RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ZNF326Q5BKZ1 582 aaKnown RBP8.49□□□□□ -1.05
HMGB1P42-201ENST00000532126 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.49□□□□□ -1.05
HMGB1P42-201ENST00000532126 STK24Q9Y6E0 443 aa8.49□□□□□ -1.05
HMGB1P42-201ENST00000532126 TRPM2O94759 1503 aa8.49□□□□□ -1.05
HMGB1P42-201ENST00000532126 TMEM131LA2VDJ0 1609 aa8.48□□□□□ -1.05
HMGB1P42-201ENST00000532126 SGIP1Q9BQI5 828 aa8.48□□□□□ -1.05
HMGB1P42-201ENST00000532126 BCL11BQ9C0K0 894 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P42-201ENST00000532126 WDR70Q9NW82 654 aa8.48□□□□□ -1.05
HMGB1P42-201ENST00000532126 IQGAP1P46940 1657 aa8.48□□□□□ -1.05
HMGB1P42-201ENST00000532126 SPHKAPQ2M3C7 1700 aa8.48□□□□□ -1.05
HMGB1P42-201ENST00000532126 LTBP4Q8N2S1 1624 aa8.47□□□□□ -1.05
HMGB1P42-201ENST00000532126 ZFYVE9O95405 1425 aa8.47□□□□□ -1.05
HMGB1P42-201ENST00000532126 NUTM2DQ5VT03 806 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P42-201ENST00000532126 FBXO41Q8TF61 875 aa8.47□□□□□ -1.05
HMGB1P42-201ENST00000532126 SLC26A8Q96RN1 970 aa8.47□□□□□ -1.05
HMGB1P42-201ENST00000532126 CCDC9Q9Y3X0 531 aaKnown RBP8.47□□□□□ -1.05
HMGB1P42-201ENST00000532126 CCDC144AA2RUR9 1427 aa8.46□□□□□ -1.05
HMGB1P42-201ENST00000532126 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P42-201ENST00000532126 ILDR1Q86SU0 546 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P42-201ENST00000532126 ZFP91Q96JP5 570 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P42-201ENST00000532126 CLTCL1P53675 1640 aa8.46□□□□□ -1.06
HMGB1P42-201ENST00000532126 PLEKHG1Q9ULL1 1385 aa8.46□□□□□ -1.06
HMGB1P42-201ENST00000532126 ZBTB7CA1YPR0 619 aa8.45□□□□□ -1.06
HMGB1P42-201ENST00000532126 PRR29P0C7W0 189 aa8.45□□□□□ -1.06
HMGB1P42-201ENST00000532126 CREBZFQ9NS37 354 aa8.45□□□□□ -1.06
HMGB1P42-201ENST00000532126 CPS1P31327 1500 aa8.44□□□□□ -1.06
HMGB1P42-201ENST00000532126 CLEC11AQ9Y240 323 aa8.44□□□□□ -1.06
HMGB1P42-201ENST00000532126 TBX22Q9Y458 520 aa8.44□□□□□ -1.06
HMGB1P42-201ENST00000532126 RPGRIP1LQ68CZ1 1315 aa8.44□□□□□ -1.06
HMGB1P42-201ENST00000532126 IQSEC2Q5JU85 1478 aa8.44□□□□□ -1.06
HMGB1P42-201ENST00000532126 KCNA6P17658 529 aa8.43□□□□□ -1.06
HMGB1P42-201ENST00000532126 ZC3H15Q8WU90 426 aaKnown RBP8.43□□□□□ -1.06
HMGB1P42-201ENST00000532126 RGL3Q3MIN7 710 aa8.42□□□□□ -1.06
HMGB1P42-201ENST00000532126 RASEFQ8IZ41 740 aa8.42□□□□□ -1.06
HMGB1P42-201ENST00000532126 MYO5BQ9ULV0 1848 aa8.42□□□□□ -1.06
HMGB1P42-201ENST00000532126 ADAMTS13Q76LX8 1427 aa8.41□□□□□ -1.06
HMGB1P42-201ENST00000532126 ANKRD30BQ9BXX2 1392 aa8.41□□□□□ -1.06
HMGB1P42-201ENST00000532126 UBAP1LF5GYI3 381 aa8.41□□□□□ -1.06
HMGB1P42-201ENST00000532126 MNX1P50219 401 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P42-201ENST00000532126 AKT1S1Q96B36 256 aa8.41□□□□□ -1.06
HMGB1P42-201ENST00000532126 NEXMIFQ5QGS0 1516 aa8.4□□□□□ -1.06
HMGB1P42-201ENST00000532126 LRRC7Q96NW7 1537 aa8.4□□□□□ -1.06
HMGB1P42-201ENST00000532126 SPATA31E1Q6ZUB1 1445 aa8.4□□□□□ -1.06
HMGB1P42-201ENST00000532126 PYGBP11216 843 aa8.4□□□□□ -1.06
HMGB1P42-201ENST00000532126 PROSER2Q86WR7 435 aaPredicted RBP8.4□□□□□ -1.06
HMGB1P42-201ENST00000532126 KCNV2Q8TDN2 545 aa8.4□□□□□ -1.06
HMGB1P42-201ENST00000532126 KIF1BO60333 1816 aa8.4□□□□□ -1.07
HMGB1P42-201ENST00000532126 PIK3R4Q99570 1358 aa8.39□□□□□ -1.07
HMGB1P42-201ENST00000532126 TOM1O60784 492 aa8.39□□□□□ -1.07
HMGB1P42-201ENST00000532126 SLC24A3Q9HC58 644 aa8.39□□□□□ -1.07
HMGB1P42-201ENST00000532126 DIP2AQ14689 1571 aa8.39□□□□□ -1.07
HMGB1P42-201ENST00000532126 SETBP1Q9Y6X0 1596 aa8.39□□□□□ -1.07
HMGB1P42-201ENST00000532126 TMEM94Q12767 1356 aa8.38□□□□□ -1.07
HMGB1P42-201ENST00000532126 RBM33Q96EV2 1170 aaKnown RBP8.38□□□□□ -1.07
HMGB1P42-201ENST00000532126 RBM42Q9BTD8 480 aaKnown RBP8.38□□□□□ -1.07
HMGB1P42-201ENST00000532126 AMOTL2Q9Y2J4 779 aa8.38□□□□□ -1.07
HMGB1P42-201ENST00000532126 NKTRP30414 1462 aaKnown RBP8.38□□□□□ -1.07
HMGB1P42-201ENST00000532126 METP08581 1390 aa8.37□□□□□ -1.07
HMGB1P42-201ENST00000532126 ADGRF5Q8IZF2 1346 aa8.37□□□□□ -1.07
HMGB1P42-201ENST00000532126 PDIA4P13667 645 aaKnown RBP8.37□□□□□ -1.07
HMGB1P42-201ENST00000532126 PIP4K2BP78356 416 aa8.37□□□□□ -1.07
HMGB1P42-201ENST00000532126 STRCP1A6NGW2 1772 aa8.37□□□□□ -1.07
HMGB1P42-201ENST00000532126 NWD1Q149M9 1564 aa8.36□□□□□ -1.07
HMGB1P42-201ENST00000532126 NRXN3Q9Y4C0 1643 aa8.36□□□□□ -1.07
HMGB1P42-201ENST00000532126 DCAF11Q8TEB1 546 aa8.35□□□□□ -1.07
HMGB1P42-201ENST00000532126 ARID3AQ99856 593 aa8.35□□□□□ -1.07
HMGB1P42-201ENST00000532126 PTPRUQ92729 1446 aa8.35□□□□□ -1.07
HMGB1P42-201ENST00000532126 MSH6P52701 1360 aa8.35□□□□□ -1.07
HMGB1P42-201ENST00000532126 ALKQ9UM73 1620 aa8.34□□□□□ -1.07
HMGB1P42-201ENST00000532126 STAC3Q96MF2 364 aa8.34□□□□□ -1.07
HMGB1P42-201ENST00000532126 PPLO60437 1756 aa8.34□□□□□ -1.07
HMGB1P42-201ENST00000532126 NCOA3Q9Y6Q9 1424 aa8.34□□□□□ -1.07
HMGB1P42-201ENST00000532126 MYOM2P54296 1465 aa8.33□□□□□ -1.08
HMGB1P42-201ENST00000532126 PIK3C2GO75747 1445 aa8.33□□□□□ -1.08
HMGB1P42-201ENST00000532126 C19orf44Q9H6X5 657 aa8.33□□□□□ -1.08
HMGB1P42-201ENST00000532126 CHD2O14647 1828 aaKnown RBP8.33□□□□□ -1.08
HMGB1P42-201ENST00000532126 DHX57Q6P158 1386 aaKnown RBP8.33□□□□□ -1.08
HMGB1P42-201ENST00000532126 ATF3P18847 181 aa8.32□□□□□ -1.08
HMGB1P42-201ENST00000532126 CFAP70Q5T0N1 1121 aa8.32□□□□□ -1.08
HMGB1P42-201ENST00000532126 TMEM132EQ6IEE7 984 aa8.32□□□□□ -1.08
HMGB1P42-201ENST00000532126 ARHGEF1Q92888 912 aaKnown RBP8.32□□□□□ -1.08
HMGB1P42-201ENST00000532126 C14orf93Q9H972 538 aaKnown RBP8.32□□□□□ -1.08
HMGB1P42-201ENST00000532126 STK26Q9P289 416 aa8.32□□□□□ -1.08
HMGB1P42-201ENST00000532126 NRXN1Q9ULB1 1477 aa8.32□□□□□ -1.08
HMGB1P42-201ENST00000532126 NEUROD1Q13562 356 aa8.31□□□□□ -1.08
HMGB1P42-201ENST00000532126 CADPS2Q86UW7 1296 aa8.31□□□□□ -1.08
HMGB1P42-201ENST00000532126 REM2Q8IYK8 340 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P42-201ENST00000532126 PCGF6Q9BYE7 350 aa8.31□□□□□ -1.08
HMGB1P42-201ENST00000532126 SLAIN2Q9P270 581 aa8.31□□□□□ -1.08
HMGB1P42-201ENST00000532126 ROBO2Q9HCK4 1378 aa8.31□□□□□ -1.08
HMGB1P42-201ENST00000532126 XRN1Q8IZH2 1706 aaKnown RBP8.31□□□□□ -1.08
HMGB1P42-201ENST00000532126 IFT172Q9UG01 1749 aa8.31□□□□□ -1.08
HMGB1P42-201ENST00000532126 PTCH1Q13635 1447 aa8.3□□□□□ -1.08
HMGB1P42-201ENST00000532126 ZNF467Q7Z7K2 595 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P42-201ENST00000532126 SIN3AQ96ST3 1273 aa8.3□□□□□ -1.08
HMGB1P42-201ENST00000532126 LRPPRCP42704 1394 aaKnown RBP8.3□□□□□ -1.08
HMGB1P42-201ENST00000532126 PRAG1Q86YV5 1406 aa8.29□□□□□ -1.08
HMGB1P42-201ENST00000532126 ZMYND10O75800 440 aa8.29□□□□□ -1.08
HMGB1P42-201ENST00000532126 HSPA1LP34931 641 aa8.29□□□□□ -1.08
HMGB1P42-201ENST00000532126 SMYD5Q6GMV2 418 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms