RNA–Protein interactions for RNA: ENST00000549421.1

TSPAN8-204, Transcript of tetraspanin 8, humanhuman

TSL 3

Gene TSPAN8, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-204ENST00000549421 CHIC1Q5VXU3 224 aa15.36■□□□□ 0.05
TSPAN8-204ENST00000549421 AEBP2Q6ZN18 517 aaPredicted RBP15.03■□□□□ -0
TSPAN8-204ENST00000549421 PHF23Q9BUL5 403 aaPredicted RBP13.43□□□□□ -0.26
TSPAN8-204ENST00000549421 SENP3Q9H4L4 574 aaPredicted RBP12.88□□□□□ -0.35
TSPAN8-204ENST00000549421 PLPPR3Q6T4P5 718 aa12.78□□□□□ -0.36
TSPAN8-204ENST00000549421 FOXD1Q16676 465 aa11.74□□□□□ -0.53
TSPAN8-204ENST00000549421 ADRA2BP18089 450 aa11.72□□□□□ -0.53
TSPAN8-204ENST00000549421 PPP6R1Q9UPN7 881 aa11.63□□□□□ -0.55
TSPAN8-204ENST00000549421 KCNA4P22459 653 aa11.52□□□□□ -0.57
TSPAN8-204ENST00000549421 EHMT2Q96KQ7 1210 aa11.35□□□□□ -0.59
TSPAN8-204ENST00000549421 NCBP3Q53F19 620 aaKnown RBP11.26□□□□□ -0.61
TSPAN8-204ENST00000549421 PIAS4Q8N2W9 510 aaPredicted RBP11.26□□□□□ -0.61
TSPAN8-204ENST00000549421 PPP4R3CPQ6ZMV5 832 aa11.25□□□□□ -0.61
TSPAN8-204ENST00000549421 SLC4A1APQ9BWU0 796 aaKnown RBP11.16□□□□□ -0.62
TSPAN8-204ENST00000549421 CSRNP3Q8WYN3 585 aa11□□□□□ -0.65
TSPAN8-204ENST00000549421 SCAF1Q9H7N4 1312 aaKnown RBP10.95□□□□□ -0.66
TSPAN8-204ENST00000549421 NPM3O75607 178 aaKnown RBP10.92□□□□□ -0.66
TSPAN8-204ENST00000549421 CNKSR2Q8WXI2 1034 aa10.89□□□□□ -0.67
TSPAN8-204ENST00000549421 MSH5O43196 834 aa10.79□□□□□ -0.68
TSPAN8-204ENST00000549421 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
TSPAN8-204ENST00000549421 FOXD4L1Q9NU39 408 aa10.58□□□□□ -0.72
TSPAN8-204ENST00000549421 ZBTB22O15209 634 aa10.56□□□□□ -0.72
TSPAN8-204ENST00000549421 RNF216Q9NWF9 866 aaPredicted RBP10.54□□□□□ -0.72
TSPAN8-204ENST00000549421 MAPK8IP2Q13387 824 aaPredicted RBP10.39□□□□□ -0.75
TSPAN8-204ENST00000549421 HOXD11P31277 338 aaPredicted RBP10.34□□□□□ -0.75
TSPAN8-204ENST00000549421 DMRT2Q9Y5R5 561 aa10.33□□□□□ -0.76
TSPAN8-204ENST00000549421 ATXN8OSP0DMR3 200 aa10.25□□□□□ -0.77
TSPAN8-204ENST00000549421 MYCNP04198 464 aaPredicted RBP10.19□□□□□ -0.78
TSPAN8-204ENST00000549421 AMER1Q5JTC6 1135 aaPredicted RBP10.15□□□□□ -0.78
TSPAN8-204ENST00000549421 SLC4A2P04920 1241 aa10.14□□□□□ -0.79
TSPAN8-204ENST00000549421 SLC24A1O60721 1099 aa9.98□□□□□ -0.81
TSPAN8-204ENST00000549421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.96□□□□□ -0.82
TSPAN8-204ENST00000549421 HNRNPUL2Q1KMD3 747 aaKnown RBP9.96□□□□□ -0.82
TSPAN8-204ENST00000549421 FKBP8Q14318 412 aa9.94□□□□□ -0.82
TSPAN8-204ENST00000549421 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
TSPAN8-204ENST00000549421 SAMD1Q6SPF0 538 aaPredicted RBP9.9□□□□□ -0.82
TSPAN8-204ENST00000549421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.84□□□□□ -0.83
TSPAN8-204ENST00000549421 DCAF8L1A6NGE4 600 aa9.78□□□□□ -0.84
TSPAN8-204ENST00000549421 APLP2Q06481 763 aa9.78□□□□□ -0.84
TSPAN8-204ENST00000549421 U3KPZ7 1027 aaPredicted RBP9.68□□□□□ -0.86
TSPAN8-204ENST00000549421 ATF5Q9Y2D1 282 aaPredicted RBP9.66□□□□□ -0.86
TSPAN8-204ENST00000549421 FBXO3Q9UK99 471 aa9.62□□□□□ -0.87
TSPAN8-204ENST00000549421 ZNF219Q9P2Y4 722 aaPredicted RBP9.59□□□□□ -0.87
TSPAN8-204ENST00000549421 SPDYE4A6NLX3 237 aa9.47□□□□□ -0.89
TSPAN8-204ENST00000549421 FBLN2P98095 1184 aa9.46□□□□□ -0.9
TSPAN8-204ENST00000549421 PROM2Q8N271 834 aa9.42□□□□□ -0.9
TSPAN8-204ENST00000549421 VASPP50552 380 aaPredicted RBP9.35□□□□□ -0.91
TSPAN8-204ENST00000549421 ZBTB12Q9Y330 459 aaPredicted RBP9.34□□□□□ -0.91
TSPAN8-204ENST00000549421 MKRN4PQ13434 485 aaPredicted RBP9.32□□□□□ -0.92
TSPAN8-204ENST00000549421 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
TSPAN8-204ENST00000549421 TRHP20396 242 aaPredicted RBP9.26□□□□□ -0.93
TSPAN8-204ENST00000549421 POLA2Q14181 598 aa9.25□□□□□ -0.93
TSPAN8-204ENST00000549421 CAPN15O75808 1086 aa9.21□□□□□ -0.94
TSPAN8-204ENST00000549421 C1QBPQ07021 282 aaKnown RBP9.21□□□□□ -0.94
TSPAN8-204ENST00000549421 RNF39Q9H2S5 420 aa9.21□□□□□ -0.94
TSPAN8-204ENST00000549421 IFNLR1Q8IU57 520 aaPredicted RBP9.19□□□□□ -0.94
TSPAN8-204ENST00000549421 SPINK5Q9NQ38 1064 aaPredicted RBP9.18□□□□□ -0.94
TSPAN8-204ENST00000549421 DCAF8L2P0C7V8 631 aa9.15□□□□□ -0.94
TSPAN8-204ENST00000549421 STAG3Q9UJ98 1225 aa9.14□□□□□ -0.95
TSPAN8-204ENST00000549421 SPOCK2Q92563 424 aa9.11□□□□□ -0.95
TSPAN8-204ENST00000549421 HAP1P54257 671 aaPredicted RBP9.1□□□□□ -0.95
TSPAN8-204ENST00000549421 PKD2Q13563 968 aa9.09□□□□□ -0.95
TSPAN8-204ENST00000549421 VSIG10Q8N0Z9 540 aa9.08□□□□□ -0.96
TSPAN8-204ENST00000549421 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.08□□□□□ -0.96
TSPAN8-204ENST00000549421 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
TSPAN8-204ENST00000549421 BCANQ96GW7 911 aa9.07□□□□□ -0.96
TSPAN8-204ENST00000549421 SPDYE2BA6NHP3 402 aa9.06□□□□□ -0.96
TSPAN8-204ENST00000549421 SPDYE6P0CI01 402 aa9.06□□□□□ -0.96
TSPAN8-204ENST00000549421 SPDYE2Q495Y8 402 aa9.06□□□□□ -0.96
TSPAN8-204ENST00000549421 BBXQ8WY36 941 aaPredicted RBP9.03□□□□□ -0.96
TSPAN8-204ENST00000549421 ZNF692Q9BU19 519 aaPredicted RBP9.03□□□□□ -0.96
TSPAN8-204ENST00000549421 ZBTB47Q9UFB7 747 aaPredicted RBP9.01□□□□□ -0.97
TSPAN8-204ENST00000549421 ABCB7O75027 752 aa9□□□□□ -0.97
TSPAN8-204ENST00000549421 ECM2O94769 699 aaPredicted RBP9□□□□□ -0.97
TSPAN8-204ENST00000549421 PLEKHG5O94827 1062 aa9□□□□□ -0.97
TSPAN8-204ENST00000549421 PLCD3Q8N3E9 789 aa9□□□□□ -0.97
TSPAN8-204ENST00000549421 SSUH2Q9Y2M2 353 aa8.99□□□□□ -0.97
TSPAN8-204ENST00000549421 TRIM41Q8WV44 630 aa8.95□□□□□ -0.98
TSPAN8-204ENST00000549421 DSG3P32926 999 aa8.92□□□□□ -0.98
TSPAN8-204ENST00000549421 MIER1Q8N108 512 aa8.92□□□□□ -0.98
TSPAN8-204ENST00000549421 PABPN1Q86U42 306 aaKnown RBP eCLIP8.9□□□□□ -0.98
TSPAN8-204ENST00000549421 OSCARQ8IYS5 282 aa8.9□□□□□ -0.98
TSPAN8-204ENST00000549421 PAXIP1Q6ZW49 1069 aaPredicted RBP8.88□□□□□ -0.99
TSPAN8-204ENST00000549421 SPRYD3Q8NCJ5 442 aa8.87□□□□□ -0.99
TSPAN8-204ENST00000549421 CFAP44Q96MT7 982 aa8.83□□□□□ -1
TSPAN8-204ENST00000549421 TAOK2Q9UL54 1235 aa8.83□□□□□ -1
TSPAN8-204ENST00000549421 RGL2O15211 777 aa8.82□□□□□ -1
TSPAN8-204ENST00000549421 NPM1P06748 294 aaKnown RBP eCLIP8.81□□□□□ -1
TSPAN8-204ENST00000549421 CIZ1Q9ULV3 898 aaPredicted RBP8.81□□□□□ -1
TSPAN8-204ENST00000549421 GSE1Q14687 1217 aa8.79□□□□□ -1
TSPAN8-204ENST00000549421 CHGAP10645 457 aaKnown RBP8.76□□□□□ -1.01
TSPAN8-204ENST00000549421 KDM2AQ9Y2K7 1162 aa8.76□□□□□ -1.01
TSPAN8-204ENST00000549421 HS6ST3Q8IZP7 471 aa8.75□□□□□ -1.01
TSPAN8-204ENST00000549421 DNAJC5Q9H3Z4 198 aa8.75□□□□□ -1.01
TSPAN8-204ENST00000549421 POTEDQ86YR6 584 aa8.72□□□□□ -1.01
TSPAN8-204ENST00000549421 TSHZ2Q9NRE2 1034 aa8.68□□□□□ -1.02
TSPAN8-204ENST00000549421 NBR1Q14596 966 aa8.67□□□□□ -1.02
TSPAN8-204ENST00000549421 TPRNQ4KMQ1 711 aa8.66□□□□□ -1.02
TSPAN8-204ENST00000549421 SPDYE1Q8NFV5 336 aaPredicted RBP8.66□□□□□ -1.02
TSPAN8-204ENST00000549421 RBM42Q9BTD8 480 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms