RNA–Protein interactions for RNA: ENST00000549421.1

TSPAN8-204, Transcript of tetraspanin 8, humanhuman

TSL 3

Gene TSPAN8, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-204ENST00000549421 SMAPO00193 183 aa7.02□□□□□ -1.29
TSPAN8-204ENST00000549421 BRD1O95696 1058 aa7.02□□□□□ -1.29
TSPAN8-204ENST00000549421 ATP6V1AP38606 617 aa7.02□□□□□ -1.29
TSPAN8-204ENST00000549421 PBX2P40425 430 aa7.02□□□□□ -1.29
TSPAN8-204ENST00000549421 Q3C1V9 767 aa7.02□□□□□ -1.29
TSPAN8-204ENST00000549421 TMCO4Q5TGY1 634 aa7.02□□□□□ -1.29
TSPAN8-204ENST00000549421 ZNF592Q92610 1267 aa7.02□□□□□ -1.29
TSPAN8-204ENST00000549421 PRR14Q9BWN1 585 aa7.02□□□□□ -1.29
TSPAN8-204ENST00000549421 C6orf229H3BNL8 230 aa7.01□□□□□ -1.29
TSPAN8-204ENST00000549421 SLC10A3P09131 477 aa7.01□□□□□ -1.29
TSPAN8-204ENST00000549421 CTDSPL2Q05D32 466 aa7.01□□□□□ -1.29
TSPAN8-204ENST00000549421 DESI1Q6ICB0 168 aa7.01□□□□□ -1.29
TSPAN8-204ENST00000549421 TRIM34Q9BYJ4 488 aa7.01□□□□□ -1.29
TSPAN8-204ENST00000549421 NBPF3Q9H094 633 aa7.01□□□□□ -1.29
TSPAN8-204ENST00000549421 PCDHGC3Q9UN70 934 aa7.01□□□□□ -1.29
TSPAN8-204ENST00000549421 ARHGAP33O14559 1287 aa7□□□□□ -1.29
TSPAN8-204ENST00000549421 B4GALNT3Q6L9W6 998 aa7□□□□□ -1.29
TSPAN8-204ENST00000549421 PPP1R12CQ9BZL4 782 aa7□□□□□ -1.29
TSPAN8-204ENST00000549421 ALG2Q9H553 416 aa7□□□□□ -1.29
TSPAN8-204ENST00000549421 CFHP08603 1231 aa6.99□□□□□ -1.29
TSPAN8-204ENST00000549421 POTEJP0CG39 1038 aa6.99□□□□□ -1.29
TSPAN8-204ENST00000549421 EIF4G2P78344 907 aaKnown RBP eCLIP6.99□□□□□ -1.29
TSPAN8-204ENST00000549421 RETREG3Q86VR2 466 aa6.99□□□□□ -1.29
TSPAN8-204ENST00000549421 TSC1Q92574 1164 aa6.99□□□□□ -1.29
TSPAN8-204ENST00000549421 SEMA3FQ13275 785 aa6.98□□□□□ -1.29
TSPAN8-204ENST00000549421 CFAP70Q5T0N1 1121 aa6.98□□□□□ -1.29
TSPAN8-204ENST00000549421 HMX1Q9NP08 348 aaPredicted RBP6.98□□□□□ -1.29
TSPAN8-204ENST00000549421 CFAP99D6REC4 459 aa6.97□□□□□ -1.29
TSPAN8-204ENST00000549421 VAC14Q08AM6 782 aa6.97□□□□□ -1.29
TSPAN8-204ENST00000549421 FUT2Q10981 343 aa6.97□□□□□ -1.29
TSPAN8-204ENST00000549421 PRR7Q8TB68 274 aa6.97□□□□□ -1.29
TSPAN8-204ENST00000549421 ZC3H4Q9UPT8 1303 aaKnown RBP6.97□□□□□ -1.29
TSPAN8-204ENST00000549421 PALM3A6NDB9 673 aaPredicted RBP6.96□□□□□ -1.3
TSPAN8-204ENST00000549421 GPR37L1O60883 481 aa6.96□□□□□ -1.3
TSPAN8-204ENST00000549421 ATG7O95352 703 aa6.96□□□□□ -1.3
TSPAN8-204ENST00000549421 ADAMTS19Q8TE59 1207 aa6.96□□□□□ -1.3
TSPAN8-204ENST00000549421 SRPK2P78362 688 aaKnown RBP6.95□□□□□ -1.3
TSPAN8-204ENST00000549421 GUCA2AQ02747 115 aa6.95□□□□□ -1.3
TSPAN8-204ENST00000549421 NFATC2IPQ8NCF5 419 aa6.95□□□□□ -1.3
TSPAN8-204ENST00000549421 LRRN4Q8WUT4 740 aa6.95□□□□□ -1.3
TSPAN8-204ENST00000549421 GZF1Q9H116 711 aaPredicted RBP6.95□□□□□ -1.3
TSPAN8-204ENST00000549421 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.94□□□□□ -1.3
TSPAN8-204ENST00000549421 ACTN4O43707 911 aaKnown RBP6.94□□□□□ -1.3
TSPAN8-204ENST00000549421 MCCD1P59942 119 aaPredicted RBP6.94□□□□□ -1.3
TSPAN8-204ENST00000549421 SEPT9Q9UHD8 586 aaPredicted RBP6.94□□□□□ -1.3
TSPAN8-204ENST00000549421 SALL2Q9Y467 1007 aaPredicted RBP6.94□□□□□ -1.3
TSPAN8-204ENST00000549421 TK2O00142 265 aa6.93□□□□□ -1.3
TSPAN8-204ENST00000549421 RFX1P22670 979 aa6.93□□□□□ -1.3
TSPAN8-204ENST00000549421 LMOD1P29536 600 aaPredicted RBP6.93□□□□□ -1.3
TSPAN8-204ENST00000549421 MFAP1P55081 439 aaKnown RBP6.93□□□□□ -1.3
TSPAN8-204ENST00000549421 NR1H3Q13133 447 aa6.93□□□□□ -1.3
TSPAN8-204ENST00000549421 SAMD7Q7Z3H4 446 aa6.93□□□□□ -1.3
TSPAN8-204ENST00000549421 VPS9D1Q9Y2B5 631 aa6.93□□□□□ -1.3
TSPAN8-204ENST00000549421 ERBB3P21860 1342 aa6.93□□□□□ -1.3
TSPAN8-204ENST00000549421 POTEB2H3BUK9 544 aa6.92□□□□□ -1.3
TSPAN8-204ENST00000549421 ATP9BO43861 1147 aa6.92□□□□□ -1.3
TSPAN8-204ENST00000549421 PSEN2P49810 448 aa6.92□□□□□ -1.3
TSPAN8-204ENST00000549421 MORN1Q5T089 497 aa6.92□□□□□ -1.3
TSPAN8-204ENST00000549421 LYPD8Q6UX82 237 aa6.92□□□□□ -1.3
TSPAN8-204ENST00000549421 HLA-CQ95604 372 aa6.92□□□□□ -1.3
TSPAN8-204ENST00000549421 RNF40O75150 1001 aa6.91□□□□□ -1.3
TSPAN8-204ENST00000549421 ELOAQ14241 798 aaKnown RBP6.91□□□□□ -1.3
TSPAN8-204ENST00000549421 NR6A1Q15406 480 aa6.91□□□□□ -1.3
TSPAN8-204ENST00000549421 LRCH3Q96II8 777 aa6.91□□□□□ -1.3
TSPAN8-204ENST00000549421 TFIP11Q9UBB9 837 aaKnown RBP6.91□□□□□ -1.3
TSPAN8-204ENST00000549421 MAFBQ9Y5Q3 323 aaPredicted RBP6.91□□□□□ -1.3
TSPAN8-204ENST00000549421 ZBBXA8MT70 800 aa6.9□□□□□ -1.3
TSPAN8-204ENST00000549421 RGS22Q8NE09 1264 aa6.9□□□□□ -1.3
TSPAN8-204ENST00000549421 ARMC2Q8NEN0 867 aa6.9□□□□□ -1.3
TSPAN8-204ENST00000549421 GPKOWQ92917 476 aaPredicted RBP eCLIP6.9□□□□□ -1.3
TSPAN8-204ENST00000549421 ZFRQ96KR1 1074 aaKnown RBP6.9□□□□□ -1.3
TSPAN8-204ENST00000549421 UCN2Q96RP3 112 aa6.9□□□□□ -1.3
TSPAN8-204ENST00000549421 VRTNQ9H8Y1 702 aa6.9□□□□□ -1.3
TSPAN8-204ENST00000549421 LZTS3O60299 673 aaPredicted RBP6.89□□□□□ -1.31
TSPAN8-204ENST00000549421 VARS2Q5ST30 1063 aaKnown RBP6.89□□□□□ -1.31
TSPAN8-204ENST00000549421 MRPL50Q8N5N7 158 aaKnown RBP6.89□□□□□ -1.31
TSPAN8-204ENST00000549421 USB1Q9BQ65 265 aaKnown RBP6.89□□□□□ -1.31
TSPAN8-204ENST00000549421 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.89□□□□□ -1.31
TSPAN8-204ENST00000549421 GPSM3Q9Y4H4 160 aa6.89□□□□□ -1.31
TSPAN8-204ENST00000549421 BHMG1C9JSJ3 638 aaPredicted RBP6.88□□□□□ -1.31
TSPAN8-204ENST00000549421 PTPRNQ16849 979 aa6.88□□□□□ -1.31
TSPAN8-204ENST00000549421 PLEKHM2Q8IWE5 1019 aa6.88□□□□□ -1.31
TSPAN8-204ENST00000549421 ZNF687Q8N1G0 1237 aa6.88□□□□□ -1.31
TSPAN8-204ENST00000549421 FKBPLQ9UIM3 349 aa6.88□□□□□ -1.31
TSPAN8-204ENST00000549421 SLC27A5Q9Y2P5 690 aa6.88□□□□□ -1.31
TSPAN8-204ENST00000549421 NR1I2O75469 434 aa6.87□□□□□ -1.31
TSPAN8-204ENST00000549421 FMNL1O95466 1100 aaPredicted RBP6.87□□□□□ -1.31
TSPAN8-204ENST00000549421 DMRTA1Q5VZB9 504 aa6.87□□□□□ -1.31
TSPAN8-204ENST00000549421 EPS8L1Q8TE68 723 aa6.87□□□□□ -1.31
TSPAN8-204ENST00000549421 GNEQ9Y223 722 aaKnown RBP6.87□□□□□ -1.31
TSPAN8-204ENST00000549421 AMOTL2Q9Y2J4 779 aa6.87□□□□□ -1.31
TSPAN8-204ENST00000549421 PER1O15534 1290 aaPredicted RBP6.86□□□□□ -1.31
TSPAN8-204ENST00000549421 SND1Q7KZF4 910 aaKnown RBP eCLIP6.86□□□□□ -1.31
TSPAN8-204ENST00000549421 SYMPKQ92797 1274 aaKnown RBP6.86□□□□□ -1.31
TSPAN8-204ENST00000549421 TMEM88BA6NKF7 163 aa6.85□□□□□ -1.31
TSPAN8-204ENST00000549421 JUNDP17535 347 aa6.85□□□□□ -1.31
TSPAN8-204ENST00000549421 CCDC27Q2M243 656 aa6.85□□□□□ -1.31
TSPAN8-204ENST00000549421 NBPF14Q5TI25 921 aa6.85□□□□□ -1.31
TSPAN8-204ENST00000549421 BRICD5Q6PL45 260 aa6.85□□□□□ -1.31
TSPAN8-204ENST00000549421 TBC1D9Q6ZT07 1266 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms