RNA–Protein interactions for RNA: ENST00000527254.5

MS4A6A-207, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-207ENST00000527254 KMT5BQ4FZB7 885 aa10.63□□□□□ -0.71
MS4A6A-207ENST00000527254 SEMA3EO15041 775 aa10.62□□□□□ -0.71
MS4A6A-207ENST00000527254 ADH1BP00325 375 aa10.62□□□□□ -0.71
MS4A6A-207ENST00000527254 RAD54L2Q9Y4B4 1467 aa10.61□□□□□ -0.71
MS4A6A-207ENST00000527254 PRR20EP86478 221 aa10.61□□□□□ -0.71
MS4A6A-207ENST00000527254 PRR20CP86479 221 aa10.61□□□□□ -0.71
MS4A6A-207ENST00000527254 PRR20DP86480 221 aa10.61□□□□□ -0.71
MS4A6A-207ENST00000527254 PRR20BP86481 221 aa10.61□□□□□ -0.71
MS4A6A-207ENST00000527254 PRR20AP86496 221 aa10.61□□□□□ -0.71
MS4A6A-207ENST00000527254 SCUBE3Q8IX30 993 aa10.61□□□□□ -0.71
MS4A6A-207ENST00000527254 WDR97A6NE52 1622 aa10.6□□□□□ -0.71
MS4A6A-207ENST00000527254 FAM187AA6NFU0 413 aa10.6□□□□□ -0.71
MS4A6A-207ENST00000527254 DGAT1O75907 488 aa10.6□□□□□ -0.71
MS4A6A-207ENST00000527254 PXYLP1Q8TE99 480 aa10.6□□□□□ -0.71
MS4A6A-207ENST00000527254 ST8SIA5O15466 376 aa10.59□□□□□ -0.71
MS4A6A-207ENST00000527254 SLC6A16Q9GZN6 736 aa10.59□□□□□ -0.71
MS4A6A-207ENST00000527254 DAXXQ9UER7 740 aaPredicted RBP10.59□□□□□ -0.71
MS4A6A-207ENST00000527254 MAGI1Q96QZ7 1491 aaPredicted RBP10.59□□□□□ -0.71
MS4A6A-207ENST00000527254 GRIN2BQ13224 1484 aa10.58□□□□□ -0.72
MS4A6A-207ENST00000527254 SNAPC4Q5SXM2 1469 aa10.58□□□□□ -0.72
MS4A6A-207ENST00000527254 NR1I2O75469 434 aa10.58□□□□□ -0.72
MS4A6A-207ENST00000527254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.57□□□□□ -0.72
MS4A6A-207ENST00000527254 FCHSD2O94868 740 aa10.57□□□□□ -0.72
MS4A6A-207ENST00000527254 FECHP22830 423 aa10.57□□□□□ -0.72
MS4A6A-207ENST00000527254 CHD1O14646 1710 aa10.57□□□□□ -0.72
MS4A6A-207ENST00000527254 FGD5Q6ZNL6 1462 aa10.56□□□□□ -0.72
MS4A6A-207ENST00000527254 NLRP7Q8WX94 980 aa10.56□□□□□ -0.72
MS4A6A-207ENST00000527254 PKD2L1Q9P0L9 805 aa10.56□□□□□ -0.72
MS4A6A-207ENST00000527254 SYNJ2O15056 1496 aa10.55□□□□□ -0.72
MS4A6A-207ENST00000527254 SYNJ1O43426 1573 aa10.55□□□□□ -0.72
MS4A6A-207ENST00000527254 CLASP1Q7Z460 1538 aa10.54□□□□□ -0.72
MS4A6A-207ENST00000527254 FOXC1Q12948 553 aa10.54□□□□□ -0.72
MS4A6A-207ENST00000527254 METTL3Q86U44 580 aaKnown RBP10.54□□□□□ -0.72
MS4A6A-207ENST00000527254 RBM26Q5T8P6 1007 aaKnown RBP10.53□□□□□ -0.72
MS4A6A-207ENST00000527254 SPSB2Q99619 263 aa10.53□□□□□ -0.72
MS4A6A-207ENST00000527254 AAASQ9NRG9 546 aa10.53□□□□□ -0.72
MS4A6A-207ENST00000527254 DACH1Q9UI36 760 aa10.53□□□□□ -0.72
MS4A6A-207ENST00000527254 KDM2AQ9Y2K7 1162 aa10.53□□□□□ -0.72
MS4A6A-207ENST00000527254 CUX1P39880 1505 aa10.53□□□□□ -0.72
MS4A6A-207ENST00000527254 ARXQ96QS3 562 aa10.52□□□□□ -0.73
MS4A6A-207ENST00000527254 GAPVD1Q14C86 1478 aa10.52□□□□□ -0.73
MS4A6A-207ENST00000527254 OATP04181 439 aa10.51□□□□□ -0.73
MS4A6A-207ENST00000527254 MORN1Q5T089 497 aa10.48□□□□□ -0.73
MS4A6A-207ENST00000527254 FAM160A2Q8N612 972 aaPredicted RBP10.48□□□□□ -0.73
MS4A6A-207ENST00000527254 THAP11Q96EK4 314 aa10.48□□□□□ -0.73
MS4A6A-207ENST00000527254 ABCA10Q8WWZ4 1543 aa10.48□□□□□ -0.73
MS4A6A-207ENST00000527254 GPR37O15354 613 aa10.47□□□□□ -0.73
MS4A6A-207ENST00000527254 FUT2Q10981 343 aa10.47□□□□□ -0.73
MS4A6A-207ENST00000527254 HIC1Q14526 733 aa10.47□□□□□ -0.73
MS4A6A-207ENST00000527254 LCE2AQ5TA79 106 aaPredicted RBP10.47□□□□□ -0.73
MS4A6A-207ENST00000527254 PHOX2BQ99453 314 aa10.47□□□□□ -0.73
MS4A6A-207ENST00000527254 PRDM9Q9NQV7 894 aa10.47□□□□□ -0.73
MS4A6A-207ENST00000527254 TIMELESSQ9UNS1 1208 aa10.47□□□□□ -0.73
MS4A6A-207ENST00000527254 FCF1Q9Y324 198 aaKnown RBP10.47□□□□□ -0.73
MS4A6A-207ENST00000527254 RDH13Q8NBN7 331 aa10.46□□□□□ -0.73
MS4A6A-207ENST00000527254 WRNQ14191 1432 aaPredicted RBP eCLIP10.45□□□□□ -0.74
MS4A6A-207ENST00000527254 DDX11L8A8MPP1 907 aa10.45□□□□□ -0.74
MS4A6A-207ENST00000527254 ERICH6Q7L0X2 663 aa10.45□□□□□ -0.74
MS4A6A-207ENST00000527254 SLC27A5Q9Y2P5 690 aa10.45□□□□□ -0.74
MS4A6A-207ENST00000527254 TOR4AQ9NXH8 423 aa10.44□□□□□ -0.74
MS4A6A-207ENST00000527254 TESPA1A2RU30 521 aaPredicted RBP10.43□□□□□ -0.74
MS4A6A-207ENST00000527254 GNPATO15228 680 aa10.42□□□□□ -0.74
MS4A6A-207ENST00000527254 TREML4Q6UXN2 200 aa10.42□□□□□ -0.74
MS4A6A-207ENST00000527254 RSPH4AQ5TD94 716 aa10.41□□□□□ -0.74
MS4A6A-207ENST00000527254 P3H3Q8IVL6 736 aa10.41□□□□□ -0.74
MS4A6A-207ENST00000527254 GRIN2AQ12879 1464 aa10.41□□□□□ -0.74
MS4A6A-207ENST00000527254 FHAD1B1AJZ9 1412 aa10.41□□□□□ -0.74
MS4A6A-207ENST00000527254 SUPT5HO00267 1087 aaKnown RBP10.4□□□□□ -0.74
MS4A6A-207ENST00000527254 TULP1O00294 542 aaPredicted RBP10.4□□□□□ -0.74
MS4A6A-207ENST00000527254 ATP6V1AP38606 617 aa10.4□□□□□ -0.74
MS4A6A-207ENST00000527254 RPIAP49247 311 aa10.4□□□□□ -0.74
MS4A6A-207ENST00000527254 GMPR2Q9P2T1 348 aaKnown RBP10.4□□□□□ -0.74
MS4A6A-207ENST00000527254 NUP160Q12769 1436 aa10.4□□□□□ -0.75
MS4A6A-207ENST00000527254 ABCA5Q8WWZ7 1642 aa10.4□□□□□ -0.75
MS4A6A-207ENST00000527254 GCGRP47871 477 aa10.39□□□□□ -0.75
MS4A6A-207ENST00000527254 RNF19BQ6ZMZ0 732 aa10.39□□□□□ -0.75
MS4A6A-207ENST00000527254 BRICD5Q6PL45 260 aa10.38□□□□□ -0.75
MS4A6A-207ENST00000527254 PBRM1Q86U86 1689 aa10.38□□□□□ -0.75
MS4A6A-207ENST00000527254 CD2BP2O95400 341 aaKnown RBP10.37□□□□□ -0.75
MS4A6A-207ENST00000527254 FMNL1O95466 1100 aaPredicted RBP10.37□□□□□ -0.75
MS4A6A-207ENST00000527254 AVPP01185 164 aa10.37□□□□□ -0.75
MS4A6A-207ENST00000527254 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
MS4A6A-207ENST00000527254 CRIPAKQ8N1N5 446 aa10.37□□□□□ -0.75
MS4A6A-207ENST00000527254 CYP4X1Q8N118 509 aa10.36□□□□□ -0.75
MS4A6A-207ENST00000527254 GTF3C3Q9Y5Q9 886 aa10.35□□□□□ -0.75
MS4A6A-207ENST00000527254 CEP170Q5SW79 1584 aa10.35□□□□□ -0.75
MS4A6A-207ENST00000527254 ERICH3Q5RHP9 1530 aa10.34□□□□□ -0.75
MS4A6A-207ENST00000527254 AXIN1O15169 862 aa10.34□□□□□ -0.75
MS4A6A-207ENST00000527254 ERCC6L2Q5T890 1561 aa10.33□□□□□ -0.76
MS4A6A-207ENST00000527254 TOP2BQ02880 1626 aa10.33□□□□□ -0.76
MS4A6A-207ENST00000527254 PRG4Q92954 1404 aaPredicted RBP10.33□□□□□ -0.76
MS4A6A-207ENST00000527254 ADAMTS12P58397 1594 aa10.32□□□□□ -0.76
MS4A6A-207ENST00000527254 C11orf95C9JLR9 678 aaPredicted RBP10.32□□□□□ -0.76
MS4A6A-207ENST00000527254 SMPD1P17405 629 aa10.31□□□□□ -0.76
MS4A6A-207ENST00000527254 SALL2Q9Y467 1007 aaPredicted RBP10.31□□□□□ -0.76
MS4A6A-207ENST00000527254 SHROOM2Q13796 1616 aa10.3□□□□□ -0.76
MS4A6A-207ENST00000527254 TTC24A2A3L6 582 aaPredicted RBP10.3□□□□□ -0.76
MS4A6A-207ENST00000527254 FAM69CQ0P6D2 419 aa10.3□□□□□ -0.76
MS4A6A-207ENST00000527254 LCE2CQ5TA81 110 aa10.3□□□□□ -0.76
MS4A6A-207ENST00000527254 HLA-CQ95604 372 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms