RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 DIP2CQ9Y2E4 1556 aa26.2■■□□□ 1.79
TMEM260-203ENST00000539559 MYOM1P52179 1685 aa26.2■■□□□ 1.79
TMEM260-203ENST00000539559 PRKCSHP14314 528 aaPredicted RBP26.2■■□□□ 1.78
TMEM260-203ENST00000539559 TNNQ9UQP3 1299 aa26.18■■□□□ 1.78
TMEM260-203ENST00000539559 SLKQ9H2G2 1235 aaPredicted RBP26.16■■□□□ 1.78
TMEM260-203ENST00000539559 CENPJQ9HC77 1338 aaPredicted RBP26.16■■□□□ 1.78
TMEM260-203ENST00000539559 UGGT1Q9NYU2 1555 aa26.16■■□□□ 1.78
TMEM260-203ENST00000539559 BCL2L13Q9BXK5 485 aa26.15■■□□□ 1.78
TMEM260-203ENST00000539559 NPATQ14207 1427 aa26.15■■□□□ 1.78
TMEM260-203ENST00000539559 CLUAP1Q96AJ1 413 aa26.14■■□□□ 1.78
TMEM260-203ENST00000539559 ABCC3O15438 1527 aa26.14■■□□□ 1.77
TMEM260-203ENST00000539559 WWC1Q8IX03 1113 aa26.13■■□□□ 1.77
TMEM260-203ENST00000539559 YEATS2Q9ULM3 1422 aa26.13■■□□□ 1.77
TMEM260-203ENST00000539559 ADGRF5Q8IZF2 1346 aa26.12■■□□□ 1.77
TMEM260-203ENST00000539559 KIF1BO60333 1816 aa26.12■■□□□ 1.77
TMEM260-203ENST00000539559 POGKQ9P215 609 aa26.1■■□□□ 1.77
TMEM260-203ENST00000539559 CGNL1Q0VF96 1302 aa26.1■■□□□ 1.77
TMEM260-203ENST00000539559 NPC1L1Q9UHC9 1359 aa26.09■■□□□ 1.77
TMEM260-203ENST00000539559 RLBP1P12271 317 aa26.08■■□□□ 1.77
TMEM260-203ENST00000539559 ERVK-7P63135 1459 aa26.08■■□□□ 1.77
TMEM260-203ENST00000539559 KDM5AP29375 1690 aaKnown RBP26.08■■□□□ 1.77
TMEM260-203ENST00000539559 PDE3AQ14432 1141 aa26.08■■□□□ 1.76
TMEM260-203ENST00000539559 MYOM2P54296 1465 aa26.07■■□□□ 1.76
TMEM260-203ENST00000539559 PCDHB15Q9Y5E8 787 aa26.07■■□□□ 1.76
TMEM260-203ENST00000539559 TSPOAP1O95153 1857 aa26.07■■□□□ 1.76
TMEM260-203ENST00000539559 CAMSAP1Q5T5Y3 1602 aa26.05■■□□□ 1.76
TMEM260-203ENST00000539559 CHGAP10645 457 aaKnown RBP26.03■■□□□ 1.76
TMEM260-203ENST00000539559 ADGRB3O60242 1522 aa26.03■■□□□ 1.76
TMEM260-203ENST00000539559 SPRYD3Q8NCJ5 442 aa26.02■■□□□ 1.76
TMEM260-203ENST00000539559 ARXQ96QS3 562 aa26.02■■□□□ 1.76
TMEM260-203ENST00000539559 RARSP54136 660 aaKnown RBP26.02■■□□□ 1.76
TMEM260-203ENST00000539559 KIAA1210Q9ULL0 1709 aa26.01■■□□□ 1.75
TMEM260-203ENST00000539559 MROH2AA6NES4 1674 aa26.01■■□□□ 1.75
TMEM260-203ENST00000539559 CFAP65Q6ZU64 1925 aaKnown RBP26.01■■□□□ 1.75
TMEM260-203ENST00000539559 MORC1Q86VD1 984 aa26.01■■□□□ 1.75
TMEM260-203ENST00000539559 TCP11L2Q8N4U5 519 aa26.01■■□□□ 1.75
TMEM260-203ENST00000539559 SLC12A5Q9H2X9 1139 aa26.01■■□□□ 1.75
TMEM260-203ENST00000539559 MAPK8IP3Q9UPT6 1336 aa26.01■■□□□ 1.75
TMEM260-203ENST00000539559 ZC3H13Q5T200 1668 aaKnown RBP26.01■■□□□ 1.75
TMEM260-203ENST00000539559 NOS1P29475 1434 aa26.01■■□□□ 1.75
TMEM260-203ENST00000539559 ARHGAP31Q2M1Z3 1444 aa26.01■■□□□ 1.75
TMEM260-203ENST00000539559 TRAK1Q9UPV9 953 aa25.99■■□□□ 1.75
TMEM260-203ENST00000539559 VIRMAQ69YN4 1812 aaKnown RBP25.99■■□□□ 1.75
TMEM260-203ENST00000539559 PDZRN3Q9UPQ7 1066 aa25.99■■□□□ 1.75
TMEM260-203ENST00000539559 IFT172Q9UG01 1749 aa25.99■■□□□ 1.75
TMEM260-203ENST00000539559 NLRP1Q9C000 1473 aa25.97■■□□□ 1.75
TMEM260-203ENST00000539559 EIF5BO60841 1220 aaKnown RBP25.97■■□□□ 1.75
TMEM260-203ENST00000539559 NSD3Q9BZ95 1437 aa25.97■■□□□ 1.75
TMEM260-203ENST00000539559 BECN1Q14457 450 aa25.97■■□□□ 1.75
TMEM260-203ENST00000539559 NRXN1Q9ULB1 1477 aa25.96■■□□□ 1.75
TMEM260-203ENST00000539559 POLR3AO14802 1390 aaPredicted RBP25.95■■□□□ 1.75
TMEM260-203ENST00000539559 RPGRIP1LQ68CZ1 1315 aa25.95■■□□□ 1.74
TMEM260-203ENST00000539559 RUNDC1Q96C34 613 aa25.94■■□□□ 1.74
TMEM260-203ENST00000539559 SIGLEC1Q9BZZ2 1709 aa25.94■■□□□ 1.74
TMEM260-203ENST00000539559 MTHFSP49914 203 aa25.92■■□□□ 1.74
TMEM260-203ENST00000539559 TMEM132EQ6IEE7 984 aa25.92■■□□□ 1.74
TMEM260-203ENST00000539559 TBC1D2Q9BYX2 928 aa25.92■■□□□ 1.74
TMEM260-203ENST00000539559 PMFBP1Q8TBY8 1022 aa25.91■■□□□ 1.74
TMEM260-203ENST00000539559 REREQ9P2R6 1566 aa25.91■■□□□ 1.74
TMEM260-203ENST00000539559 ANTXR1Q9H6X2 564 aa25.91■■□□□ 1.74
TMEM260-203ENST00000539559 PIK3C2BO00750 1634 aa25.9■■□□□ 1.74
TMEM260-203ENST00000539559 SENP3Q9H4L4 574 aaPredicted RBP25.9■■□□□ 1.74
TMEM260-203ENST00000539559 KIF13AQ9H1H9 1805 aa25.9■■□□□ 1.74
TMEM260-203ENST00000539559 NGEFQ8N5V2 710 aa25.89■■□□□ 1.74
TMEM260-203ENST00000539559 TBC1D32Q96NH3 1257 aa25.89■■□□□ 1.74
TMEM260-203ENST00000539559 SLC52A1Q9NWF4 448 aa25.89■■□□□ 1.74
TMEM260-203ENST00000539559 NINLQ9Y2I6 1382 aa25.89■■□□□ 1.73
TMEM260-203ENST00000539559 PPLO60437 1756 aa25.88■■□□□ 1.73
TMEM260-203ENST00000539559 SHPRHQ149N8 1683 aa25.88■■□□□ 1.73
TMEM260-203ENST00000539559 SLC24A1O60721 1099 aa25.88■■□□□ 1.73
TMEM260-203ENST00000539559 UPF2Q9HAU5 1272 aaKnown RBP25.88■■□□□ 1.73
TMEM260-203ENST00000539559 AGLP35573 1532 aa25.87■■□□□ 1.73
TMEM260-203ENST00000539559 PPP6R1Q9UPN7 881 aa25.87■■□□□ 1.73
TMEM260-203ENST00000539559 TSR2Q969E8 191 aaKnown RBP25.86■■□□□ 1.73
TMEM260-203ENST00000539559 IDI1Q13907 227 aa25.86■■□□□ 1.73
TMEM260-203ENST00000539559 NUTM2DQ5VT03 806 aaPredicted RBP25.84■■□□□ 1.73
TMEM260-203ENST00000539559 C14orf93Q9H972 538 aaKnown RBP25.84■■□□□ 1.73
TMEM260-203ENST00000539559 GZF1Q9H116 711 aaPredicted RBP25.84■■□□□ 1.73
TMEM260-203ENST00000539559 U2AF1L5P0DN76 240 aaPredicted RBP25.83■■□□□ 1.73
TMEM260-203ENST00000539559 U2AF1Q01081 240 aaKnown RBP eCLIP25.83■■□□□ 1.73
TMEM260-203ENST00000539559 SETBP1Q9Y6X0 1596 aa25.83■■□□□ 1.73
TMEM260-203ENST00000539559 VGFO15240 615 aaPredicted RBP25.83■■□□□ 1.73
TMEM260-203ENST00000539559 RWDD1Q9H446 243 aaPredicted RBP25.83■■□□□ 1.73
TMEM260-203ENST00000539559 PHF23Q9BUL5 403 aaPredicted RBP25.82■■□□□ 1.72
TMEM260-203ENST00000539559 FAM43AQ8N2R8 423 aa25.82■■□□□ 1.72
TMEM260-203ENST00000539559 IQSEC2Q5JU85 1478 aa25.82■■□□□ 1.72
TMEM260-203ENST00000539559 MFAP1P55081 439 aaKnown RBP25.81■■□□□ 1.72
TMEM260-203ENST00000539559 WDR63Q8IWG1 891 aa25.81■■□□□ 1.72
TMEM260-203ENST00000539559 PREX1Q8TCU6 1659 aa25.81■■□□□ 1.72
TMEM260-203ENST00000539559 MVPQ14764 893 aaKnown RBP25.8■■□□□ 1.72
TMEM260-203ENST00000539559 FTSJ3Q8IY81 847 aaKnown RBP25.8■■□□□ 1.72
TMEM260-203ENST00000539559 RRAGDQ9NQL2 400 aaPredicted RBP25.79■■□□□ 1.72
TMEM260-203ENST00000539559 SAFB2Q14151 953 aaKnown RBP eCLIP25.78■■□□□ 1.72
TMEM260-203ENST00000539559 NEXMIFQ5QGS0 1516 aa25.77■■□□□ 1.72
TMEM260-203ENST00000539559 FBXO31Q5XUX0 539 aaPredicted RBP25.77■■□□□ 1.72
TMEM260-203ENST00000539559 ARHGEF40Q8TER5 1519 aa25.76■■□□□ 1.71
TMEM260-203ENST00000539559 DZIP1LQ8IYY4 767 aaKnown RBP25.76■■□□□ 1.71
TMEM260-203ENST00000539559 CFAP53Q96M91 514 aa25.76■■□□□ 1.71
TMEM260-203ENST00000539559 ZKSCAN2Q63HK3 967 aa25.75■■□□□ 1.71
TMEM260-203ENST00000539559 MYH16Q9H6N6 1097 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms