RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 MARVELD3Q96A59 401 aa12.85□□□□□ -0.35
HIF1A-205ENST00000547430 CFAP99D6REC4 459 aa12.84□□□□□ -0.35
HIF1A-205ENST00000547430 ATP6V1AP38606 617 aa12.84□□□□□ -0.35
HIF1A-205ENST00000547430 ZFRQ96KR1 1074 aaKnown RBP12.84□□□□□ -0.35
HIF1A-205ENST00000547430 HMX1Q9NP08 348 aaPredicted RBP12.84□□□□□ -0.35
HIF1A-205ENST00000547430 FAM205CA6NFA0 338 aa12.83□□□□□ -0.36
HIF1A-205ENST00000547430 TRIM34Q9BYJ4 488 aa12.83□□□□□ -0.36
HIF1A-205ENST00000547430 C6orf229H3BNL8 230 aa12.82□□□□□ -0.36
HIF1A-205ENST00000547430 GPR37L1O60883 481 aa12.82□□□□□ -0.36
HIF1A-205ENST00000547430 RNF40O75150 1001 aa12.82□□□□□ -0.36
HIF1A-205ENST00000547430 POM121CA8CG34 1229 aa12.81□□□□□ -0.36
HIF1A-205ENST00000547430 IRF5Q13568 498 aa12.81□□□□□ -0.36
HIF1A-205ENST00000547430 KMT5BQ4FZB7 885 aa12.81□□□□□ -0.36
HIF1A-205ENST00000547430 NECTIN2Q92692 538 aa12.8□□□□□ -0.36
HIF1A-205ENST00000547430 MRPL50Q8N5N7 158 aaKnown RBP12.79□□□□□ -0.36
HIF1A-205ENST00000547430 LRRN4Q8WUT4 740 aa12.79□□□□□ -0.36
HIF1A-205ENST00000547430 GLMNQ92990 594 aa12.79□□□□□ -0.36
HIF1A-205ENST00000547430 TSC1Q92574 1164 aa12.78□□□□□ -0.36
HIF1A-205ENST00000547430 CALR3Q96L12 384 aaKnown RBP12.78□□□□□ -0.36
HIF1A-205ENST00000547430 HS3ST6Q96QI5 342 aa12.78□□□□□ -0.36
HIF1A-205ENST00000547430 POTEB3A0JP26 581 aa12.77□□□□□ -0.37
HIF1A-205ENST00000547430 ACTN4O43707 911 aaKnown RBP12.77□□□□□ -0.37
HIF1A-205ENST00000547430 TRIM26Q12899 539 aaPredicted RBP12.77□□□□□ -0.37
HIF1A-205ENST00000547430 MORN1Q5T089 497 aa12.77□□□□□ -0.37
HIF1A-205ENST00000547430 POTEBQ6S5H4 581 aa12.77□□□□□ -0.37
HIF1A-205ENST00000547430 SYMPKQ92797 1274 aaKnown RBP12.77□□□□□ -0.37
HIF1A-205ENST00000547430 WASHC4Q2M389 1173 aa12.76□□□□□ -0.37
HIF1A-205ENST00000547430 ADGRD1Q6QNK2 874 aa12.76□□□□□ -0.37
HIF1A-205ENST00000547430 LRCH3Q96II8 777 aa12.76□□□□□ -0.37
HIF1A-205ENST00000547430 PDIA4P13667 645 aaKnown RBP12.75□□□□□ -0.37
HIF1A-205ENST00000547430 RETREG3Q86VR2 466 aa12.75□□□□□ -0.37
HIF1A-205ENST00000547430 PRR7Q8TB68 274 aa12.75□□□□□ -0.37
HIF1A-205ENST00000547430 HRO43593 1189 aa12.74□□□□□ -0.37
HIF1A-205ENST00000547430 LSM11P83369 360 aaKnown RBP eCLIP12.74□□□□□ -0.37
HIF1A-205ENST00000547430 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.74□□□□□ -0.37
HIF1A-205ENST00000547430 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
HIF1A-205ENST00000547430 Q3C1V9 767 aa12.72□□□□□ -0.37
HIF1A-205ENST00000547430 PUS10Q3MIT2 529 aaKnown RBP12.72□□□□□ -0.37
HIF1A-205ENST00000547430 DESI1Q6ICB0 168 aa12.72□□□□□ -0.37
HIF1A-205ENST00000547430 ADAMTS19Q8TE59 1207 aa12.72□□□□□ -0.37
HIF1A-205ENST00000547430 EPS8L1Q8TE68 723 aa12.72□□□□□ -0.37
HIF1A-205ENST00000547430 PRR14Q9BWN1 585 aa12.72□□□□□ -0.37
HIF1A-205ENST00000547430 SLC27A5Q9Y2P5 690 aa12.72□□□□□ -0.37
HIF1A-205ENST00000547430 PER1O15534 1290 aaPredicted RBP12.69□□□□□ -0.38
HIF1A-205ENST00000547430 PPP1R15AO75807 674 aaPredicted RBP12.67□□□□□ -0.38
HIF1A-205ENST00000547430 VAC14Q08AM6 782 aa12.67□□□□□ -0.38
HIF1A-205ENST00000547430 NR6A1Q15406 480 aa12.67□□□□□ -0.38
HIF1A-205ENST00000547430 HDGFL1Q5TGJ6 251 aa12.67□□□□□ -0.38
HIF1A-205ENST00000547430 ANKK1Q8NFD2 765 aa12.67□□□□□ -0.38
HIF1A-205ENST00000547430 SOWAHBA6NEL2 793 aa12.66□□□□□ -0.38
HIF1A-205ENST00000547430 FAM163AQ96GL9 167 aaPredicted RBP12.66□□□□□ -0.38
HIF1A-205ENST00000547430 TRAIPQ9BWF2 469 aa12.66□□□□□ -0.38
HIF1A-205ENST00000547430 SALL2Q9Y467 1007 aaPredicted RBP12.66□□□□□ -0.38
HIF1A-205ENST00000547430 BLOC1S3Q6QNY0 202 aa12.65□□□□□ -0.38
HIF1A-205ENST00000547430 RNF19BQ6ZMZ0 732 aa12.65□□□□□ -0.38
HIF1A-205ENST00000547430 LCE2DQ5TA82 110 aaPredicted RBP12.64□□□□□ -0.39
HIF1A-205ENST00000547430 LYPD8Q6UX82 237 aa12.64□□□□□ -0.39
HIF1A-205ENST00000547430 ALG2Q9H553 416 aa12.64□□□□□ -0.39
HIF1A-205ENST00000547430 APLP1P51693 650 aa12.63□□□□□ -0.39
HIF1A-205ENST00000547430 PPP4CP60510 307 aa12.63□□□□□ -0.39
HIF1A-205ENST00000547430 BRICD5Q6PL45 260 aa12.63□□□□□ -0.39
HIF1A-205ENST00000547430 RETREG2Q8NC44 543 aa12.63□□□□□ -0.39
HIF1A-205ENST00000547430 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
HIF1A-205ENST00000547430 USB1Q9BQ65 265 aaKnown RBP12.62□□□□□ -0.39
HIF1A-205ENST00000547430 TSR3Q9UJK0 312 aaKnown RBP12.62□□□□□ -0.39
HIF1A-205ENST00000547430 GOLGA8CPA6NN73 597 aa12.61□□□□□ -0.39
HIF1A-205ENST00000547430 SOX11P35716 441 aa12.61□□□□□ -0.39
HIF1A-205ENST00000547430 BCAMP50895 628 aa12.61□□□□□ -0.39
HIF1A-205ENST00000547430 THAP11Q96EK4 314 aa12.61□□□□□ -0.39
HIF1A-205ENST00000547430 CFAP70Q5T0N1 1121 aa12.59□□□□□ -0.39
HIF1A-205ENST00000547430 STAC3Q96MF2 364 aa12.59□□□□□ -0.39
HIF1A-205ENST00000547430 PCDHB3Q9Y5E6 796 aa12.59□□□□□ -0.39
HIF1A-205ENST00000547430 FMNL1O95466 1100 aaPredicted RBP12.58□□□□□ -0.4
HIF1A-205ENST00000547430 SCUBE3Q8IX30 993 aa12.58□□□□□ -0.4
HIF1A-205ENST00000547430 PNMA1Q8ND90 353 aa12.58□□□□□ -0.4
HIF1A-205ENST00000547430 PBXIP1Q96AQ6 731 aa12.58□□□□□ -0.4
HIF1A-205ENST00000547430 PPP1R12CQ9BZL4 782 aa12.58□□□□□ -0.4
HIF1A-205ENST00000547430 ZBTB7CA1YPR0 619 aa12.57□□□□□ -0.4
HIF1A-205ENST00000547430 NR1I2O75469 434 aa12.57□□□□□ -0.4
HIF1A-205ENST00000547430 F12P00748 615 aaPredicted RBP12.57□□□□□ -0.4
HIF1A-205ENST00000547430 WNT2BQ93097 391 aa12.57□□□□□ -0.4
HIF1A-205ENST00000547430 ANKRD13DQ6ZTN6 518 aa12.56□□□□□ -0.4
HIF1A-205ENST00000547430 UCN2Q96RP3 112 aa12.56□□□□□ -0.4
HIF1A-205ENST00000547430 JUNDP17535 347 aa12.55□□□□□ -0.4
HIF1A-205ENST00000547430 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
HIF1A-205ENST00000547430 PTPRNQ16849 979 aa12.54□□□□□ -0.4
HIF1A-205ENST00000547430 ACIN1Q9UKV3 1341 aaKnown RBP12.54□□□□□ -0.4
HIF1A-205ENST00000547430 PALM3A6NDB9 673 aaPredicted RBP12.53□□□□□ -0.4
HIF1A-205ENST00000547430 NR1H3Q13133 447 aa12.53□□□□□ -0.4
HIF1A-205ENST00000547430 FKBPLQ9UIM3 349 aa12.53□□□□□ -0.4
HIF1A-205ENST00000547430 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.52□□□□□ -0.41
HIF1A-205ENST00000547430 SEMA3FQ13275 785 aa12.52□□□□□ -0.41
HIF1A-205ENST00000547430 KCTD17Q8N5Z5 321 aa12.52□□□□□ -0.41
HIF1A-205ENST00000547430 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.41
HIF1A-205ENST00000547430 RFX1P22670 979 aa12.51□□□□□ -0.41
HIF1A-205ENST00000547430 EIF4G2P78344 907 aaKnown RBP eCLIP12.51□□□□□ -0.41
HIF1A-205ENST00000547430 MSS51Q4VC12 460 aa12.51□□□□□ -0.41
HIF1A-205ENST00000547430 MAP10Q9P2G4 905 aa12.51□□□□□ -0.41
HIF1A-205ENST00000547430 WBP1LQ9NX94 342 aa12.5□□□□□ -0.41
HIF1A-205ENST00000547430 ZBBXA8MT70 800 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms