RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 EFCAB2Q5VUJ9 269 aa13.29□□□□□ -0.28
CLPB-211ENST00000542555 ATP10AO60312 1499 aa13.29□□□□□ -0.28
CLPB-211ENST00000542555 TTC37Q6PGP7 1564 aa13.28□□□□□ -0.28
CLPB-211ENST00000542555 ATP1B4Q9UN42 357 aaPredicted RBP13.28□□□□□ -0.28
CLPB-211ENST00000542555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLPB-211ENST00000542555 PREX1Q8TCU6 1659 aa13.28□□□□□ -0.28
CLPB-211ENST00000542555 CEBPAP49715 358 aaPredicted RBP13.27□□□□□ -0.29
CLPB-211ENST00000542555 CDK11AQ9UQ88 783 aaPredicted RBP13.27□□□□□ -0.29
CLPB-211ENST00000542555 C9orf84Q5VXU9 1444 aa13.27□□□□□ -0.29
CLPB-211ENST00000542555 HECW1Q76N89 1606 aa13.27□□□□□ -0.29
CLPB-211ENST00000542555 FAM98CQ17RN3 349 aaKnown RBP13.26□□□□□ -0.29
CLPB-211ENST00000542555 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.26□□□□□ -0.29
CLPB-211ENST00000542555 TRIM6-TRIM34B2RNG4 842 aa13.25□□□□□ -0.29
CLPB-211ENST00000542555 RBM33Q96EV2 1170 aaKnown RBP13.25□□□□□ -0.29
CLPB-211ENST00000542555 LRCH3Q96II8 777 aa13.25□□□□□ -0.29
CLPB-211ENST00000542555 PLCH2O75038 1416 aa13.24□□□□□ -0.29
CLPB-211ENST00000542555 TSR3Q9UJK0 312 aaKnown RBP13.24□□□□□ -0.29
CLPB-211ENST00000542555 SPATA31D1Q6ZQQ2 1576 aa13.24□□□□□ -0.29
CLPB-211ENST00000542555 ARHGEF12Q9NZN5 1544 aa13.23□□□□□ -0.29
CLPB-211ENST00000542555 DPYSL4O14531 572 aa13.23□□□□□ -0.29
CLPB-211ENST00000542555 CADPS2Q86UW7 1296 aa13.23□□□□□ -0.29
CLPB-211ENST00000542555 HPS5Q9UPZ3 1129 aa13.22□□□□□ -0.29
CLPB-211ENST00000542555 PTPRTO14522 1441 aa13.22□□□□□ -0.29
CLPB-211ENST00000542555 DDX12PQ92771 950 aa13.2□□□□□ -0.3
CLPB-211ENST00000542555 EEA1Q15075 1411 aa13.2□□□□□ -0.3
CLPB-211ENST00000542555 ZNF518AQ6AHZ1 1483 aa13.19□□□□□ -0.3
CLPB-211ENST00000542555 PACS2Q86VP3 889 aa13.19□□□□□ -0.3
CLPB-211ENST00000542555 CAMK2BQ13554 666 aa13.18□□□□□ -0.3
CLPB-211ENST00000542555 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
CLPB-211ENST00000542555 IQSEC2Q5JU85 1478 aa13.17□□□□□ -0.3
CLPB-211ENST00000542555 SIGLEC1Q9BZZ2 1709 aa13.17□□□□□ -0.3
CLPB-211ENST00000542555 SETD1BQ9UPS6 1966 aaKnown RBP13.17□□□□□ -0.3
CLPB-211ENST00000542555 CLIP1P30622 1438 aa13.16□□□□□ -0.3
CLPB-211ENST00000542555 PPP4CP60510 307 aa13.16□□□□□ -0.3
CLPB-211ENST00000542555 AFAP1Q8N556 730 aa13.16□□□□□ -0.3
CLPB-211ENST00000542555 CDK13Q14004 1512 aaKnown RBP13.16□□□□□ -0.3
CLPB-211ENST00000542555 MYO5CQ9NQX4 1742 aa13.16□□□□□ -0.3
CLPB-211ENST00000542555 TRAPPC8Q9Y2L5 1435 aa13.15□□□□□ -0.3
CLPB-211ENST00000542555 STRCQ7RTU9 1775 aa13.15□□□□□ -0.3
CLPB-211ENST00000542555 ARHGAP5Q13017 1502 aa13.15□□□□□ -0.3
CLPB-211ENST00000542555 UBAP1LF5GYI3 381 aa13.15□□□□□ -0.3
CLPB-211ENST00000542555 MAP3K7O43318 606 aa13.14□□□□□ -0.31
CLPB-211ENST00000542555 FMN1Q68DA7 1419 aa13.13□□□□□ -0.31
CLPB-211ENST00000542555 NBR1Q14596 966 aa13.13□□□□□ -0.31
CLPB-211ENST00000542555 CNTLNQ9NXG0 1405 aa13.13□□□□□ -0.31
CLPB-211ENST00000542555 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
CLPB-211ENST00000542555 KIF14Q15058 1648 aa13.12□□□□□ -0.31
CLPB-211ENST00000542555 GFRA3O60609 400 aa13.09□□□□□ -0.31
CLPB-211ENST00000542555 EN1Q05925 392 aaPredicted RBP13.09□□□□□ -0.31
CLPB-211ENST00000542555 REREQ9P2R6 1566 aa13.09□□□□□ -0.31
CLPB-211ENST00000542555 C3P01024 1663 aa13.08□□□□□ -0.31
CLPB-211ENST00000542555 KDM5CP41229 1560 aa13.08□□□□□ -0.32
CLPB-211ENST00000542555 TROQ12816 1431 aaPredicted RBP13.08□□□□□ -0.32
CLPB-211ENST00000542555 NCOA1Q15788 1441 aa13.08□□□□□ -0.32
CLPB-211ENST00000542555 TSR1Q2NL82 804 aaKnown RBP13.08□□□□□ -0.32
CLPB-211ENST00000542555 TSKSQ9UJT2 592 aa13.08□□□□□ -0.32
CLPB-211ENST00000542555 LTBP4Q8N2S1 1624 aa13.08□□□□□ -0.32
CLPB-211ENST00000542555 MLH3Q9UHC1 1453 aa13.08□□□□□ -0.32
CLPB-211ENST00000542555 AGLP35573 1532 aa13.08□□□□□ -0.32
CLPB-211ENST00000542555 DIP2CQ9Y2E4 1556 aa13.07□□□□□ -0.32
CLPB-211ENST00000542555 NPATQ14207 1427 aa13.05□□□□□ -0.32
CLPB-211ENST00000542555 CAMSAP1Q5T5Y3 1602 aa13.05□□□□□ -0.32
CLPB-211ENST00000542555 TRAF7Q6Q0C0 670 aa13.04□□□□□ -0.32
CLPB-211ENST00000542555 SAMD7Q7Z3H4 446 aa13.04□□□□□ -0.32
CLPB-211ENST00000542555 CDCA7LQ96GN5 454 aa13.04□□□□□ -0.32
CLPB-211ENST00000542555 ZNF335Q9H4Z2 1342 aaPredicted RBP13.04□□□□□ -0.32
CLPB-211ENST00000542555 TOM1O60784 492 aa13.03□□□□□ -0.32
CLPB-211ENST00000542555 PRKD2Q9BZL6 878 aa13.03□□□□□ -0.32
CLPB-211ENST00000542555 ZMYM3Q14202 1370 aa13.03□□□□□ -0.32
CLPB-211ENST00000542555 ABCA6Q8N139 1617 aa13.02□□□□□ -0.32
CLPB-211ENST00000542555 SMAPO00193 183 aa13.02□□□□□ -0.33
CLPB-211ENST00000542555 HDGFP51858 240 aaKnown RBP13.02□□□□□ -0.33
CLPB-211ENST00000542555 ZNF777Q9ULD5 760 aaPredicted RBP13.02□□□□□ -0.33
CLPB-211ENST00000542555 SPDYE16A6NNV3 312 aaPredicted RBP13.01□□□□□ -0.33
CLPB-211ENST00000542555 PRSS12P56730 875 aa13.01□□□□□ -0.33
CLPB-211ENST00000542555 PDIA6Q15084 440 aa13.01□□□□□ -0.33
CLPB-211ENST00000542555 TJAP1Q5JTD0 557 aa13.01□□□□□ -0.33
CLPB-211ENST00000542555 SPAG9O60271 1321 aaKnown RBP13.01□□□□□ -0.33
CLPB-211ENST00000542555 PIP4K2BP78356 416 aa13□□□□□ -0.33
CLPB-211ENST00000542555 IL21Q9HBE4 155 aa13□□□□□ -0.33
CLPB-211ENST00000542555 NBPF26B4DH59 902 aa12.99□□□□□ -0.33
CLPB-211ENST00000542555 MTRQ99707 1265 aa12.99□□□□□ -0.33
CLPB-211ENST00000542555 MROH2AA6NES4 1674 aa12.99□□□□□ -0.33
CLPB-211ENST00000542555 RNF40O75150 1001 aa12.98□□□□□ -0.33
CLPB-211ENST00000542555 GGT6Q6P531 493 aa12.98□□□□□ -0.33
CLPB-211ENST00000542555 ABCC1P33527 1531 aa12.98□□□□□ -0.33
CLPB-211ENST00000542555 PLA2R1Q13018 1463 aa12.97□□□□□ -0.33
CLPB-211ENST00000542555 PNMA3Q9UL41 463 aa12.97□□□□□ -0.33
CLPB-211ENST00000542555 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
CLPB-211ENST00000542555 PREX2Q70Z35 1606 aa12.96□□□□□ -0.33
CLPB-211ENST00000542555 NRG2O14511 850 aaPredicted RBP12.96□□□□□ -0.33
CLPB-211ENST00000542555 PPP1R18Q6NYC8 613 aa12.96□□□□□ -0.33
CLPB-211ENST00000542555 TATDN2Q93075 761 aa12.96□□□□□ -0.33
CLPB-211ENST00000542555 ARHGAP35Q9NRY4 1499 aa12.96□□□□□ -0.34
CLPB-211ENST00000542555 SUPT6HQ7KZ85 1726 aaKnown RBP12.96□□□□□ -0.34
CLPB-211ENST00000542555 CDC42BPBQ9Y5S2 1711 aa12.96□□□□□ -0.34
CLPB-211ENST00000542555 ITSN2Q9NZM3 1697 aa12.96□□□□□ -0.34
CLPB-211ENST00000542555 HSPA1LP34931 641 aa12.95□□□□□ -0.34
CLPB-211ENST00000542555 GRXCR2A6NFK2 248 aa12.94□□□□□ -0.34
CLPB-211ENST00000542555 V9GY48 417 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms