RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 COL22A1Q8NFW1 1626 aaPredicted RBP13.81□□□□□ -0.2
CD4-211ENST00000543755 CAMTA1Q9Y6Y1 1673 aa13.79□□□□□ -0.2
CD4-211ENST00000543755 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.79□□□□□ -0.2
CD4-211ENST00000543755 SPON1Q9HCB6 807 aa13.79□□□□□ -0.2
CD4-211ENST00000543755 FAM182BQ5T319 152 aa13.78□□□□□ -0.2
CD4-211ENST00000543755 SLIT2O94813 1529 aa13.78□□□□□ -0.2
CD4-211ENST00000543755 LAMC1P11047 1609 aa13.78□□□□□ -0.2
CD4-211ENST00000543755 GIGYF1O75420 1035 aaPredicted RBP13.77□□□□□ -0.21
CD4-211ENST00000543755 XPCQ01831 940 aaPredicted RBP13.77□□□□□ -0.21
CD4-211ENST00000543755 NPHP3Q7Z494 1330 aa13.77□□□□□ -0.21
CD4-211ENST00000543755 XRN1Q8IZH2 1706 aaKnown RBP13.77□□□□□ -0.21
CD4-211ENST00000543755 ANKRD30AQ9BXX3 1397 aa13.77□□□□□ -0.21
CD4-211ENST00000543755 MARF1Q9Y4F3 1742 aaKnown RBP13.76□□□□□ -0.21
CD4-211ENST00000543755 CEP350Q5VT06 3117 aa13.76□□□□□ -0.21
CD4-211ENST00000543755 VPS72Q15906 364 aa13.76□□□□□ -0.21
CD4-211ENST00000543755 KCNQ2O43526 872 aa13.75□□□□□ -0.21
CD4-211ENST00000543755 ABCC5O15440 1437 aa13.74□□□□□ -0.21
CD4-211ENST00000543755 RGPD1P0DJD0 1748 aa13.74□□□□□ -0.21
CD4-211ENST00000543755 ONECUT3O60422 494 aaPredicted RBP13.74□□□□□ -0.21
CD4-211ENST00000543755 HAP1P54257 671 aaPredicted RBP13.74□□□□□ -0.21
CD4-211ENST00000543755 NALCNQ8IZF0 1738 aa13.73□□□□□ -0.21
CD4-211ENST00000543755 PLEKHG5O94827 1062 aa13.73□□□□□ -0.21
CD4-211ENST00000543755 FAM98CQ17RN3 349 aaKnown RBP13.73□□□□□ -0.21
CD4-211ENST00000543755 CHIC2Q9UKJ5 165 aa13.73□□□□□ -0.21
CD4-211ENST00000543755 DISP2A7MBM2 1401 aa13.73□□□□□ -0.21
CD4-211ENST00000543755 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
CD4-211ENST00000543755 NBPF8Q3BBV2 869 aa13.72□□□□□ -0.21
CD4-211ENST00000543755 ESCO1Q5FWF5 840 aa13.72□□□□□ -0.21
CD4-211ENST00000543755 NBPF14Q5TI25 921 aa13.72□□□□□ -0.21
CD4-211ENST00000543755 CAMKK2Q96RR4 588 aa13.72□□□□□ -0.21
CD4-211ENST00000543755 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.21
CD4-211ENST00000543755 METP08581 1390 aa13.71□□□□□ -0.22
CD4-211ENST00000543755 APBA3O96018 575 aa13.7□□□□□ -0.22
CD4-211ENST00000543755 DAPK1P53355 1430 aa13.7□□□□□ -0.22
CD4-211ENST00000543755 TRIM37O94972 964 aa13.69□□□□□ -0.22
CD4-211ENST00000543755 ADGRB2O60241 1585 aa13.68□□□□□ -0.22
CD4-211ENST00000543755 FOXO3O43524 673 aa13.68□□□□□ -0.22
CD4-211ENST00000543755 ZNF326Q5BKZ1 582 aaKnown RBP13.68□□□□□ -0.22
CD4-211ENST00000543755 PTPN23Q9H3S7 1636 aa13.68□□□□□ -0.22
CD4-211ENST00000543755 PXDNQ92626 1479 aa13.67□□□□□ -0.22
CD4-211ENST00000543755 CAPN15O75808 1086 aa13.66□□□□□ -0.22
CD4-211ENST00000543755 TNS1Q9HBL0 1735 aaKnown RBP13.66□□□□□ -0.22
CD4-211ENST00000543755 ADGRL2O95490 1459 aa13.66□□□□□ -0.22
CD4-211ENST00000543755 USP32Q8NFA0 1604 aa13.65□□□□□ -0.22
CD4-211ENST00000543755 NRXN3Q9Y4C0 1643 aa13.65□□□□□ -0.22
CD4-211ENST00000543755 PARD3Q8TEW0 1356 aa13.65□□□□□ -0.22
CD4-211ENST00000543755 UTRNP46939 3433 aa13.64□□□□□ -0.23
CD4-211ENST00000543755 CABLES1Q8TDN4 633 aa13.63□□□□□ -0.23
CD4-211ENST00000543755 ANKRD50Q9ULJ7 1429 aa13.63□□□□□ -0.23
CD4-211ENST00000543755 PLCH1Q4KWH8 1693 aa13.61□□□□□ -0.23
CD4-211ENST00000543755 NRKQ7Z2Y5 1582 aa13.61□□□□□ -0.23
CD4-211ENST00000543755 SPATA31A3Q5VYP0 1347 aa13.61□□□□□ -0.23
CD4-211ENST00000543755 IQGAP3Q86VI3 1631 aa13.61□□□□□ -0.23
CD4-211ENST00000543755 NUTM2FA1L443 756 aa13.6□□□□□ -0.23
CD4-211ENST00000543755 KANK4Q5T7N3 995 aaPredicted RBP13.6□□□□□ -0.23
CD4-211ENST00000543755 ROBO2Q9HCK4 1378 aa13.59□□□□□ -0.23
CD4-211ENST00000543755 NWD2Q9ULI1 1742 aa13.59□□□□□ -0.23
CD4-211ENST00000543755 HFM1A2PYH4 1435 aa13.59□□□□□ -0.23
CD4-211ENST00000543755 FAM196AQ6ZSG2 479 aa13.59□□□□□ -0.23
CD4-211ENST00000543755 NUP188Q5SRE5 1749 aa13.59□□□□□ -0.23
CD4-211ENST00000543755 ZBTB7AO95365 584 aa13.58□□□□□ -0.24
CD4-211ENST00000543755 FHDC1Q9C0D6 1143 aaPredicted RBP13.58□□□□□ -0.24
CD4-211ENST00000543755 CCDC144AA2RUR9 1427 aa13.57□□□□□ -0.24
CD4-211ENST00000543755 E9PCH4 1651 aa13.57□□□□□ -0.24
CD4-211ENST00000543755 FAM83GA6ND36 823 aa13.57□□□□□ -0.24
CD4-211ENST00000543755 LMOD2Q6P5Q4 547 aa13.57□□□□□ -0.24
CD4-211ENST00000543755 SYT17Q9BSW7 474 aa13.57□□□□□ -0.24
CD4-211ENST00000543755 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
CD4-211ENST00000543755 RREB1Q92766 1687 aa13.56□□□□□ -0.24
CD4-211ENST00000543755 PSME1Q06323 249 aa13.56□□□□□ -0.24
CD4-211ENST00000543755 KRT28Q7Z3Y7 464 aa13.56□□□□□ -0.24
CD4-211ENST00000543755 ATF5Q9Y2D1 282 aaPredicted RBP13.55□□□□□ -0.24
CD4-211ENST00000543755 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
CD4-211ENST00000543755 MYOM1P52179 1685 aa13.54□□□□□ -0.24
CD4-211ENST00000543755 CHD4Q14839 1912 aa13.53□□□□□ -0.24
CD4-211ENST00000543755 GPR162Q16538 588 aa13.53□□□□□ -0.24
CD4-211ENST00000543755 VGFO15240 615 aaPredicted RBP13.52□□□□□ -0.25
CD4-211ENST00000543755 SLC34A2O95436 690 aa13.52□□□□□ -0.25
CD4-211ENST00000543755 HSPA6P17066 643 aa13.52□□□□□ -0.25
CD4-211ENST00000543755 PDGFDQ9GZP0 370 aaPredicted RBP13.52□□□□□ -0.25
CD4-211ENST00000543755 SPATA31A5Q5VU36 1347 aa13.52□□□□□ -0.25
CD4-211ENST00000543755 SPATA31A7Q8IWB4 1347 aa13.52□□□□□ -0.25
CD4-211ENST00000543755 VPS8Q8N3P4 1428 aa13.52□□□□□ -0.25
CD4-211ENST00000543755 TNS3Q68CZ2 1445 aa13.51□□□□□ -0.25
CD4-211ENST00000543755 ARHGEF10O15013 1369 aa13.51□□□□□ -0.25
CD4-211ENST00000543755 PTGER2P43116 358 aa13.51□□□□□ -0.25
CD4-211ENST00000543755 APLP2Q06481 763 aa13.51□□□□□ -0.25
CD4-211ENST00000543755 PRAG1Q86YV5 1406 aa13.5□□□□□ -0.25
CD4-211ENST00000543755 PELP1Q8IZL8 1130 aaKnown RBP13.5□□□□□ -0.25
CD4-211ENST00000543755 THSD7AQ9UPZ6 1657 aa13.5□□□□□ -0.25
CD4-211ENST00000543755 ANO8Q9HCE9 1232 aaPredicted RBP13.49□□□□□ -0.25
CD4-211ENST00000543755 DLC1Q96QB1 1528 aa13.49□□□□□ -0.25
CD4-211ENST00000543755 NAIPQ13075 1403 aa13.48□□□□□ -0.25
CD4-211ENST00000543755 NUP155O75694 1391 aa13.48□□□□□ -0.25
CD4-211ENST00000543755 NRAPQ86VF7 1730 aa13.48□□□□□ -0.25
CD4-211ENST00000543755 KIF1AQ12756 1690 aa13.48□□□□□ -0.25
CD4-211ENST00000543755 PDE3BQ13370 1112 aa13.48□□□□□ -0.25
CD4-211ENST00000543755 FAM50AQ14320 339 aaKnown RBP13.48□□□□□ -0.25
CD4-211ENST00000543755 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
CD4-211ENST00000543755 BCL11BQ9C0K0 894 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms