RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PLEKHG1Q9ULL1 1385 aa10.9□□□□□ -0.66
CPSF7-224ENST00000544990 PAK3O75914 559 aaPredicted RBP10.9□□□□□ -0.66
CPSF7-224ENST00000544990 SLC26A8Q96RN1 970 aa10.9□□□□□ -0.66
CPSF7-224ENST00000544990 CLTCL1P53675 1640 aa10.9□□□□□ -0.66
CPSF7-224ENST00000544990 UBAP1LF5GYI3 381 aa10.89□□□□□ -0.67
CPSF7-224ENST00000544990 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.67
CPSF7-224ENST00000544990 NUTM2DQ5VT03 806 aaPredicted RBP10.89□□□□□ -0.67
CPSF7-224ENST00000544990 STRCP1A6NGW2 1772 aa10.89□□□□□ -0.67
CPSF7-224ENST00000544990 RAB3GAP2Q9H2M9 1393 aa10.89□□□□□ -0.67
CPSF7-224ENST00000544990 TOM1O60784 492 aa10.88□□□□□ -0.67
CPSF7-224ENST00000544990 KCNA6P17658 529 aa10.88□□□□□ -0.67
CPSF7-224ENST00000544990 HRCP23327 699 aa10.88□□□□□ -0.67
CPSF7-224ENST00000544990 CHRDL2Q6WN34 429 aa10.88□□□□□ -0.67
CPSF7-224ENST00000544990 TBX22Q9Y458 520 aa10.88□□□□□ -0.67
CPSF7-224ENST00000544990 CCDC144AA2RUR9 1427 aa10.86□□□□□ -0.67
CPSF7-224ENST00000544990 LRRC7Q96NW7 1537 aa10.86□□□□□ -0.67
CPSF7-224ENST00000544990 ZNF467Q7Z7K2 595 aaPredicted RBP10.86□□□□□ -0.67
CPSF7-224ENST00000544990 SGIP1Q9BQI5 828 aa10.86□□□□□ -0.67
CPSF7-224ENST00000544990 DIP2AQ14689 1571 aa10.86□□□□□ -0.67
CPSF7-224ENST00000544990 RPGRIP1LQ68CZ1 1315 aa10.85□□□□□ -0.67
CPSF7-224ENST00000544990 PROSER2Q86WR7 435 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-224ENST00000544990 CHD2O14647 1828 aaKnown RBP10.85□□□□□ -0.67
CPSF7-224ENST00000544990 SOCS7O14512 581 aa10.84□□□□□ -0.67
CPSF7-224ENST00000544990 STK24Q9Y6E0 443 aa10.84□□□□□ -0.67
CPSF7-224ENST00000544990 PIK3R4Q99570 1358 aa10.84□□□□□ -0.67
CPSF7-224ENST00000544990 NEXMIFQ5QGS0 1516 aa10.84□□□□□ -0.67
CPSF7-224ENST00000544990 ADAMTS13Q76LX8 1427 aa10.84□□□□□ -0.67
CPSF7-224ENST00000544990 NKTRP30414 1462 aaKnown RBP10.83□□□□□ -0.68
CPSF7-224ENST00000544990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.83□□□□□ -0.68
CPSF7-224ENST00000544990 ZFP91Q96JP5 570 aaPredicted RBP10.83□□□□□ -0.68
CPSF7-224ENST00000544990 BCL11BQ9C0K0 894 aaPredicted RBP10.83□□□□□ -0.68
CPSF7-224ENST00000544990 RYDENQ9NUL5 291 aaKnown RBP10.83□□□□□ -0.68
CPSF7-224ENST00000544990 NWD1Q149M9 1564 aa10.82□□□□□ -0.68
CPSF7-224ENST00000544990 PIP4K2BP78356 416 aa10.82□□□□□ -0.68
CPSF7-224ENST00000544990 SETBP1Q9Y6X0 1596 aa10.82□□□□□ -0.68
CPSF7-224ENST00000544990 XIRP1Q702N8 1843 aaKnown RBP10.81□□□□□ -0.68
CPSF7-224ENST00000544990 TMEM94Q12767 1356 aa10.81□□□□□ -0.68
CPSF7-224ENST00000544990 PPLO60437 1756 aa10.81□□□□□ -0.68
CPSF7-224ENST00000544990 RGL3Q3MIN7 710 aa10.81□□□□□ -0.68
CPSF7-224ENST00000544990 ILDR2Q71H61 639 aa10.81□□□□□ -0.68
CPSF7-224ENST00000544990 TSHZ2Q9NRE2 1034 aa10.81□□□□□ -0.68
CPSF7-224ENST00000544990 PIP4P2Q8N4L2 257 aa10.8□□□□□ -0.68
CPSF7-224ENST00000544990 AMOTL2Q9Y2J4 779 aa10.8□□□□□ -0.68
CPSF7-224ENST00000544990 NRXN3Q9Y4C0 1643 aa10.8□□□□□ -0.68
CPSF7-224ENST00000544990 DISP3Q9P2K9 1392 aa10.79□□□□□ -0.68
CPSF7-224ENST00000544990 MSH6P52701 1360 aa10.78□□□□□ -0.68
CPSF7-224ENST00000544990 ANKRD30BQ9BXX2 1392 aa10.78□□□□□ -0.68
CPSF7-224ENST00000544990 SPATA31E1Q6ZUB1 1445 aa10.78□□□□□ -0.68
CPSF7-224ENST00000544990 NCOA3Q9Y6Q9 1424 aa10.78□□□□□ -0.68
CPSF7-224ENST00000544990 C14orf37Q86TY3 774 aa10.78□□□□□ -0.68
CPSF7-224ENST00000544990 RBM33Q96EV2 1170 aaKnown RBP10.78□□□□□ -0.68
CPSF7-224ENST00000544990 IFT172Q9UG01 1749 aa10.76□□□□□ -0.69
CPSF7-224ENST00000544990 PDAP1Q13442 181 aaKnown RBP10.76□□□□□ -0.69
CPSF7-224ENST00000544990 KDM2AQ9Y2K7 1162 aa10.76□□□□□ -0.69
CPSF7-224ENST00000544990 CCDC61Q9Y6R9 512 aa10.76□□□□□ -0.69
CPSF7-224ENST00000544990 ALKQ9UM73 1620 aa10.76□□□□□ -0.69
CPSF7-224ENST00000544990 METP08581 1390 aa10.76□□□□□ -0.69
CPSF7-224ENST00000544990 PTPRUQ92729 1446 aa10.75□□□□□ -0.69
CPSF7-224ENST00000544990 C19orf44Q9H6X5 657 aa10.75□□□□□ -0.69
CPSF7-224ENST00000544990 ADGRF5Q8IZF2 1346 aa10.75□□□□□ -0.69
CPSF7-224ENST00000544990 HSPA1LP34931 641 aa10.74□□□□□ -0.69
CPSF7-224ENST00000544990 NKX1-1Q15270 411 aaPredicted RBP10.74□□□□□ -0.69
CPSF7-224ENST00000544990 ZNF579Q8NAF0 562 aaKnown RBP10.74□□□□□ -0.69
CPSF7-224ENST00000544990 XRN1Q8IZH2 1706 aaKnown RBP10.74□□□□□ -0.69
CPSF7-224ENST00000544990 SETD1AO15047 1707 aaKnown RBP10.73□□□□□ -0.69
CPSF7-224ENST00000544990 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
CPSF7-224ENST00000544990 ATF3P18847 181 aa10.73□□□□□ -0.69
CPSF7-224ENST00000544990 TRIM26Q12899 539 aaPredicted RBP10.73□□□□□ -0.69
CPSF7-224ENST00000544990 CADPS2Q86UW7 1296 aa10.73□□□□□ -0.69
CPSF7-224ENST00000544990 SLAIN2Q9P270 581 aa10.73□□□□□ -0.69
CPSF7-224ENST00000544990 PCDHB8Q9UN66 801 aa10.73□□□□□ -0.69
CPSF7-224ENST00000544990 PCDHB13Q9Y5F0 798 aa10.73□□□□□ -0.69
CPSF7-224ENST00000544990 FAM135BQ49AJ0 1406 aa10.73□□□□□ -0.69
CPSF7-224ENST00000544990 STAC3Q96MF2 364 aa10.72□□□□□ -0.69
CPSF7-224ENST00000544990 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.72□□□□□ -0.69
CPSF7-224ENST00000544990 MYOM2P54296 1465 aa10.7□□□□□ -0.7
CPSF7-224ENST00000544990 PIK3C2GO75747 1445 aa10.7□□□□□ -0.7
CPSF7-224ENST00000544990 DCAF11Q8TEB1 546 aa10.7□□□□□ -0.7
CPSF7-224ENST00000544990 ROBO1Q9Y6N7 1651 aa10.69□□□□□ -0.7
CPSF7-224ENST00000544990 DCCP43146 1447 aa10.69□□□□□ -0.7
CPSF7-224ENST00000544990 PTCH1Q13635 1447 aa10.69□□□□□ -0.7
CPSF7-224ENST00000544990 PSEN1P49768 467 aa10.69□□□□□ -0.7
CPSF7-224ENST00000544990 C14orf93Q9H972 538 aaKnown RBP10.69□□□□□ -0.7
CPSF7-224ENST00000544990 ZRANB1Q9UGI0 708 aa10.69□□□□□ -0.7
CPSF7-224ENST00000544990 LAMC1P11047 1609 aa10.69□□□□□ -0.7
CPSF7-224ENST00000544990 NRXN1Q9ULB1 1477 aa10.68□□□□□ -0.7
CPSF7-224ENST00000544990 PRAG1Q86YV5 1406 aa10.68□□□□□ -0.7
CPSF7-224ENST00000544990 CFAP70Q5T0N1 1121 aa10.68□□□□□ -0.7
CPSF7-224ENST00000544990 TMEM132EQ6IEE7 984 aa10.68□□□□□ -0.7
CPSF7-224ENST00000544990 STK26Q9P289 416 aa10.68□□□□□ -0.7
CPSF7-224ENST00000544990 ADGRL3Q9HAR2 1447 aa10.67□□□□□ -0.7
CPSF7-224ENST00000544990 LRPPRCP42704 1394 aaKnown RBP10.67□□□□□ -0.7
CPSF7-224ENST00000544990 DHX57Q6P158 1386 aaKnown RBP10.67□□□□□ -0.7
CPSF7-224ENST00000544990 ROBO2Q9HCK4 1378 aa10.67□□□□□ -0.7
CPSF7-224ENST00000544990 CD44P16070 742 aaKnown RBP10.67□□□□□ -0.7
CPSF7-224ENST00000544990 ABCC11Q96J66 1382 aa10.66□□□□□ -0.7
CPSF7-224ENST00000544990 KNDC1Q76NI1 1749 aa10.66□□□□□ -0.7
CPSF7-224ENST00000544990 NALCNQ8IZF0 1738 aa10.66□□□□□ -0.7
CPSF7-224ENST00000544990 YTHDC2Q9H6S0 1430 aaKnown RBP10.66□□□□□ -0.7
CPSF7-224ENST00000544990 MAP3K13O43283 966 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms