RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 MED14O60244 1454 aa26.93■■□□□ 1.9
COPS7A-218ENST00000543939 TECPR2O15040 1411 aa26.93■■□□□ 1.9
COPS7A-218ENST00000543939 NLRP13Q86W25 1043 aa26.93■■□□□ 1.9
COPS7A-218ENST00000543939 TMC1Q8TDI8 760 aa26.92■■□□□ 1.9
COPS7A-218ENST00000543939 CARD14Q9BXL6 1004 aa26.92■■□□□ 1.9
COPS7A-218ENST00000543939 MINK1Q8N4C8 1332 aaPredicted RBP26.91■■□□□ 1.9
COPS7A-218ENST00000543939 BCANQ96GW7 911 aa26.91■■□□□ 1.9
COPS7A-218ENST00000543939 CPS1P31327 1500 aa26.91■■□□□ 1.9
COPS7A-218ENST00000543939 ZNF142P52746 1687 aaPredicted RBP26.9■■□□□ 1.9
COPS7A-218ENST00000543939 SLC12A5Q9H2X9 1139 aa26.9■■□□□ 1.9
COPS7A-218ENST00000543939 SETD1BQ9UPS6 1966 aaKnown RBP26.9■■□□□ 1.9
COPS7A-218ENST00000543939 SIRT1Q96EB6 747 aa26.9■■□□□ 1.9
COPS7A-218ENST00000543939 CABP2Q9NPB3 220 aa26.9■■□□□ 1.9
COPS7A-218ENST00000543939 HNRNPUQ00839 825 aaKnown RBP eCLIP26.89■■□□□ 1.9
COPS7A-218ENST00000543939 PNISRQ8TF01 805 aaKnown RBP26.89■■□□□ 1.9
COPS7A-218ENST00000543939 PLEKHH1Q9ULM0 1364 aa26.89■■□□□ 1.89
COPS7A-218ENST00000543939 SCAF1Q9H7N4 1312 aaKnown RBP26.88■■□□□ 1.89
COPS7A-218ENST00000543939 FAM135BQ49AJ0 1406 aa26.88■■□□□ 1.89
COPS7A-218ENST00000543939 WAPLQ7Z5K2 1190 aa26.87■■□□□ 1.89
COPS7A-218ENST00000543939 NINLQ9Y2I6 1382 aa26.87■■□□□ 1.89
COPS7A-218ENST00000543939 USP32Q8NFA0 1604 aa26.86■■□□□ 1.89
COPS7A-218ENST00000543939 ATAD2Q6PL18 1390 aa26.85■■□□□ 1.89
COPS7A-218ENST00000543939 SRPK2P78362 688 aaKnown RBP26.85■■□□□ 1.89
COPS7A-218ENST00000543939 DIP2AQ14689 1571 aa26.84■■□□□ 1.89
COPS7A-218ENST00000543939 ANKRD36BQ8N2N9 1353 aa26.83■■□□□ 1.89
COPS7A-218ENST00000543939 NSD3Q9BZ95 1437 aa26.83■■□□□ 1.89
COPS7A-218ENST00000543939 CDK19Q9BWU1 502 aa26.82■■□□□ 1.88
COPS7A-218ENST00000543939 TBX22Q9Y458 520 aa26.81■■□□□ 1.88
COPS7A-218ENST00000543939 GTF3C3Q9Y5Q9 886 aa26.8■■□□□ 1.88
COPS7A-218ENST00000543939 PPP2R1AP30153 589 aa26.79■■□□□ 1.88
COPS7A-218ENST00000543939 SLC26A8Q96RN1 970 aa26.79■■□□□ 1.88
COPS7A-218ENST00000543939 PTPRUQ92729 1446 aa26.78■■□□□ 1.88
COPS7A-218ENST00000543939 ROBO2Q9HCK4 1378 aa26.78■■□□□ 1.88
COPS7A-218ENST00000543939 CD163L1Q9NR16 1453 aa26.74■■□□□ 1.87
COPS7A-218ENST00000543939 A0A1W2PP64 1363 aa26.74■■□□□ 1.87
COPS7A-218ENST00000543939 ZBED9Q6R2W3 1325 aa26.73■■□□□ 1.87
COPS7A-218ENST00000543939 WASLO00401 505 aaPredicted RBP26.73■■□□□ 1.87
COPS7A-218ENST00000543939 ADGRB2O60241 1585 aa26.72■■□□□ 1.87
COPS7A-218ENST00000543939 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.72■■□□□ 1.87
COPS7A-218ENST00000543939 CGNL1Q0VF96 1302 aa26.71■■□□□ 1.87
COPS7A-218ENST00000543939 TERF2IPQ9NYB0 399 aa26.7■■□□□ 1.87
COPS7A-218ENST00000543939 XRN1Q8IZH2 1706 aaKnown RBP26.7■■□□□ 1.87
COPS7A-218ENST00000543939 PTCH1Q13635 1447 aa26.69■■□□□ 1.86
COPS7A-218ENST00000543939 ANKLE2Q86XL3 938 aa26.69■■□□□ 1.86
COPS7A-218ENST00000543939 NSD2O96028 1365 aa26.69■■□□□ 1.86
COPS7A-218ENST00000543939 AMOTL2Q9Y2J4 779 aa26.68■■□□□ 1.86
COPS7A-218ENST00000543939 INSRP06213 1382 aa26.68■■□□□ 1.86
COPS7A-218ENST00000543939 CABP1Q9NZU7 370 aa26.68■■□□□ 1.86
COPS7A-218ENST00000543939 PIK3R4Q99570 1358 aa26.67■■□□□ 1.86
COPS7A-218ENST00000543939 ATP7BP35670 1465 aa26.67■■□□□ 1.86
COPS7A-218ENST00000543939 HDGFL2Q7Z4V5 671 aaPredicted RBP26.65■■□□□ 1.86
COPS7A-218ENST00000543939 MORC1Q86VD1 984 aa26.65■■□□□ 1.86
COPS7A-218ENST00000543939 ANKRD26Q9UPS8 1709 aa26.64■■□□□ 1.85
COPS7A-218ENST00000543939 PPIP5K1Q6PFW1 1433 aa26.61■■□□□ 1.85
COPS7A-218ENST00000543939 CHD2O14647 1828 aaKnown RBP26.61■■□□□ 1.85
COPS7A-218ENST00000543939 NUDT16Q96DE0 195 aaKnown RBP26.61■■□□□ 1.85
COPS7A-218ENST00000543939 BLMP54132 1417 aaPredicted RBP26.61■■□□□ 1.85
COPS7A-218ENST00000543939 KIF20BQ96Q89 1820 aa26.6■■□□□ 1.85
COPS7A-218ENST00000543939 CPSF1Q10570 1443 aaKnown RBP26.59■■□□□ 1.85
COPS7A-218ENST00000543939 CDC42BPGQ6DT37 1551 aa26.58■■□□□ 1.85
COPS7A-218ENST00000543939 CCDC61Q9Y6R9 512 aa26.58■■□□□ 1.85
COPS7A-218ENST00000543939 TOPAZ1Q8N9V7 1692 aa26.58■■□□□ 1.85
COPS7A-218ENST00000543939 AKAP12Q02952 1782 aa26.57■■□□□ 1.84
COPS7A-218ENST00000543939 PRR36Q9H6K5 1346 aa26.57■■□□□ 1.84
COPS7A-218ENST00000543939 POLR3AO14802 1390 aaPredicted RBP26.57■■□□□ 1.84
COPS7A-218ENST00000543939 ITSN1Q15811 1721 aa26.56■■□□□ 1.84
COPS7A-218ENST00000543939 MON2Q7Z3U7 1717 aa26.56■■□□□ 1.84
COPS7A-218ENST00000543939 NPHP4O75161 1426 aaPredicted RBP26.55■■□□□ 1.84
COPS7A-218ENST00000543939 FYB1O15117 783 aa26.55■■□□□ 1.84
COPS7A-218ENST00000543939 KCNA6P17658 529 aa26.54■■□□□ 1.84
COPS7A-218ENST00000543939 ADAMTS8Q9UP79 889 aa26.54■■□□□ 1.84
COPS7A-218ENST00000543939 WDR43Q15061 677 aaKnown RBP eCLIP26.53■■□□□ 1.84
COPS7A-218ENST00000543939 NCKAP5LQ9HCH0 1330 aa26.52■■□□□ 1.84
COPS7A-218ENST00000543939 TNNT2P45379 298 aaPredicted RBP26.52■■□□□ 1.84
COPS7A-218ENST00000543939 EDC4Q6P2E9 1401 aaKnown RBP26.51■■□□□ 1.83
COPS7A-218ENST00000543939 GGNBP2Q9H3C7 697 aa26.51■■□□□ 1.83
COPS7A-218ENST00000543939 SHPRHQ149N8 1683 aa26.49■■□□□ 1.83
COPS7A-218ENST00000543939 SENP3-EIF4A1A0A087X0R7 540 aa26.47■■□□□ 1.83
COPS7A-218ENST00000543939 MTHFSP49914 203 aa26.47■■□□□ 1.83
COPS7A-218ENST00000543939 PLEKHG3A1L390 1219 aa26.46■■□□□ 1.83
COPS7A-218ENST00000543939 ZNF692Q9BU19 519 aaPredicted RBP26.45■■□□□ 1.83
COPS7A-218ENST00000543939 SMG6Q86US8 1419 aaKnown RBP26.45■■□□□ 1.83
COPS7A-218ENST00000543939 RGPD8O14715 1765 aaPredicted RBP26.45■■□□□ 1.82
COPS7A-218ENST00000543939 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.44■■□□□ 1.82
COPS7A-218ENST00000543939 NKTRP30414 1462 aaKnown RBP26.44■■□□□ 1.82
COPS7A-218ENST00000543939 FMN2Q9NZ56 1722 aa26.44■■□□□ 1.82
COPS7A-218ENST00000543939 NALCNQ8IZF0 1738 aa26.43■■□□□ 1.82
COPS7A-218ENST00000543939 NRKQ7Z2Y5 1582 aa26.43■■□□□ 1.82
COPS7A-218ENST00000543939 NWD1Q149M9 1564 aa26.41■■□□□ 1.82
COPS7A-218ENST00000543939 NUTM2FA1L443 756 aa26.41■■□□□ 1.82
COPS7A-218ENST00000543939 CFAP53Q96M91 514 aa26.41■■□□□ 1.82
COPS7A-218ENST00000543939 ANKARQ7Z5J8 1434 aa26.41■■□□□ 1.82
COPS7A-218ENST00000543939 ACEP12821 1306 aa26.39■■□□□ 1.82
COPS7A-218ENST00000543939 NUDCQ9Y266 331 aa26.39■■□□□ 1.81
COPS7A-218ENST00000543939 KDM4FA0A1W2PPD8 638 aa26.37■■□□□ 1.81
COPS7A-218ENST00000543939 PDE3BQ13370 1112 aa26.36■■□□□ 1.81
COPS7A-218ENST00000543939 NME9Q86XW9 330 aa26.36■■□□□ 1.81
COPS7A-218ENST00000543939 SALL2Q9Y467 1007 aaPredicted RBP26.36■■□□□ 1.81
COPS7A-218ENST00000543939 COL3A1P02461 1466 aaPredicted RBP26.36■■□□□ 1.81
COPS7A-218ENST00000543939 USP6P35125 1406 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms