RNA–Protein interactions for RNA: ENST00000547179.1

LINC00485-201, long intergenic non-protein coding RNA 485, humanhuman

TSL 1 (best) BASIC

Gene LINC00485, Length 3,722 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00485-201ENST00000547179 ARHGEF28Q8N1W1 1705 aaKnown RBP15.12■□□□□ 0.01
LINC00485-201ENST00000547179 HDGFL2Q7Z4V5 671 aaPredicted RBP15.12■□□□□ 0.01
LINC00485-201ENST00000547179 WAPLQ7Z5K2 1190 aa15.12■□□□□ 0.01
LINC00485-201ENST00000547179 TECPR2O15040 1411 aa15.12■□□□□ 0.01
LINC00485-201ENST00000547179 CDK19Q9BWU1 502 aa15.12■□□□□ 0.01
LINC00485-201ENST00000547179 NPHP4O75161 1426 aaPredicted RBP15.12■□□□□ 0.01
LINC00485-201ENST00000547179 CABP2Q9NPB3 220 aa15.11■□□□□ 0.01
LINC00485-201ENST00000547179 NRXN3Q9Y4C0 1643 aa15.09■□□□□ 0.01
LINC00485-201ENST00000547179 WASLO00401 505 aaPredicted RBP15.09■□□□□ 0.01
LINC00485-201ENST00000547179 YTHDC1Q96MU7 727 aaKnown RBP15.09■□□□□ 0.01
LINC00485-201ENST00000547179 MRS2Q9HD23 443 aa15.08■□□□□ 0.01
LINC00485-201ENST00000547179 MED14O60244 1454 aa15.08■□□□□ 0.01
LINC00485-201ENST00000547179 C14orf37Q86TY3 774 aa15.08■□□□□ 0
LINC00485-201ENST00000547179 NCKAP5LQ9HCH0 1330 aa15.08■□□□□ 0
LINC00485-201ENST00000547179 KDM4FA0A1W2PPD8 638 aa15.07■□□□□ 0
LINC00485-201ENST00000547179 CPS1P31327 1500 aa15.06■□□□□ 0
LINC00485-201ENST00000547179 CC2D1BQ5T0F9 858 aaKnown RBP15.06■□□□□ 0
LINC00485-201ENST00000547179 KNDC1Q76NI1 1749 aa15.06■□□□□ 0
LINC00485-201ENST00000547179 MYBBP1AQ9BQG0 1328 aaKnown RBP15.06■□□□□ 0
LINC00485-201ENST00000547179 SLC12A5Q9H2X9 1139 aa15.06■□□□□ 0
LINC00485-201ENST00000547179 PTCH1Q13635 1447 aa15.06■□□□□ 0
LINC00485-201ENST00000547179 SETD1AO15047 1707 aaKnown RBP15.05■□□□□ 0
LINC00485-201ENST00000547179 CGNL1Q0VF96 1302 aa15.05■□□□□ 0
LINC00485-201ENST00000547179 KCNA6P17658 529 aa15.05■□□□□ -0
LINC00485-201ENST00000547179 ROBO2Q9HCK4 1378 aa15.04■□□□□ -0
LINC00485-201ENST00000547179 PLEKHH1Q9ULM0 1364 aa15.04■□□□□ -0
LINC00485-201ENST00000547179 PER1O15534 1290 aaPredicted RBP15.04■□□□□ -0
LINC00485-201ENST00000547179 ANKRD36BQ8N2N9 1353 aa15.04■□□□□ -0
LINC00485-201ENST00000547179 CCDC61Q9Y6R9 512 aa15.04■□□□□ -0
LINC00485-201ENST00000547179 NLRP13Q86W25 1043 aa15.03■□□□□ -0
LINC00485-201ENST00000547179 TULP4Q9NRJ4 1543 aa15.03■□□□□ -0
LINC00485-201ENST00000547179 NPC1L1Q9UHC9 1359 aa15.03■□□□□ -0
LINC00485-201ENST00000547179 NUDT16Q96DE0 195 aaKnown RBP15.03■□□□□ -0
LINC00485-201ENST00000547179 MORC1Q86VD1 984 aa15.01□□□□□ -0.01
LINC00485-201ENST00000547179 PROSER2Q86WR7 435 aaPredicted RBP15.01□□□□□ -0.01
LINC00485-201ENST00000547179 ZNF692Q9BU19 519 aaPredicted RBP15.01□□□□□ -0.01
LINC00485-201ENST00000547179 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
LINC00485-201ENST00000547179 CABP1Q9NZU7 370 aa15.01□□□□□ -0.01
LINC00485-201ENST00000547179 PTPRUQ92729 1446 aa15.01□□□□□ -0.01
LINC00485-201ENST00000547179 HSPA2P54652 639 aa15□□□□□ -0.01
LINC00485-201ENST00000547179 NSD3Q9BZ95 1437 aa15□□□□□ -0.01
LINC00485-201ENST00000547179 BRD4O60885 1362 aaPredicted RBP15□□□□□ -0.01
LINC00485-201ENST00000547179 NSD2O96028 1365 aa15□□□□□ -0.01
LINC00485-201ENST00000547179 PARD3Q8TEW0 1356 aa14.98□□□□□ -0.01
LINC00485-201ENST00000547179 AMER1Q5JTC6 1135 aaPredicted RBP14.98□□□□□ -0.01
LINC00485-201ENST00000547179 FAM9BQ8IZU0 186 aa14.97□□□□□ -0.01
LINC00485-201ENST00000547179 PPIP5K1Q6PFW1 1433 aa14.97□□□□□ -0.01
LINC00485-201ENST00000547179 ATP7BP35670 1465 aa14.96□□□□□ -0.01
LINC00485-201ENST00000547179 NGDNQ8NEJ9 315 aaKnown RBP14.96□□□□□ -0.01
LINC00485-201ENST00000547179 CFAP53Q96M91 514 aa14.96□□□□□ -0.01
LINC00485-201ENST00000547179 CARD14Q9BXL6 1004 aa14.95□□□□□ -0.02
LINC00485-201ENST00000547179 A0A1W2PP64 1363 aa14.94□□□□□ -0.02
LINC00485-201ENST00000547179 MYOM1P52179 1685 aa14.94□□□□□ -0.02
LINC00485-201ENST00000547179 XRN1Q8IZH2 1706 aaKnown RBP14.94□□□□□ -0.02
LINC00485-201ENST00000547179 NUTM2FA1L443 756 aa14.94□□□□□ -0.02
LINC00485-201ENST00000547179 ADGRB2O60241 1585 aa14.94□□□□□ -0.02
LINC00485-201ENST00000547179 WDR43Q15061 677 aaKnown RBP eCLIP14.93□□□□□ -0.02
LINC00485-201ENST00000547179 ANKARQ7Z5J8 1434 aa14.93□□□□□ -0.02
LINC00485-201ENST00000547179 NKTRP30414 1462 aaKnown RBP14.92□□□□□ -0.02
LINC00485-201ENST00000547179 PLEKHG3A1L390 1219 aa14.92□□□□□ -0.02
LINC00485-201ENST00000547179 ATF3P18847 181 aa14.92□□□□□ -0.02
LINC00485-201ENST00000547179 PPP2R1AP30153 589 aa14.92□□□□□ -0.02
LINC00485-201ENST00000547179 CHD2O14647 1828 aaKnown RBP14.92□□□□□ -0.02
LINC00485-201ENST00000547179 LMTK3Q96Q04 1460 aa14.91□□□□□ -0.02
LINC00485-201ENST00000547179 ADGRL3Q9HAR2 1447 aa14.91□□□□□ -0.02
LINC00485-201ENST00000547179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.91□□□□□ -0.02
LINC00485-201ENST00000547179 C19orf44Q9H6X5 657 aa14.91□□□□□ -0.02
LINC00485-201ENST00000547179 EDC4Q6P2E9 1401 aaKnown RBP14.9□□□□□ -0.02
LINC00485-201ENST00000547179 HNRNPUQ00839 825 aaKnown RBP eCLIP14.9□□□□□ -0.02
LINC00485-201ENST00000547179 COG3Q96JB2 828 aa14.9□□□□□ -0.02
LINC00485-201ENST00000547179 NCOA3Q9Y6Q9 1424 aa14.89□□□□□ -0.03
LINC00485-201ENST00000547179 ACEP12821 1306 aa14.88□□□□□ -0.03
LINC00485-201ENST00000547179 TNNT2P45379 298 aaPredicted RBP14.88□□□□□ -0.03
LINC00485-201ENST00000547179 GGNBP2Q9H3C7 697 aa14.88□□□□□ -0.03
LINC00485-201ENST00000547179 PRR36Q9H6K5 1346 aa14.88□□□□□ -0.03
LINC00485-201ENST00000547179 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.88□□□□□ -0.03
LINC00485-201ENST00000547179 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
LINC00485-201ENST00000547179 USP32Q8NFA0 1604 aa14.87□□□□□ -0.03
LINC00485-201ENST00000547179 CADPS2Q86UW7 1296 aa14.87□□□□□ -0.03
LINC00485-201ENST00000547179 NWD1Q149M9 1564 aa14.87□□□□□ -0.03
LINC00485-201ENST00000547179 PMFBP1Q8TBY8 1022 aa14.87□□□□□ -0.03
LINC00485-201ENST00000547179 NUDCQ9Y266 331 aa14.87□□□□□ -0.03
LINC00485-201ENST00000547179 TTC21AQ8NDW8 1320 aa14.86□□□□□ -0.03
LINC00485-201ENST00000547179 MSH6P52701 1360 aa14.86□□□□□ -0.03
LINC00485-201ENST00000547179 CDC42BPGQ6DT37 1551 aa14.86□□□□□ -0.03
LINC00485-201ENST00000547179 FYB1O15117 783 aa14.86□□□□□ -0.03
LINC00485-201ENST00000547179 ESCO1Q5FWF5 840 aa14.86□□□□□ -0.03
LINC00485-201ENST00000547179 PNISRQ8TF01 805 aaKnown RBP14.86□□□□□ -0.03
LINC00485-201ENST00000547179 CPSF1Q10570 1443 aaKnown RBP14.85□□□□□ -0.03
LINC00485-201ENST00000547179 CCDC184Q52MB2 194 aa14.85□□□□□ -0.03
LINC00485-201ENST00000547179 ITSN1Q15811 1721 aa14.85□□□□□ -0.03
LINC00485-201ENST00000547179 PSME1Q06323 249 aa14.84□□□□□ -0.03
LINC00485-201ENST00000547179 TMEM94Q12767 1356 aa14.84□□□□□ -0.03
LINC00485-201ENST00000547179 TTC21BQ7Z4L5 1316 aa14.84□□□□□ -0.03
LINC00485-201ENST00000547179 RBM33Q96EV2 1170 aaKnown RBP14.84□□□□□ -0.03
LINC00485-201ENST00000547179 PAK3O75914 559 aaPredicted RBP14.82□□□□□ -0.04
LINC00485-201ENST00000547179 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
LINC00485-201ENST00000547179 CD163L1Q9NR16 1453 aa14.82□□□□□ -0.04
LINC00485-201ENST00000547179 NEFMP07197 916 aa14.81□□□□□ -0.04
LINC00485-201ENST00000547179 MTHFSP49914 203 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms