RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 PLA2G2CQ5R387 149 aa7.74□□□□□ -1.17
VPS13B-208ENST00000521037 LCE2AQ5TA79 106 aaPredicted RBP7.74□□□□□ -1.17
VPS13B-208ENST00000521037 RBM46Q8TBY0 533 aaKnown RBP7.73□□□□□ -1.17
VPS13B-208ENST00000521037 CCDC88BA6NC98 1476 aa7.73□□□□□ -1.17
VPS13B-208ENST00000521037 ADGRL1O94910 1474 aa7.73□□□□□ -1.17
VPS13B-208ENST00000521037 DIP2BQ9P265 1576 aa7.72□□□□□ -1.17
VPS13B-208ENST00000521037 KCNV2Q8TDN2 545 aa7.72□□□□□ -1.17
VPS13B-208ENST00000521037 CEP170Q5SW79 1584 aa7.71□□□□□ -1.17
VPS13B-208ENST00000521037 SHROOM2Q13796 1616 aa7.71□□□□□ -1.17
VPS13B-208ENST00000521037 ADH1BP00325 375 aa7.71□□□□□ -1.18
VPS13B-208ENST00000521037 CFHP08603 1231 aa7.71□□□□□ -1.18
VPS13B-208ENST00000521037 ZNF697Q5TEC3 545 aa7.71□□□□□ -1.18
VPS13B-208ENST00000521037 WDR97A6NE52 1622 aa7.7□□□□□ -1.18
VPS13B-208ENST00000521037 SOGA1O94964 1423 aa7.7□□□□□ -1.18
VPS13B-208ENST00000521037 PKDCCQ504Y2 493 aa7.7□□□□□ -1.18
VPS13B-208ENST00000521037 SCUBE3Q8IX30 993 aa7.7□□□□□ -1.18
VPS13B-208ENST00000521037 CHMP7Q8WUX9 453 aaPredicted RBP7.7□□□□□ -1.18
VPS13B-208ENST00000521037 RTN4Q9NQC3 1192 aaKnown RBP7.7□□□□□ -1.18
VPS13B-208ENST00000521037 GRIN2BQ13224 1484 aa7.69□□□□□ -1.18
VPS13B-208ENST00000521037 COL17A1Q9UMD9 1497 aaPredicted RBP7.69□□□□□ -1.18
VPS13B-208ENST00000521037 KMT5BQ4FZB7 885 aa7.69□□□□□ -1.18
VPS13B-208ENST00000521037 PXYLP1Q8TE99 480 aa7.69□□□□□ -1.18
VPS13B-208ENST00000521037 PKD2L1Q9P0L9 805 aa7.69□□□□□ -1.18
VPS13B-208ENST00000521037 KDM6BO15054 1643 aa7.69□□□□□ -1.18
VPS13B-208ENST00000521037 NUP160Q12769 1436 aa7.69□□□□□ -1.18
VPS13B-208ENST00000521037 LMTK3Q96Q04 1460 aa7.68□□□□□ -1.18
VPS13B-208ENST00000521037 MAPKBP1O60336 1514 aa7.68□□□□□ -1.18
VPS13B-208ENST00000521037 SOCS7O14512 581 aa7.68□□□□□ -1.18
VPS13B-208ENST00000521037 TSHZ2Q9NRE2 1034 aa7.68□□□□□ -1.18
VPS13B-208ENST00000521037 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.67□□□□□ -1.18
VPS13B-208ENST00000521037 TNFRSF10AO00220 468 aa7.67□□□□□ -1.18
VPS13B-208ENST00000521037 NR1I2O75469 434 aa7.67□□□□□ -1.18
VPS13B-208ENST00000521037 FAM69CQ0P6D2 419 aa7.67□□□□□ -1.18
VPS13B-208ENST00000521037 AAASQ9NRG9 546 aa7.67□□□□□ -1.18
VPS13B-208ENST00000521037 SLC6A16Q9GZN6 736 aa7.66□□□□□ -1.18
VPS13B-208ENST00000521037 FGD5Q6ZNL6 1462 aa7.66□□□□□ -1.18
VPS13B-208ENST00000521037 NUTM2FA1L443 756 aa7.65□□□□□ -1.18
VPS13B-208ENST00000521037 PPRC1Q5VV67 1664 aaKnown RBP7.64□□□□□ -1.19
VPS13B-208ENST00000521037 FAM187AA6NFU0 413 aa7.64□□□□□ -1.19
VPS13B-208ENST00000521037 ST8SIA5O15466 376 aa7.64□□□□□ -1.19
VPS13B-208ENST00000521037 CRIPAKQ8N1N5 446 aa7.64□□□□□ -1.19
VPS13B-208ENST00000521037 THAP11Q96EK4 314 aa7.64□□□□□ -1.19
VPS13B-208ENST00000521037 CUX1P39880 1505 aa7.63□□□□□ -1.19
VPS13B-208ENST00000521037 GRIN2AQ12879 1464 aa7.63□□□□□ -1.19
VPS13B-208ENST00000521037 FCHSD2O94868 740 aa7.63□□□□□ -1.19
VPS13B-208ENST00000521037 AVPP01185 164 aa7.63□□□□□ -1.19
VPS13B-208ENST00000521037 PUS10Q3MIT2 529 aaKnown RBP7.63□□□□□ -1.19
VPS13B-208ENST00000521037 LMOD2Q6P5Q4 547 aa7.63□□□□□ -1.19
VPS13B-208ENST00000521037 TREML4Q6UXN2 200 aa7.63□□□□□ -1.19
VPS13B-208ENST00000521037 TOR4AQ9NXH8 423 aa7.63□□□□□ -1.19
VPS13B-208ENST00000521037 OATP04181 439 aa7.62□□□□□ -1.19
VPS13B-208ENST00000521037 METTL3Q86U44 580 aaKnown RBP7.62□□□□□ -1.19
VPS13B-208ENST00000521037 SPSB2Q99619 263 aa7.62□□□□□ -1.19
VPS13B-208ENST00000521037 DACH1Q9UI36 760 aa7.62□□□□□ -1.19
VPS13B-208ENST00000521037 ABCA5Q8WWZ7 1642 aa7.62□□□□□ -1.19
VPS13B-208ENST00000521037 ADCY10Q96PN6 1610 aa7.62□□□□□ -1.19
VPS13B-208ENST00000521037 PBRM1Q86U86 1689 aa7.61□□□□□ -1.19
VPS13B-208ENST00000521037 SEMA3EO15041 775 aa7.61□□□□□ -1.19
VPS13B-208ENST00000521037 FAM160A2Q8N612 972 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-208ENST00000521037 RPIAP49247 311 aa7.6□□□□□ -1.19
VPS13B-208ENST00000521037 MORN1Q5T089 497 aa7.6□□□□□ -1.19
VPS13B-208ENST00000521037 FECHP22830 423 aa7.59□□□□□ -1.19
VPS13B-208ENST00000521037 GPR37O15354 613 aa7.58□□□□□ -1.2
VPS13B-208ENST00000521037 FOXC1Q12948 553 aa7.58□□□□□ -1.2
VPS13B-208ENST00000521037 HIC1Q14526 733 aa7.58□□□□□ -1.2
VPS13B-208ENST00000521037 DAXXQ9UER7 740 aaPredicted RBP7.57□□□□□ -1.2
VPS13B-208ENST00000521037 SALL2Q9Y467 1007 aaPredicted RBP7.57□□□□□ -1.2
VPS13B-208ENST00000521037 PRG4Q92954 1404 aaPredicted RBP7.57□□□□□ -1.2
VPS13B-208ENST00000521037 ADAMTS12P58397 1594 aa7.57□□□□□ -1.2
VPS13B-208ENST00000521037 ABCA10Q8WWZ4 1543 aa7.57□□□□□ -1.2
VPS13B-208ENST00000521037 SMCPP49901 116 aaPredicted RBP7.56□□□□□ -1.2
VPS13B-208ENST00000521037 FUT2Q10981 343 aa7.56□□□□□ -1.2
VPS13B-208ENST00000521037 BRICD5Q6PL45 260 aa7.55□□□□□ -1.2
VPS13B-208ENST00000521037 PHOX2BQ99453 314 aa7.55□□□□□ -1.2
VPS13B-208ENST00000521037 SLC27A5Q9Y2P5 690 aa7.55□□□□□ -1.2
VPS13B-208ENST00000521037 FCF1Q9Y324 198 aaKnown RBP7.55□□□□□ -1.2
VPS13B-208ENST00000521037 TSPOAP1O95153 1857 aa7.55□□□□□ -1.2
VPS13B-208ENST00000521037 TESPA1A2RU30 521 aaPredicted RBP7.54□□□□□ -1.2
VPS13B-208ENST00000521037 CD2BP2O95400 341 aaKnown RBP7.54□□□□□ -1.2
VPS13B-208ENST00000521037 ATP6V1AP38606 617 aa7.54□□□□□ -1.2
VPS13B-208ENST00000521037 GCGRP47871 477 aa7.54□□□□□ -1.2
VPS13B-208ENST00000521037 RBM26Q5T8P6 1007 aaKnown RBP7.54□□□□□ -1.2
VPS13B-208ENST00000521037 RSPH4AQ5TD94 716 aa7.54□□□□□ -1.2
VPS13B-208ENST00000521037 GMPR2Q9P2T1 348 aaKnown RBP7.54□□□□□ -1.2
VPS13B-208ENST00000521037 GLI2P10070 1586 aa7.53□□□□□ -1.2
VPS13B-208ENST00000521037 NFX1Q12986 1120 aaKnown RBP7.52□□□□□ -1.21
VPS13B-208ENST00000521037 CTC1Q2NKJ3 1217 aa7.52□□□□□ -1.21
VPS13B-208ENST00000521037 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
VPS13B-208ENST00000521037 NLRP7Q8WX94 980 aa7.52□□□□□ -1.21
VPS13B-208ENST00000521037 AXIN1O15169 862 aa7.51□□□□□ -1.21
VPS13B-208ENST00000521037 GNPATO15228 680 aa7.51□□□□□ -1.21
VPS13B-208ENST00000521037 PRDM9Q9NQV7 894 aa7.51□□□□□ -1.21
VPS13B-208ENST00000521037 DISP3Q9P2K9 1392 aa7.5□□□□□ -1.21
VPS13B-208ENST00000521037 FMNL1O95466 1100 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-208ENST00000521037 SMPD1P17405 629 aa7.5□□□□□ -1.21
VPS13B-208ENST00000521037 MSS51Q4VC12 460 aa7.5□□□□□ -1.21
VPS13B-208ENST00000521037 P3H3Q8IVL6 736 aa7.5□□□□□ -1.21
VPS13B-208ENST00000521037 CYP4X1Q8N118 509 aa7.5□□□□□ -1.21
VPS13B-208ENST00000521037 DDX11L8A8MPP1 907 aa7.49□□□□□ -1.21
VPS13B-208ENST00000521037 RNF19BQ6ZMZ0 732 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 263.9 ms