RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 BCAMP50895 628 aa8.01□□□□□ -1.13
VPS33A-203ENST00000536212 ZC3H15Q8WU90 426 aaKnown RBP8□□□□□ -1.13
VPS33A-203ENST00000536212 MRC2Q9UBG0 1479 aa8□□□□□ -1.13
VPS33A-203ENST00000536212 PBRM1Q86U86 1689 aa7.99□□□□□ -1.13
VPS33A-203ENST00000536212 PROX2Q3B8N5 592 aa7.98□□□□□ -1.13
VPS33A-203ENST00000536212 HIRIP3Q9BW71 556 aaPredicted RBP7.98□□□□□ -1.13
VPS33A-203ENST00000536212 WBP1LQ9NX94 342 aa7.98□□□□□ -1.13
VPS33A-203ENST00000536212 KIAA0586Q9BVV6 1533 aa7.98□□□□□ -1.13
VPS33A-203ENST00000536212 GFRA3O60609 400 aa7.97□□□□□ -1.13
VPS33A-203ENST00000536212 ZFRQ96KR1 1074 aaKnown RBP7.97□□□□□ -1.13
VPS33A-203ENST00000536212 MPHOSPH9Q99550 1183 aa7.97□□□□□ -1.13
VPS33A-203ENST00000536212 RRP7BPQ9NSQ0 103 aa7.97□□□□□ -1.13
VPS33A-203ENST00000536212 IFT140Q96RY7 1462 aa7.97□□□□□ -1.13
VPS33A-203ENST00000536212 CDK13Q14004 1512 aaKnown RBP7.97□□□□□ -1.13
VPS33A-203ENST00000536212 ANKRD30BQ9BXX2 1392 aa7.97□□□□□ -1.13
VPS33A-203ENST00000536212 KDM6BO15054 1643 aa7.96□□□□□ -1.13
VPS33A-203ENST00000536212 HSPA5P11021 654 aaKnown RBP7.96□□□□□ -1.14
VPS33A-203ENST00000536212 ABCC5O15440 1437 aa7.95□□□□□ -1.14
VPS33A-203ENST00000536212 DAPK1P53355 1430 aa7.95□□□□□ -1.14
VPS33A-203ENST00000536212 DISP1Q96F81 1524 aa7.95□□□□□ -1.14
VPS33A-203ENST00000536212 SPDYE16A6NNV3 312 aaPredicted RBP7.95□□□□□ -1.14
VPS33A-203ENST00000536212 DPYSL4O14531 572 aa7.95□□□□□ -1.14
VPS33A-203ENST00000536212 ONECUT3O60422 494 aaPredicted RBP7.95□□□□□ -1.14
VPS33A-203ENST00000536212 NEFLP07196 543 aa7.95□□□□□ -1.14
VPS33A-203ENST00000536212 COL9A1P20849 921 aa7.95□□□□□ -1.14
VPS33A-203ENST00000536212 EIF4G2P78344 907 aaKnown RBP eCLIP7.95□□□□□ -1.14
VPS33A-203ENST00000536212 EMILIN3Q9NT22 766 aa7.95□□□□□ -1.14
VPS33A-203ENST00000536212 WASHC2AQ641Q2 1341 aa7.95□□□□□ -1.14
VPS33A-203ENST00000536212 NCOA1Q15788 1441 aa7.95□□□□□ -1.14
VPS33A-203ENST00000536212 RPRD2Q5VT52 1461 aaKnown RBP7.94□□□□□ -1.14
VPS33A-203ENST00000536212 KIAA0556O60303 1618 aa7.94□□□□□ -1.14
VPS33A-203ENST00000536212 DNMT1P26358 1616 aaKnown RBP7.94□□□□□ -1.14
VPS33A-203ENST00000536212 PCDHGA10Q9Y5H3 936 aa7.94□□□□□ -1.14
VPS33A-203ENST00000536212 CNTLNQ9NXG0 1405 aa7.94□□□□□ -1.14
VPS33A-203ENST00000536212 NUP153P49790 1475 aaKnown RBP7.94□□□□□ -1.14
VPS33A-203ENST00000536212 TEX14Q8IWB6 1497 aa7.94□□□□□ -1.14
VPS33A-203ENST00000536212 MLLT3P42568 568 aaPredicted RBP7.93□□□□□ -1.14
VPS33A-203ENST00000536212 PDIA6Q15084 440 aa7.93□□□□□ -1.14
VPS33A-203ENST00000536212 L3MBTL2Q969R5 705 aa7.93□□□□□ -1.14
VPS33A-203ENST00000536212 TRIM52Q96A61 297 aa7.93□□□□□ -1.14
VPS33A-203ENST00000536212 KIAA1468Q9P260 1216 aa7.93□□□□□ -1.14
VPS33A-203ENST00000536212 CHIC2Q9UKJ5 165 aa7.93□□□□□ -1.14
VPS33A-203ENST00000536212 SPATA31E1Q6ZUB1 1445 aa7.93□□□□□ -1.14
VPS33A-203ENST00000536212 NRG2O14511 850 aaPredicted RBP7.92□□□□□ -1.14
VPS33A-203ENST00000536212 ERICH6BQ5W0A0 696 aa7.92□□□□□ -1.14
VPS33A-203ENST00000536212 FBXW7Q969H0 707 aa7.92□□□□□ -1.14
VPS33A-203ENST00000536212 CCDC7Q96M83 1385 aa7.92□□□□□ -1.14
VPS33A-203ENST00000536212 ZMYND10O75800 440 aa7.91□□□□□ -1.14
VPS33A-203ENST00000536212 SLC24A3Q9HC58 644 aa7.91□□□□□ -1.14
VPS33A-203ENST00000536212 PODXL2Q9NZ53 605 aa7.91□□□□□ -1.14
VPS33A-203ENST00000536212 TROQ12816 1431 aaPredicted RBP7.91□□□□□ -1.14
VPS33A-203ENST00000536212 ADGRL2O95490 1459 aa7.91□□□□□ -1.14
VPS33A-203ENST00000536212 GRIN2AQ12879 1464 aa7.91□□□□□ -1.14
VPS33A-203ENST00000536212 ZNF608Q9ULD9 1512 aaPredicted RBP7.91□□□□□ -1.14
VPS33A-203ENST00000536212 RAPGEF6Q8TEU7 1601 aa7.91□□□□□ -1.14
VPS33A-203ENST00000536212 PZPP20742 1482 aa7.9□□□□□ -1.14
VPS33A-203ENST00000536212 MAP3K9P80192 1104 aa7.9□□□□□ -1.14
VPS33A-203ENST00000536212 NBPF8Q3BBV2 869 aa7.9□□□□□ -1.14
VPS33A-203ENST00000536212 RBM26Q5T8P6 1007 aaKnown RBP7.9□□□□□ -1.14
VPS33A-203ENST00000536212 TYW1BQ6NUM6 668 aa7.9□□□□□ -1.14
VPS33A-203ENST00000536212 GPIHBP1Q8IV16 184 aa7.9□□□□□ -1.14
VPS33A-203ENST00000536212 TSR3Q9UJK0 312 aaKnown RBP7.9□□□□□ -1.14
VPS33A-203ENST00000536212 CDK11AQ9UQ88 783 aaPredicted RBP7.9□□□□□ -1.14
VPS33A-203ENST00000536212 MBD5Q9P267 1494 aa7.89□□□□□ -1.15
VPS33A-203ENST00000536212 C11orf95C9JLR9 678 aaPredicted RBP7.89□□□□□ -1.15
VPS33A-203ENST00000536212 ANP32EQ9BTT0 268 aa7.89□□□□□ -1.15
VPS33A-203ENST00000536212 GPATCH8Q9UKJ3 1502 aaKnown RBP7.88□□□□□ -1.15
VPS33A-203ENST00000536212 MAGI1Q96QZ7 1491 aaPredicted RBP7.88□□□□□ -1.15
VPS33A-203ENST00000536212 PHF14O94880 888 aa7.88□□□□□ -1.15
VPS33A-203ENST00000536212 BRPF1P55201 1214 aaPredicted RBP7.88□□□□□ -1.15
VPS33A-203ENST00000536212 HNRNPUQ00839 825 aaKnown RBP eCLIP7.88□□□□□ -1.15
VPS33A-203ENST00000536212 FAM98CQ17RN3 349 aaKnown RBP7.88□□□□□ -1.15
VPS33A-203ENST00000536212 BARGINQ6ZT62 677 aa7.88□□□□□ -1.15
VPS33A-203ENST00000536212 PRKRIP1Q9H875 184 aaPredicted RBP7.88□□□□□ -1.15
VPS33A-203ENST00000536212 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.88□□□□□ -1.15
VPS33A-203ENST00000536212 ADCY10Q96PN6 1610 aa7.88□□□□□ -1.15
VPS33A-203ENST00000536212 ZNF644Q9H582 1327 aaPredicted RBP7.87□□□□□ -1.15
VPS33A-203ENST00000536212 PRKD2Q9BZL6 878 aa7.87□□□□□ -1.15
VPS33A-203ENST00000536212 SEPT9Q9UHD8 586 aaPredicted RBP7.87□□□□□ -1.15
VPS33A-203ENST00000536212 HPS5Q9UPZ3 1129 aa7.87□□□□□ -1.15
VPS33A-203ENST00000536212 CAMSAP2Q08AD1 1489 aa7.87□□□□□ -1.15
VPS33A-203ENST00000536212 KIAA1107Q9UPP5 1409 aa7.86□□□□□ -1.15
VPS33A-203ENST00000536212 NEUROD2Q15784 382 aa7.86□□□□□ -1.15
VPS33A-203ENST00000536212 LRCH3Q96II8 777 aa7.86□□□□□ -1.15
VPS33A-203ENST00000536212 RBM19Q9Y4C8 960 aaKnown RBP7.86□□□□□ -1.15
VPS33A-203ENST00000536212 V9GY48 417 aaPredicted RBP7.86□□□□□ -1.15
VPS33A-203ENST00000536212 NUP160Q12769 1436 aa7.86□□□□□ -1.15
VPS33A-203ENST00000536212 PRG4Q92954 1404 aaPredicted RBP7.86□□□□□ -1.15
VPS33A-203ENST00000536212 KIF7Q2M1P5 1343 aa7.85□□□□□ -1.15
VPS33A-203ENST00000536212 ARID4BQ4LE39 1312 aaPredicted RBP7.85□□□□□ -1.15
VPS33A-203ENST00000536212 TRIM6-TRIM34B2RNG4 842 aa7.85□□□□□ -1.15
VPS33A-203ENST00000536212 CCDC184Q52MB2 194 aa7.85□□□□□ -1.15
VPS33A-203ENST00000536212 ZNF787Q6DD87 383 aa7.85□□□□□ -1.15
VPS33A-203ENST00000536212 SYNJ2O15056 1496 aa7.85□□□□□ -1.15
VPS33A-203ENST00000536212 ITSN2Q9NZM3 1697 aa7.85□□□□□ -1.15
VPS33A-203ENST00000536212 UHRF1BP1Q6BDS2 1440 aa7.85□□□□□ -1.15
VPS33A-203ENST00000536212 EIF4G3O43432 1585 aaKnown RBP7.84□□□□□ -1.15
VPS33A-203ENST00000536212 CEP170Q5SW79 1584 aa7.84□□□□□ -1.15
VPS33A-203ENST00000536212 ZBED9Q6R2W3 1325 aa7.84□□□□□ -1.15
VPS33A-203ENST00000536212 ADGBQ8N7X0 1667 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms