPT1-205ENST00000549872 ADAMTS8Q9UP79 889 aa35.66■■■■□ 3.3
CHPT1-205ENST00000549872 MON2Q7Z3U7 1717 aa35.66■■■■□ 3.3
CHPT1-205ENST00000549872 WDR43Q15061 677 aaKnown RBP eCLIP35.65■■■■□ 3.3
CHPT1-205ENST00000549872 EDC4Q6P2E9 1401 aaKnown RBP35.64■■■■□ 3.3
CHPT1-205ENST00000549872 BLMP54132 1417 aaPredicted RBP35.63■■■■□ 3.29
CHPT1-205ENST00000549872 INSRP06213 1382 aa35.63■■■■□ 3.29
CHPT1-205ENST00000549872 POLR3AO14802 1390 aaPredicted RBP35.62■■■■□ 3.29
CHPT1-205ENST00000549872 RGPD8O14715 1765 aaPredicted RBP35.61■■■■□ 3.29
CHPT1-205ENST00000549872 MTHFSP49914 203 aa35.61■■■■□ 3.29
CHPT1-205ENST00000549872 RBM33Q96EV2 1170 aaKnown RBP35.61■■■■□ 3.29
CHPT1-205ENST00000549872 NALCNQ8IZF0 1738 aa35.6■■■■□ 3.29
CHPT1-205ENST00000549872 NKTRP30414 1462 aaKnown RBP35.6■■■■□ 3.29
CHPT1-205ENST00000549872 PLEKHG3A1L390 1219 aa35.59■■■■□ 3.29
CHPT1-205ENST00000549872 HSPA2P54652 639 aa35.58■■■■□ 3.29
CHPT1-205ENST00000549872 ZNF692Q9BU19 519 aaPredicted RBP35.58■■■■□ 3.29
CHPT1-205ENST00000549872 ACEP12821 1306 aa35.58■■■■□ 3.29
CHPT1-205ENST00000549872 FMN2Q9NZ56 1722 aa35.56■■■■□ 3.28
CHPT1-205ENST00000549872 NWD1Q149M9 1564 aa35.54■■■■□ 3.28
CHPT1-205ENST00000549872 NME9Q86XW9 330 aa35.54■■■■□ 3.28
CHPT1-205ENST00000549872 SHPRHQ149N8 1683 aa35.53■■■■□ 3.28
CHPT1-205ENST00000549872 SALL2Q9Y467 1007 aaPredicted RBP35.52■■■■□ 3.28
CHPT1-205ENST00000549872 PMFBP1Q8TBY8 1022 aa35.51■■■■□ 3.28
CHPT1-205ENST00000549872 NRKQ7Z2Y5 1582 aa35.5■■■■□ 3.27
CHPT1-205ENST00000549872 ANKARQ7Z5J8 1434 aa35.5■■■■□ 3.27
CHPT1-205ENST00000549872 CFAP53Q96M91 514 aa35.49■■■■□ 3.27
CHPT1-205ENST00000549872 ZRANB1Q9UGI0 708 aa35.49■■■■□ 3.27
CHPT1-205ENST00000549872 LMTK3Q96Q04 1460 aa35.47■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms