RNA–Protein interactions for RNA: ENST00000534336.1

MALAT1-202, metastasis associated lung adenocarcinoma transcript 1, humanhuman

BASIC

Gene MALAT1, Length 8,708 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-202ENST00000534336 GTPBP4Q9BZE4 634 aaKnown RBP11.04□□□□□ -0.64
MALAT1-202ENST00000534336 CDK5RAP3Q96JB5 506 aa11.03□□□□□ -0.64
MALAT1-202ENST00000534336 NEBLO76041 1014 aa11.03□□□□□ -0.64
MALAT1-202ENST00000534336 EEA1Q15075 1411 aa11.03□□□□□ -0.64
MALAT1-202ENST00000534336 MAP9Q49MG5 647 aa11.03□□□□□ -0.64
MALAT1-202ENST00000534336 SLC4A10Q6U841 1118 aa11.03□□□□□ -0.64
MALAT1-202ENST00000534336 SEPT14Q6ZU15 432 aa11.03□□□□□ -0.64
MALAT1-202ENST00000534336 SOX12O15370 315 aa11.03□□□□□ -0.64
MALAT1-202ENST00000534336 STIM1Q13586 685 aa11.03□□□□□ -0.64
MALAT1-202ENST00000534336 CCER2I3L3R5 266 aa11.03□□□□□ -0.64
MALAT1-202ENST00000534336 WDR66Q8TBY9 1149 aa11.03□□□□□ -0.64
MALAT1-202ENST00000534336 CSB-PGBD3P0DP91 1061 aa11.03□□□□□ -0.64
MALAT1-202ENST00000534336 ANAPC15P60006 121 aa11.03□□□□□ -0.64
MALAT1-202ENST00000534336 JAKMIP3Q5VZ66 844 aa11.02□□□□□ -0.65
MALAT1-202ENST00000534336 TIGD1Q96MW7 591 aa11.02□□□□□ -0.65
MALAT1-202ENST00000534336 SCRIBQ14160 1630 aa11.01□□□□□ -0.65
MALAT1-202ENST00000534336 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
MALAT1-202ENST00000534336 ANO2Q9NQ90 1003 aa11.01□□□□□ -0.65
MALAT1-202ENST00000534336 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.01□□□□□ -0.65
MALAT1-202ENST00000534336 CENPQQ7L2Z9 268 aaPredicted RBP11.01□□□□□ -0.65
MALAT1-202ENST00000534336 SMC2O95347 1197 aa11.01□□□□□ -0.65
MALAT1-202ENST00000534336 ZCCHC6Q5VYS8 1495 aaKnown RBP11.01□□□□□ -0.65
MALAT1-202ENST00000534336 KIF3CO14782 793 aa11.01□□□□□ -0.65
MALAT1-202ENST00000534336 FBXW7Q969H0 707 aa11.01□□□□□ -0.65
MALAT1-202ENST00000534336 KINO60870 393 aaKnown RBP11.01□□□□□ -0.65
MALAT1-202ENST00000534336 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
MALAT1-202ENST00000534336 PDIA4P13667 645 aaKnown RBP11.01□□□□□ -0.65
MALAT1-202ENST00000534336 GCOM1H8Y6P7 765 aaPredicted RBP11□□□□□ -0.65
MALAT1-202ENST00000534336 MYZAPP0CAP1 466 aa11□□□□□ -0.65
MALAT1-202ENST00000534336 TRIM5Q9C035 493 aa11□□□□□ -0.65
MALAT1-202ENST00000534336 CPSF2Q9P2I0 782 aaKnown RBP11□□□□□ -0.65
MALAT1-202ENST00000534336 SMC3Q9UQE7 1217 aa11□□□□□ -0.65
MALAT1-202ENST00000534336 TMCO3Q6UWJ1 677 aa11□□□□□ -0.65
MALAT1-202ENST00000534336 DDX46Q7L014 1031 aaKnown RBP11□□□□□ -0.65
MALAT1-202ENST00000534336 NINLQ9Y2I6 1382 aa10.99□□□□□ -0.65
MALAT1-202ENST00000534336 C6orf163Q5TEZ5 329 aa10.99□□□□□ -0.65
MALAT1-202ENST00000534336 HOMER2Q9NSB8 354 aa10.99□□□□□ -0.65
MALAT1-202ENST00000534336 DZIP1LQ8IYY4 767 aaKnown RBP10.99□□□□□ -0.65
MALAT1-202ENST00000534336 DACH1Q9UI36 760 aa10.99□□□□□ -0.65
MALAT1-202ENST00000534336 SMC1AQ14683 1233 aaKnown RBP10.99□□□□□ -0.65
MALAT1-202ENST00000534336 GPATCH11Q8N954 259 aa10.99□□□□□ -0.65
MALAT1-202ENST00000534336 CLIP1P30622 1438 aa10.98□□□□□ -0.65
MALAT1-202ENST00000534336 CCDC6Q16204 474 aa10.98□□□□□ -0.65
MALAT1-202ENST00000534336 NAP1L3Q99457 506 aaPredicted RBP10.98□□□□□ -0.65
MALAT1-202ENST00000534336 FERP16591 822 aa10.98□□□□□ -0.65
MALAT1-202ENST00000534336 DHX37Q8IY37 1157 aaKnown RBP10.98□□□□□ -0.65
MALAT1-202ENST00000534336 SDF4Q9BRK5 362 aa10.98□□□□□ -0.65
MALAT1-202ENST00000534336 CALCOCO1Q9P1Z2 691 aa10.98□□□□□ -0.65
MALAT1-202ENST00000534336 PPFIBP1Q86W92 1011 aa10.98□□□□□ -0.65
MALAT1-202ENST00000534336 LRRFIP2Q9Y608 721 aaKnown RBP10.98□□□□□ -0.65
MALAT1-202ENST00000534336 DZIP1Q86YF9 867 aaKnown RBP10.98□□□□□ -0.65
MALAT1-202ENST00000534336 SEPT10Q9P0V9 454 aa10.97□□□□□ -0.65
MALAT1-202ENST00000534336 PDCL2Q8N4E4 241 aa10.97□□□□□ -0.65
MALAT1-202ENST00000534336 TCHPQ9BT92 498 aa10.97□□□□□ -0.65
MALAT1-202ENST00000534336 U2AF1L5P0DN76 240 aaPredicted RBP10.97□□□□□ -0.65
MALAT1-202ENST00000534336 CETN2P41208 172 aa10.97□□□□□ -0.65
MALAT1-202ENST00000534336 U2AF1Q01081 240 aaKnown RBP eCLIP10.97□□□□□ -0.65not detected■■□□□ 13.9
MALAT1-202ENST00000534336 PPM1FP49593 454 aaPredicted RBP10.97□□□□□ -0.65
MALAT1-202ENST00000534336 FAM193AP78312 1265 aa10.97□□□□□ -0.65
MALAT1-202ENST00000534336 BCL11BQ9C0K0 894 aaPredicted RBP10.97□□□□□ -0.65
MALAT1-202ENST00000534336 MYH9P35579 1960 aaKnown RBP10.97□□□□□ -0.65
MALAT1-202ENST00000534336 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.97□□□□□ -0.65
MALAT1-202ENST00000534336 CRACR2AQ9BSW2 395 aa10.97□□□□□ -0.65
MALAT1-202ENST00000534336 RBM28Q9NW13 759 aaKnown RBP10.97□□□□□ -0.65
MALAT1-202ENST00000534336 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
MALAT1-202ENST00000534336 AEBP1Q8IUX7 1158 aa10.96□□□□□ -0.65
MALAT1-202ENST00000534336 DNAJC2Q99543 621 aaKnown RBP10.96□□□□□ -0.65
MALAT1-202ENST00000534336 PDCL3Q9H2J4 239 aa10.96□□□□□ -0.65
MALAT1-202ENST00000534336 MRE11P49959 708 aa10.96□□□□□ -0.65
MALAT1-202ENST00000534336 RALYLQ86SE5 291 aaKnown RBP10.96□□□□□ -0.65
MALAT1-202ENST00000534336 SREK1Q8WXA9 508 aaKnown RBP10.96□□□□□ -0.65
MALAT1-202ENST00000534336 GBP3Q9H0R5 595 aa10.96□□□□□ -0.65
MALAT1-202ENST00000534336 ANKRD45Q5TZF3 282 aa10.96□□□□□ -0.66
MALAT1-202ENST00000534336 NOL3O60936 208 aaKnown RBP10.96□□□□□ -0.66
MALAT1-202ENST00000534336 CROCCQ5TZA2 2017 aa10.96□□□□□ -0.66
MALAT1-202ENST00000534336 PLEKHD1A6NEE1 506 aa10.95□□□□□ -0.66
MALAT1-202ENST00000534336 KIAA1328Q86T90 577 aa10.95□□□□□ -0.66
MALAT1-202ENST00000534336 CCDC148Q8NFR7 591 aa10.95□□□□□ -0.66
MALAT1-202ENST00000534336 CHMP7Q8WUX9 453 aaPredicted RBP10.95□□□□□ -0.66
MALAT1-202ENST00000534336 CCDC102AQ96A19 550 aa10.95□□□□□ -0.66
MALAT1-202ENST00000534336 VPS37CA5D8V6 355 aaPredicted RBP10.95□□□□□ -0.66
MALAT1-202ENST00000534336 SART3Q15020 963 aaKnown RBP10.95□□□□□ -0.66
MALAT1-202ENST00000534336 ERICH4A6NGS2 130 aa10.95□□□□□ -0.66
MALAT1-202ENST00000534336 ROCK2O75116 1388 aaKnown RBP10.95□□□□□ -0.66
MALAT1-202ENST00000534336 SETD1BQ9UPS6 1966 aaKnown RBP10.95□□□□□ -0.66
MALAT1-202ENST00000534336 ZNF397Q8NF99 534 aaPredicted RBP10.95□□□□□ -0.66
MALAT1-202ENST00000534336 PDCP20941 246 aa10.95□□□□□ -0.66
MALAT1-202ENST00000534336 PSMA5P28066 241 aa10.94□□□□□ -0.66
MALAT1-202ENST00000534336 PABPN1Q86U42 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
MALAT1-202ENST00000534336 EPB41L2O43491 1005 aaKnown RBP10.94□□□□□ -0.66
MALAT1-202ENST00000534336 CBFA2T2O43439 604 aa10.94□□□□□ -0.66
MALAT1-202ENST00000534336 SLC3A2P08195 630 aaKnown RBP10.94□□□□□ -0.66
MALAT1-202ENST00000534336 KRT18P05783 430 aaKnown RBP10.94□□□□□ -0.66
MALAT1-202ENST00000534336 BRPF1P55201 1214 aaPredicted RBP10.94□□□□□ -0.66
MALAT1-202ENST00000534336 MPHOSPH10O00566 681 aaKnown RBP10.94□□□□□ -0.66
MALAT1-202ENST00000534336 TSPY26PQ9H489 355 aa10.94□□□□□ -0.66
MALAT1-202ENST00000534336 INTS3Q68E01 1043 aaKnown RBP10.93□□□□□ -0.66
MALAT1-202ENST00000534336 UBE2Q2Q8WVN8 375 aa10.93□□□□□ -0.66
MALAT1-202ENST00000534336 PUS7Q96PZ0 661 aaKnown RBP10.93□□□□□ -0.66
MALAT1-202ENST00000534336 SPECC1LQ69YQ0 1117 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms