RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 CPS1P31327 1500 aa18.6■□□□□ 0.57
SMPDL3B-205ENST00000548116 AMER1Q5JTC6 1135 aaPredicted RBP18.59■□□□□ 0.57
SMPDL3B-205ENST00000548116 SIRT1Q96EB6 747 aa18.59■□□□□ 0.57
SMPDL3B-205ENST00000548116 MRS2Q9HD23 443 aa18.59■□□□□ 0.57
SMPDL3B-205ENST00000548116 FAM135BQ49AJ0 1406 aa18.58■□□□□ 0.56
SMPDL3B-205ENST00000548116 CARD14Q9BXL6 1004 aa18.58■□□□□ 0.56
SMPDL3B-205ENST00000548116 CABP2Q9NPB3 220 aa18.58■□□□□ 0.56
SMPDL3B-205ENST00000548116 MYBBP1AQ9BQG0 1328 aaKnown RBP18.57■□□□□ 0.56
SMPDL3B-205ENST00000548116 SLC26A8Q96RN1 970 aa18.57■□□□□ 0.56
SMPDL3B-205ENST00000548116 SLC12A5Q9H2X9 1139 aa18.57■□□□□ 0.56
SMPDL3B-205ENST00000548116 KNSTRNQ9Y448 316 aa18.57■□□□□ 0.56
SMPDL3B-205ENST00000548116 PTPRUQ92729 1446 aa18.57■□□□□ 0.56
SMPDL3B-205ENST00000548116 CC2D1BQ5T0F9 858 aaKnown RBP18.57■□□□□ 0.56
SMPDL3B-205ENST00000548116 TBX22Q9Y458 520 aa18.57■□□□□ 0.56
SMPDL3B-205ENST00000548116 DIP2AQ14689 1571 aa18.55■□□□□ 0.56
SMPDL3B-205ENST00000548116 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
SMPDL3B-205ENST00000548116 ROBO2Q9HCK4 1378 aa18.54■□□□□ 0.56
SMPDL3B-205ENST00000548116 TMC1Q8TDI8 760 aa18.54■□□□□ 0.56
SMPDL3B-205ENST00000548116 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
SMPDL3B-205ENST00000548116 CDK19Q9BWU1 502 aa18.53■□□□□ 0.56
SMPDL3B-205ENST00000548116 BRD4O60885 1362 aaPredicted RBP18.52■□□□□ 0.56
SMPDL3B-205ENST00000548116 ATAD2Q6PL18 1390 aa18.52■□□□□ 0.55
SMPDL3B-205ENST00000548116 ANKLE2Q86XL3 938 aa18.51■□□□□ 0.55
SMPDL3B-205ENST00000548116 NINLQ9Y2I6 1382 aa18.5■□□□□ 0.55
SMPDL3B-205ENST00000548116 NLRP13Q86W25 1043 aa18.5■□□□□ 0.55
SMPDL3B-205ENST00000548116 ANKRD36BQ8N2N9 1353 aa18.5■□□□□ 0.55
SMPDL3B-205ENST00000548116 NSD3Q9BZ95 1437 aa18.5■□□□□ 0.55
SMPDL3B-205ENST00000548116 FAM9BQ8IZU0 186 aa18.49■□□□□ 0.55
SMPDL3B-205ENST00000548116 AMOTL2Q9Y2J4 779 aa18.49■□□□□ 0.55
SMPDL3B-205ENST00000548116 XRN1Q8IZH2 1706 aaKnown RBP18.48■□□□□ 0.55
SMPDL3B-205ENST00000548116 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.48■□□□□ 0.55
SMPDL3B-205ENST00000548116 CD163L1Q9NR16 1453 aa18.48■□□□□ 0.55
SMPDL3B-205ENST00000548116 USP32Q8NFA0 1604 aa18.47■□□□□ 0.55
SMPDL3B-205ENST00000548116 WASLO00401 505 aaPredicted RBP18.47■□□□□ 0.55
SMPDL3B-205ENST00000548116 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
SMPDL3B-205ENST00000548116 PTCH1Q13635 1447 aa18.47■□□□□ 0.55
SMPDL3B-205ENST00000548116 ADGRB2O60241 1585 aa18.46■□□□□ 0.55
SMPDL3B-205ENST00000548116 A0A1W2PP64 1363 aa18.46■□□□□ 0.55
SMPDL3B-205ENST00000548116 PIK3R4Q99570 1358 aa18.46■□□□□ 0.55
SMPDL3B-205ENST00000548116 PPP2R1AP30153 589 aa18.44■□□□□ 0.54
SMPDL3B-205ENST00000548116 CABP1Q9NZU7 370 aa18.43■□□□□ 0.54
SMPDL3B-205ENST00000548116 HNRNPUQ00839 825 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMPDL3B-205ENST00000548116 KDM4FA0A1W2PPD8 638 aa18.41■□□□□ 0.54
SMPDL3B-205ENST00000548116 NPHP4O75161 1426 aaPredicted RBP18.41■□□□□ 0.54
SMPDL3B-205ENST00000548116 CHD2O14647 1828 aaKnown RBP18.41■□□□□ 0.54
SMPDL3B-205ENST00000548116 KCNA6P17658 529 aa18.4■□□□□ 0.54
SMPDL3B-205ENST00000548116 TERF2IPQ9NYB0 399 aa18.4■□□□□ 0.54
SMPDL3B-205ENST00000548116 ATP7BP35670 1465 aa18.4■□□□□ 0.54
SMPDL3B-205ENST00000548116 CGNL1Q0VF96 1302 aa18.39■□□□□ 0.54
SMPDL3B-205ENST00000548116 NUDT16Q96DE0 195 aaKnown RBP18.39■□□□□ 0.53
SMPDL3B-205ENST00000548116 PRR36Q9H6K5 1346 aa18.39■□□□□ 0.53
SMPDL3B-205ENST00000548116 NCKAP5LQ9HCH0 1330 aa18.39■□□□□ 0.53
SMPDL3B-205ENST00000548116 PPIP5K1Q6PFW1 1433 aa18.38■□□□□ 0.53
SMPDL3B-205ENST00000548116 NSD2O96028 1365 aa18.37■□□□□ 0.53
SMPDL3B-205ENST00000548116 HDGFL2Q7Z4V5 671 aaPredicted RBP18.37■□□□□ 0.53
SMPDL3B-205ENST00000548116 CPSF1Q10570 1443 aaKnown RBP18.37■□□□□ 0.53
SMPDL3B-205ENST00000548116 CCDC61Q9Y6R9 512 aa18.36■□□□□ 0.53
SMPDL3B-205ENST00000548116 TOPAZ1Q8N9V7 1692 aa18.35■□□□□ 0.53
SMPDL3B-205ENST00000548116 CDC42BPGQ6DT37 1551 aa18.35■□□□□ 0.53
SMPDL3B-205ENST00000548116 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
SMPDL3B-205ENST00000548116 FYB1O15117 783 aa18.32■□□□□ 0.52
SMPDL3B-205ENST00000548116 ANKRD26Q9UPS8 1709 aa18.32■□□□□ 0.52
SMPDL3B-205ENST00000548116 AKAP12Q02952 1782 aa18.32■□□□□ 0.52
SMPDL3B-205ENST00000548116 ZBED9Q6R2W3 1325 aa18.31■□□□□ 0.52
SMPDL3B-205ENST00000548116 MON2Q7Z3U7 1717 aa18.31■□□□□ 0.52
SMPDL3B-205ENST00000548116 KIF20BQ96Q89 1820 aa18.31■□□□□ 0.52
SMPDL3B-205ENST00000548116 INSRP06213 1382 aa18.3■□□□□ 0.52
SMPDL3B-205ENST00000548116 GGNBP2Q9H3C7 697 aa18.3■□□□□ 0.52
SMPDL3B-205ENST00000548116 NWD1Q149M9 1564 aa18.3■□□□□ 0.52
SMPDL3B-205ENST00000548116 EDC4Q6P2E9 1401 aaKnown RBP18.29■□□□□ 0.52
SMPDL3B-205ENST00000548116 ITSN1Q15811 1721 aa18.29■□□□□ 0.52
SMPDL3B-205ENST00000548116 PLEKHG3A1L390 1219 aa18.29■□□□□ 0.52
SMPDL3B-205ENST00000548116 NUTM2FA1L443 756 aa18.29■□□□□ 0.52
SMPDL3B-205ENST00000548116 TNNT2P45379 298 aaPredicted RBP18.29■□□□□ 0.52
SMPDL3B-205ENST00000548116 NKTRP30414 1462 aaKnown RBP18.29■□□□□ 0.52
SMPDL3B-205ENST00000548116 SCAF1Q9H7N4 1312 aaKnown RBP18.29■□□□□ 0.52
SMPDL3B-205ENST00000548116 NALCNQ8IZF0 1738 aa18.28■□□□□ 0.52
SMPDL3B-205ENST00000548116 POLR3AO14802 1390 aaPredicted RBP18.28■□□□□ 0.52
SMPDL3B-205ENST00000548116 BLMP54132 1417 aaPredicted RBP18.28■□□□□ 0.52
SMPDL3B-205ENST00000548116 HSPA2P54652 639 aa18.27■□□□□ 0.52
SMPDL3B-205ENST00000548116 FMN2Q9NZ56 1722 aa18.27■□□□□ 0.52
SMPDL3B-205ENST00000548116 LMTK3Q96Q04 1460 aa18.27■□□□□ 0.52
SMPDL3B-205ENST00000548116 RGPD8O14715 1765 aaPredicted RBP18.27■□□□□ 0.52
SMPDL3B-205ENST00000548116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.25■□□□□ 0.51
SMPDL3B-205ENST00000548116 ZNF692Q9BU19 519 aaPredicted RBP18.25■□□□□ 0.51
SMPDL3B-205ENST00000548116 ADAMTS8Q9UP79 889 aa18.25■□□□□ 0.51
SMPDL3B-205ENST00000548116 GTF3C3Q9Y5Q9 886 aa18.25■□□□□ 0.51
SMPDL3B-205ENST00000548116 ANKARQ7Z5J8 1434 aa18.25■□□□□ 0.51
SMPDL3B-205ENST00000548116 ACEP12821 1306 aa18.24■□□□□ 0.51
SMPDL3B-205ENST00000548116 NRKQ7Z2Y5 1582 aa18.24■□□□□ 0.51
SMPDL3B-205ENST00000548116 RBM33Q96EV2 1170 aaKnown RBP18.24■□□□□ 0.51
SMPDL3B-205ENST00000548116 ADGRL3Q9HAR2 1447 aa18.23■□□□□ 0.51
SMPDL3B-205ENST00000548116 MTHFSP49914 203 aa18.23■□□□□ 0.51
SMPDL3B-205ENST00000548116 SENP3-EIF4A1A0A087X0R7 540 aa18.23■□□□□ 0.51
SMPDL3B-205ENST00000548116 SHPRHQ149N8 1683 aa18.23■□□□□ 0.51
SMPDL3B-205ENST00000548116 WDR43Q15061 677 aaKnown RBP eCLIP18.22■□□□□ 0.51
SMPDL3B-205ENST00000548116 NME9Q86XW9 330 aa18.22■□□□□ 0.51
SMPDL3B-205ENST00000548116 USP6P35125 1406 aa18.21■□□□□ 0.51
SMPDL3B-205ENST00000548116 SSH2Q76I76 1423 aa18.21■□□□□ 0.5
SMPDL3B-205ENST00000548116 STRCP1A6NGW2 1772 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms