RNA–Protein interactions for RNA: ENST00000539170.5

GABARAPL1-205, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3 BASIC

Gene GABARAPL1, Length 1,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-205ENST00000539170 POGKQ9P215 609 aa22.69■■□□□ 1.22
GABARAPL1-205ENST00000539170 USP32Q8NFA0 1604 aa22.69■■□□□ 1.22
GABARAPL1-205ENST00000539170 CC2D1BQ5T0F9 858 aaKnown RBP22.68■■□□□ 1.22
GABARAPL1-205ENST00000539170 NINLQ9Y2I6 1382 aa22.68■■□□□ 1.22
GABARAPL1-205ENST00000539170 FAM135BQ49AJ0 1406 aa22.68■■□□□ 1.22
GABARAPL1-205ENST00000539170 EID1Q9Y6B2 187 aa22.68■■□□□ 1.22
GABARAPL1-205ENST00000539170 DIP2AQ14689 1571 aa22.67■■□□□ 1.22
GABARAPL1-205ENST00000539170 SAFB2Q14151 953 aaKnown RBP eCLIP22.66■■□□□ 1.22
GABARAPL1-205ENST00000539170 PLPPR3Q6T4P5 718 aa22.66■■□□□ 1.22
GABARAPL1-205ENST00000539170 TXNDC2Q86VQ3 553 aa22.66■■□□□ 1.22
GABARAPL1-205ENST00000539170 FAM9BQ8IZU0 186 aa22.66■■□□□ 1.22
GABARAPL1-205ENST00000539170 TMC1Q8TDI8 760 aa22.66■■□□□ 1.22
GABARAPL1-205ENST00000539170 SIRT1Q96EB6 747 aa22.66■■□□□ 1.22
GABARAPL1-205ENST00000539170 ATAD2Q6PL18 1390 aa22.65■■□□□ 1.22
GABARAPL1-205ENST00000539170 CARD14Q9BXL6 1004 aa22.64■■□□□ 1.21
GABARAPL1-205ENST00000539170 MINK1Q8N4C8 1332 aaPredicted RBP22.64■■□□□ 1.21
GABARAPL1-205ENST00000539170 SETD1BQ9UPS6 1966 aaKnown RBP22.64■■□□□ 1.21
GABARAPL1-205ENST00000539170 HNRNPUQ00839 825 aaKnown RBP eCLIP22.63■■□□□ 1.21
GABARAPL1-205ENST00000539170 PNISRQ8TF01 805 aaKnown RBP22.63■■□□□ 1.21
GABARAPL1-205ENST00000539170 ANKRD36BQ8N2N9 1353 aa22.63■■□□□ 1.21
GABARAPL1-205ENST00000539170 SCAF1Q9H7N4 1312 aaKnown RBP22.62■■□□□ 1.21
GABARAPL1-205ENST00000539170 PLEKHH1Q9ULM0 1364 aa22.62■■□□□ 1.21
GABARAPL1-205ENST00000539170 SLC12A5Q9H2X9 1139 aa22.62■■□□□ 1.21
GABARAPL1-205ENST00000539170 CABP2Q9NPB3 220 aa22.62■■□□□ 1.21
GABARAPL1-205ENST00000539170 NSD3Q9BZ95 1437 aa22.61■■□□□ 1.21
GABARAPL1-205ENST00000539170 BCANQ96GW7 911 aa22.61■■□□□ 1.21
GABARAPL1-205ENST00000539170 SRPK2P78362 688 aaKnown RBP22.59■■□□□ 1.21
GABARAPL1-205ENST00000539170 WAPLQ7Z5K2 1190 aa22.59■■□□□ 1.21
GABARAPL1-205ENST00000539170 TBX22Q9Y458 520 aa22.57■■□□□ 1.2
GABARAPL1-205ENST00000539170 ADGRB2O60241 1585 aa22.57■■□□□ 1.2
GABARAPL1-205ENST00000539170 CDK19Q9BWU1 502 aa22.56■■□□□ 1.2
GABARAPL1-205ENST00000539170 GTF3C3Q9Y5Q9 886 aa22.56■■□□□ 1.2
GABARAPL1-205ENST00000539170 PTPRUQ92729 1446 aa22.56■■□□□ 1.2
GABARAPL1-205ENST00000539170 PPP2R1AP30153 589 aa22.55■■□□□ 1.2
GABARAPL1-205ENST00000539170 ZBED9Q6R2W3 1325 aa22.55■■□□□ 1.2
GABARAPL1-205ENST00000539170 INSRP06213 1382 aa22.54■■□□□ 1.2
GABARAPL1-205ENST00000539170 ROBO2Q9HCK4 1378 aa22.54■■□□□ 1.2
GABARAPL1-205ENST00000539170 XRN1Q8IZH2 1706 aaKnown RBP22.54■■□□□ 1.2
GABARAPL1-205ENST00000539170 A0A1W2PP64 1363 aa22.54■■□□□ 1.2
GABARAPL1-205ENST00000539170 NSD2O96028 1365 aa22.54■■□□□ 1.2
GABARAPL1-205ENST00000539170 CD163L1Q9NR16 1453 aa22.53■■□□□ 1.2
GABARAPL1-205ENST00000539170 PTCH1Q13635 1447 aa22.53■■□□□ 1.2
GABARAPL1-205ENST00000539170 SLC26A8Q96RN1 970 aa22.51■■□□□ 1.19
GABARAPL1-205ENST00000539170 CGNL1Q0VF96 1302 aa22.51■■□□□ 1.19
GABARAPL1-205ENST00000539170 ATP7BP35670 1465 aa22.51■■□□□ 1.19
GABARAPL1-205ENST00000539170 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.51■■□□□ 1.19
GABARAPL1-205ENST00000539170 PIK3R4Q99570 1358 aa22.51■■□□□ 1.19
GABARAPL1-205ENST00000539170 WASLO00401 505 aaPredicted RBP22.51■■□□□ 1.19
GABARAPL1-205ENST00000539170 TERF2IPQ9NYB0 399 aa22.48■■□□□ 1.19
GABARAPL1-205ENST00000539170 ANKRD26Q9UPS8 1709 aa22.48■■□□□ 1.19
GABARAPL1-205ENST00000539170 ANKLE2Q86XL3 938 aa22.46■■□□□ 1.19
GABARAPL1-205ENST00000539170 BLMP54132 1417 aaPredicted RBP22.45■■□□□ 1.18
GABARAPL1-205ENST00000539170 AMOTL2Q9Y2J4 779 aa22.45■■□□□ 1.18
GABARAPL1-205ENST00000539170 HDGFL2Q7Z4V5 671 aaPredicted RBP22.44■■□□□ 1.18
GABARAPL1-205ENST00000539170 TOPAZ1Q8N9V7 1692 aa22.44■■□□□ 1.18
GABARAPL1-205ENST00000539170 KIF20BQ96Q89 1820 aa22.43■■□□□ 1.18
GABARAPL1-205ENST00000539170 CDC42BPGQ6DT37 1551 aa22.43■■□□□ 1.18
GABARAPL1-205ENST00000539170 MORC1Q86VD1 984 aa22.43■■□□□ 1.18
GABARAPL1-205ENST00000539170 CABP1Q9NZU7 370 aa22.43■■□□□ 1.18
GABARAPL1-205ENST00000539170 CHD2O14647 1828 aaKnown RBP22.42■■□□□ 1.18
GABARAPL1-205ENST00000539170 PPIP5K1Q6PFW1 1433 aa22.42■■□□□ 1.18
GABARAPL1-205ENST00000539170 CPSF1Q10570 1443 aaKnown RBP22.41■■□□□ 1.18
GABARAPL1-205ENST00000539170 AKAP12Q02952 1782 aa22.41■■□□□ 1.18
GABARAPL1-205ENST00000539170 POLR3AO14802 1390 aaPredicted RBP22.4■■□□□ 1.18
GABARAPL1-205ENST00000539170 MON2Q7Z3U7 1717 aa22.4■■□□□ 1.18
GABARAPL1-205ENST00000539170 NUDT16Q96DE0 195 aaKnown RBP22.4■■□□□ 1.18
GABARAPL1-205ENST00000539170 ITSN1Q15811 1721 aa22.39■■□□□ 1.18
GABARAPL1-205ENST00000539170 CCDC61Q9Y6R9 512 aa22.37■■□□□ 1.17
GABARAPL1-205ENST00000539170 NPHP4O75161 1426 aaPredicted RBP22.37■■□□□ 1.17
GABARAPL1-205ENST00000539170 PRR36Q9H6K5 1346 aa22.36■■□□□ 1.17
GABARAPL1-205ENST00000539170 EDC4Q6P2E9 1401 aaKnown RBP22.36■■□□□ 1.17
GABARAPL1-205ENST00000539170 SHPRHQ149N8 1683 aa22.35■■□□□ 1.17
GABARAPL1-205ENST00000539170 WDR43Q15061 677 aaKnown RBP eCLIP22.34■■□□□ 1.17
GABARAPL1-205ENST00000539170 FYB1O15117 783 aa22.34■■□□□ 1.17
GABARAPL1-205ENST00000539170 KCNA6P17658 529 aa22.32■■□□□ 1.16
GABARAPL1-205ENST00000539170 ADAMTS8Q9UP79 889 aa22.32■■□□□ 1.16
GABARAPL1-205ENST00000539170 NRKQ7Z2Y5 1582 aa22.31■■□□□ 1.16
GABARAPL1-205ENST00000539170 SMG6Q86US8 1419 aaKnown RBP22.31■■□□□ 1.16
GABARAPL1-205ENST00000539170 NWD1Q149M9 1564 aa22.3■■□□□ 1.16
GABARAPL1-205ENST00000539170 GGNBP2Q9H3C7 697 aa22.3■■□□□ 1.16
GABARAPL1-205ENST00000539170 FMN2Q9NZ56 1722 aa22.3■■□□□ 1.16
GABARAPL1-205ENST00000539170 NKTRP30414 1462 aaKnown RBP22.29■■□□□ 1.16
GABARAPL1-205ENST00000539170 PLEKHG3A1L390 1219 aa22.28■■□□□ 1.16
GABARAPL1-205ENST00000539170 TNNT2P45379 298 aaPredicted RBP22.28■■□□□ 1.16
GABARAPL1-205ENST00000539170 ZNF692Q9BU19 519 aaPredicted RBP22.28■■□□□ 1.16
GABARAPL1-205ENST00000539170 NALCNQ8IZF0 1738 aa22.28■■□□□ 1.16
GABARAPL1-205ENST00000539170 ANKARQ7Z5J8 1434 aa22.28■■□□□ 1.16
GABARAPL1-205ENST00000539170 NCKAP5LQ9HCH0 1330 aa22.28■■□□□ 1.16
GABARAPL1-205ENST00000539170 MTHFSP49914 203 aa22.26■■□□□ 1.15
GABARAPL1-205ENST00000539170 CFAP53Q96M91 514 aa22.25■■□□□ 1.15
GABARAPL1-205ENST00000539170 RGPD8O14715 1765 aaPredicted RBP22.24■■□□□ 1.15
GABARAPL1-205ENST00000539170 NUDCQ9Y266 331 aa22.24■■□□□ 1.15
GABARAPL1-205ENST00000539170 COL3A1P02461 1466 aaPredicted RBP22.23■■□□□ 1.15
GABARAPL1-205ENST00000539170 PDE3BQ13370 1112 aa22.23■■□□□ 1.15
GABARAPL1-205ENST00000539170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.23■■□□□ 1.15
GABARAPL1-205ENST00000539170 USP6P35125 1406 aa22.21■■□□□ 1.15
GABARAPL1-205ENST00000539170 ACEP12821 1306 aa22.21■■□□□ 1.15
GABARAPL1-205ENST00000539170 ADGRL3Q9HAR2 1447 aa22.21■■□□□ 1.15
GABARAPL1-205ENST00000539170 SENP3-EIF4A1A0A087X0R7 540 aa22.2■■□□□ 1.14
GABARAPL1-205ENST00000539170 SSH2Q76I76 1423 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms