RNA–Protein interactions for RNA: ENST00000534995.1

KNTC1-206, Transcript of kinetochore associated 1, humanhuman

TSL 2 BASIC

Gene KNTC1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-206ENST00000534995 PROCA1Q8NCQ7 364 aaPredicted RBP12.82□□□□□ -0.36
KNTC1-206ENST00000534995 PCDHGC3Q9UN70 934 aa12.82□□□□□ -0.36
KNTC1-206ENST00000534995 FANCD2Q9BXW9 1451 aa12.81□□□□□ -0.36
KNTC1-206ENST00000534995 USP46P62068 366 aa12.81□□□□□ -0.36
KNTC1-206ENST00000534995 SKIV2LQ15477 1246 aaKnown RBP12.81□□□□□ -0.36
KNTC1-206ENST00000534995 MORN1Q5T089 497 aa12.81□□□□□ -0.36
KNTC1-206ENST00000534995 RSBN1LQ6PCB5 846 aaPredicted RBP12.81□□□□□ -0.36
KNTC1-206ENST00000534995 SPTLC1O15269 473 aa12.8□□□□□ -0.36
KNTC1-206ENST00000534995 ATP6V1AP38606 617 aa12.8□□□□□ -0.36
KNTC1-206ENST00000534995 RIC3Q7Z5B4 369 aa12.8□□□□□ -0.36
KNTC1-206ENST00000534995 RSPH6AQ9H0K4 717 aa12.8□□□□□ -0.36
KNTC1-206ENST00000534995 GOPCQ9HD26 462 aa12.8□□□□□ -0.36
KNTC1-206ENST00000534995 SYNJ1O43426 1573 aa12.8□□□□□ -0.36
KNTC1-206ENST00000534995 BLOC1S3Q6QNY0 202 aa12.79□□□□□ -0.36
KNTC1-206ENST00000534995 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
KNTC1-206ENST00000534995 BIVM-ERCC5R4GMW8 1640 aa12.79□□□□□ -0.36
KNTC1-206ENST00000534995 CEP164Q9UPV0 1460 aa12.78□□□□□ -0.36
KNTC1-206ENST00000534995 CLK2P49760 499 aaKnown RBP12.78□□□□□ -0.36
KNTC1-206ENST00000534995 DIXDC1Q155Q3 683 aa12.78□□□□□ -0.36
KNTC1-206ENST00000534995 PRR14Q9BWN1 585 aa12.78□□□□□ -0.36
KNTC1-206ENST00000534995 PCDHB3Q9Y5E6 796 aa12.78□□□□□ -0.36
KNTC1-206ENST00000534995 HCSTQ9UBK5 93 aa12.77□□□□□ -0.37
KNTC1-206ENST00000534995 SLC27A5Q9Y2P5 690 aa12.77□□□□□ -0.37
KNTC1-206ENST00000534995 FDX1P10109 184 aa12.76□□□□□ -0.37
KNTC1-206ENST00000534995 NYAP1Q6ZVC0 841 aa12.76□□□□□ -0.37
KNTC1-206ENST00000534995 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.76□□□□□ -0.37
KNTC1-206ENST00000534995 ERCC6Q03468 1493 aa12.76□□□□□ -0.37
KNTC1-206ENST00000534995 PDS5BQ9NTI5 1447 aa12.75□□□□□ -0.37
KNTC1-206ENST00000534995 TOP2BQ02880 1626 aa12.74□□□□□ -0.37
KNTC1-206ENST00000534995 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
KNTC1-206ENST00000534995 GJA5P36382 358 aa12.74□□□□□ -0.37
KNTC1-206ENST00000534995 COPS2P61201 443 aa12.74□□□□□ -0.37
KNTC1-206ENST00000534995 QPCTQ16769 361 aa12.74□□□□□ -0.37
KNTC1-206ENST00000534995 TJAP1Q5JTD0 557 aa12.74□□□□□ -0.37
KNTC1-206ENST00000534995 MTRQ99707 1265 aa12.74□□□□□ -0.37
KNTC1-206ENST00000534995 CUX1P39880 1505 aa12.73□□□□□ -0.37
KNTC1-206ENST00000534995 CSPP1Q1MSJ5 1256 aa12.73□□□□□ -0.37
KNTC1-206ENST00000534995 SCUBE3Q8IX30 993 aa12.73□□□□□ -0.37
KNTC1-206ENST00000534995 SYMPKQ92797 1274 aaKnown RBP12.73□□□□□ -0.37
KNTC1-206ENST00000534995 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
KNTC1-206ENST00000534995 WRNQ14191 1432 aaPredicted RBP eCLIP12.72□□□□□ -0.37
KNTC1-206ENST00000534995 TUSC1Q2TAM9 212 aa12.72□□□□□ -0.37
KNTC1-206ENST00000534995 RNF19BQ6ZMZ0 732 aa12.72□□□□□ -0.37
KNTC1-206ENST00000534995 CABLES1Q8TDN4 633 aa12.72□□□□□ -0.37
KNTC1-206ENST00000534995 ZNF516Q92618 1163 aa12.72□□□□□ -0.37
KNTC1-206ENST00000534995 GRIPAP1Q4V328 841 aa12.71□□□□□ -0.37
KNTC1-206ENST00000534995 THAP11Q96EK4 314 aa12.71□□□□□ -0.37
KNTC1-206ENST00000534995 PCMTD1Q96MG8 357 aaPredicted RBP12.71□□□□□ -0.37
KNTC1-206ENST00000534995 TLL1O43897 1013 aa12.69□□□□□ -0.38
KNTC1-206ENST00000534995 LILRB3O75022 631 aa12.69□□□□□ -0.38
KNTC1-206ENST00000534995 URB2Q14146 1524 aaKnown RBP12.68□□□□□ -0.38
KNTC1-206ENST00000534995 MRC2Q9UBG0 1479 aa12.68□□□□□ -0.38
KNTC1-206ENST00000534995 HRCP23327 699 aa12.68□□□□□ -0.38
KNTC1-206ENST00000534995 RTL5Q5HYW3 569 aaPredicted RBP12.68□□□□□ -0.38
KNTC1-206ENST00000534995 NR1I2O75469 434 aa12.67□□□□□ -0.38
KNTC1-206ENST00000534995 BRICD5Q6PL45 260 aa12.67□□□□□ -0.38
KNTC1-206ENST00000534995 TOPBP1Q92547 1522 aa12.67□□□□□ -0.38
KNTC1-206ENST00000534995 ZPR1O75312 459 aa12.66□□□□□ -0.38
KNTC1-206ENST00000534995 PPP2R2DQ66LE6 453 aa12.65□□□□□ -0.38
KNTC1-206ENST00000534995 NKX2-3Q8TAU0 364 aa12.65□□□□□ -0.38
KNTC1-206ENST00000534995 IL21Q9HBE4 155 aa12.65□□□□□ -0.38
KNTC1-206ENST00000534995 WDR62O43379 1518 aa12.65□□□□□ -0.38
KNTC1-206ENST00000534995 WDR97A6NE52 1622 aa12.65□□□□□ -0.38
KNTC1-206ENST00000534995 ITGBL1O95965 494 aaPredicted RBP12.64□□□□□ -0.39
KNTC1-206ENST00000534995 PRPF38BQ5VTL8 546 aaKnown RBP12.64□□□□□ -0.39
KNTC1-206ENST00000534995 MTMR2Q13614 643 aa12.63□□□□□ -0.39
KNTC1-206ENST00000534995 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
KNTC1-206ENST00000534995 SALL2Q9Y467 1007 aaPredicted RBP12.63□□□□□ -0.39
KNTC1-206ENST00000534995 FGD5Q6ZNL6 1462 aa12.63□□□□□ -0.39
KNTC1-206ENST00000534995 CFAP99D6REC4 459 aa12.62□□□□□ -0.39
KNTC1-206ENST00000534995 C6orf229H3BNL8 230 aa12.62□□□□□ -0.39
KNTC1-206ENST00000534995 FAM160A2Q8N612 972 aaPredicted RBP12.62□□□□□ -0.39
KNTC1-206ENST00000534995 RFC5P40937 340 aa12.61□□□□□ -0.39
KNTC1-206ENST00000534995 Q3C1V9 767 aa12.61□□□□□ -0.39
KNTC1-206ENST00000534995 ATP1B4Q9UN42 357 aaPredicted RBP12.61□□□□□ -0.39
KNTC1-206ENST00000534995 FMNL1O95466 1100 aaPredicted RBP12.6□□□□□ -0.39
KNTC1-206ENST00000534995 RETREG3Q86VR2 466 aa12.59□□□□□ -0.39
KNTC1-206ENST00000534995 SPSB2Q99619 263 aa12.59□□□□□ -0.39
KNTC1-206ENST00000534995 PRDM9Q9NQV7 894 aa12.59□□□□□ -0.39
KNTC1-206ENST00000534995 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
KNTC1-206ENST00000534995 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
KNTC1-206ENST00000534995 NUTM2DQ5VT03 806 aaPredicted RBP12.58□□□□□ -0.4
KNTC1-206ENST00000534995 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
KNTC1-206ENST00000534995 USB1Q9BQ65 265 aaKnown RBP12.58□□□□□ -0.4
KNTC1-206ENST00000534995 PBRM1Q86U86 1689 aa12.57□□□□□ -0.4
KNTC1-206ENST00000534995 ADH1BP00325 375 aa12.57□□□□□ -0.4
KNTC1-206ENST00000534995 PRR7Q8TB68 274 aa12.57□□□□□ -0.4
KNTC1-206ENST00000534995 POLA1P09884 1462 aaPredicted RBP12.57□□□□□ -0.4
KNTC1-206ENST00000534995 KCNC4Q03721 635 aa12.56□□□□□ -0.4
KNTC1-206ENST00000534995 TARBP1Q13395 1621 aaKnown RBP12.55□□□□□ -0.4
KNTC1-206ENST00000534995 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
KNTC1-206ENST00000534995 SPDYE5A6NIY4 337 aa12.54□□□□□ -0.4
KNTC1-206ENST00000534995 MSS51Q4VC12 460 aa12.54□□□□□ -0.4
KNTC1-206ENST00000534995 RAD54L2Q9Y4B4 1467 aa12.53□□□□□ -0.4
KNTC1-206ENST00000534995 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
KNTC1-206ENST00000534995 PER1O15534 1290 aaPredicted RBP12.51□□□□□ -0.41
KNTC1-206ENST00000534995 CTDSPL2Q05D32 466 aa12.51□□□□□ -0.41
KNTC1-206ENST00000534995 DXOO77932 396 aaKnown RBP12.5□□□□□ -0.41
KNTC1-206ENST00000534995 S1PR4O95977 384 aa12.5□□□□□ -0.41
KNTC1-206ENST00000534995 EIF4G3O43432 1585 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms