RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 MYOM2P54296 1465 aa10.19□□□□□ -0.78
MRPS28-205ENST00000519386 ADAMTS13Q76LX8 1427 aa10.19□□□□□ -0.78
MRPS28-205ENST00000519386 PRAG1Q86YV5 1406 aa10.19□□□□□ -0.78
MRPS28-205ENST00000519386 ZNF335Q9H4Z2 1342 aaPredicted RBP10.19□□□□□ -0.78
MRPS28-205ENST00000519386 SETBP1Q9Y6X0 1596 aa10.18□□□□□ -0.78
MRPS28-205ENST00000519386 GPRASP1Q5JY77 1395 aa10.18□□□□□ -0.78
MRPS28-205ENST00000519386 VGFO15240 615 aaPredicted RBP10.18□□□□□ -0.78
MRPS28-205ENST00000519386 PLCD3Q8N3E9 789 aa10.18□□□□□ -0.78
MRPS28-205ENST00000519386 STRCP1A6NGW2 1772 aa10.17□□□□□ -0.78
MRPS28-205ENST00000519386 ADGRF5Q8IZF2 1346 aa10.17□□□□□ -0.78
MRPS28-205ENST00000519386 LTBP4Q8N2S1 1624 aa10.17□□□□□ -0.78
MRPS28-205ENST00000519386 DIP2AQ14689 1571 aa10.17□□□□□ -0.78
MRPS28-205ENST00000519386 PLEKHG5O94827 1062 aa10.16□□□□□ -0.78
MRPS28-205ENST00000519386 EIF4G2P78344 907 aaKnown RBP eCLIP10.16□□□□□ -0.78
MRPS28-205ENST00000519386 DCAF11Q8TEB1 546 aa10.16□□□□□ -0.78
MRPS28-205ENST00000519386 KDM2AQ9Y2K7 1162 aa10.15□□□□□ -0.78
MRPS28-205ENST00000519386 TBX22Q9Y458 520 aa10.15□□□□□ -0.78
MRPS28-205ENST00000519386 SETD1AO15047 1707 aaKnown RBP10.15□□□□□ -0.78
MRPS28-205ENST00000519386 NRXN1Q9ULB1 1477 aa10.15□□□□□ -0.78
MRPS28-205ENST00000519386 PIK3C2GO75747 1445 aa10.15□□□□□ -0.79
MRPS28-205ENST00000519386 ALKQ9UM73 1620 aa10.15□□□□□ -0.79
MRPS28-205ENST00000519386 CHD2O14647 1828 aaKnown RBP10.14□□□□□ -0.79
MRPS28-205ENST00000519386 NWD1Q149M9 1564 aa10.14□□□□□ -0.79
MRPS28-205ENST00000519386 METP08581 1390 aa10.14□□□□□ -0.79
MRPS28-205ENST00000519386 CPS1P31327 1500 aa10.13□□□□□ -0.79
MRPS28-205ENST00000519386 VASPP50552 380 aaPredicted RBP10.13□□□□□ -0.79
MRPS28-205ENST00000519386 NBPF8Q3BBV2 869 aa10.13□□□□□ -0.79
MRPS28-205ENST00000519386 PTPRUQ92729 1446 aa10.13□□□□□ -0.79
MRPS28-205ENST00000519386 USP47Q96K76 1375 aa10.13□□□□□ -0.79
MRPS28-205ENST00000519386 KCNA6P17658 529 aa10.12□□□□□ -0.79
MRPS28-205ENST00000519386 CERKQ8TCT0 537 aa10.12□□□□□ -0.79
MRPS28-205ENST00000519386 PIK3R4Q99570 1358 aa10.12□□□□□ -0.79
MRPS28-205ENST00000519386 ASXL1Q8IXJ9 1541 aa10.12□□□□□ -0.79
MRPS28-205ENST00000519386 XRN1Q8IZH2 1706 aaKnown RBP10.11□□□□□ -0.79
MRPS28-205ENST00000519386 LRRC7Q96NW7 1537 aa10.11□□□□□ -0.79
MRPS28-205ENST00000519386 NKTRP30414 1462 aaKnown RBP10.1□□□□□ -0.79
MRPS28-205ENST00000519386 HSPA5P11021 654 aaKnown RBP10.1□□□□□ -0.79
MRPS28-205ENST00000519386 CFAP70Q5T0N1 1121 aa10.1□□□□□ -0.79
MRPS28-205ENST00000519386 AMOTL2Q9Y2J4 779 aa10.1□□□□□ -0.79
MRPS28-205ENST00000519386 XIRP1Q702N8 1843 aaKnown RBP10.1□□□□□ -0.79
MRPS28-205ENST00000519386 ZNF579Q8NAF0 562 aaKnown RBP10.09□□□□□ -0.79
MRPS28-205ENST00000519386 C14orf93Q9H972 538 aaKnown RBP10.09□□□□□ -0.79
MRPS28-205ENST00000519386 ZBTB47Q9UFB7 747 aaPredicted RBP10.09□□□□□ -0.79
MRPS28-205ENST00000519386 ZRANB1Q9UGI0 708 aa10.09□□□□□ -0.79
MRPS28-205ENST00000519386 ROCK2O75116 1388 aaKnown RBP10.09□□□□□ -0.79
MRPS28-205ENST00000519386 CCDC7Q96M83 1385 aa10.09□□□□□ -0.79
MRPS28-205ENST00000519386 TMEM132EQ6IEE7 984 aa10.08□□□□□ -0.8
MRPS28-205ENST00000519386 PROSER2Q86WR7 435 aaPredicted RBP10.08□□□□□ -0.8
MRPS28-205ENST00000519386 RBM33Q96EV2 1170 aaKnown RBP10.08□□□□□ -0.8
MRPS28-205ENST00000519386 TMEM94Q12767 1356 aa10.08□□□□□ -0.8
MRPS28-205ENST00000519386 ADGRB1O14514 1584 aa10.07□□□□□ -0.8
MRPS28-205ENST00000519386 WASHC2AQ641Q2 1341 aa10.07□□□□□ -0.8
MRPS28-205ENST00000519386 IQSEC2Q5JU85 1478 aa10.06□□□□□ -0.8
MRPS28-205ENST00000519386 LRPPRCP42704 1394 aaKnown RBP10.06□□□□□ -0.8
MRPS28-205ENST00000519386 GABBR2O75899 941 aa10.06□□□□□ -0.8
MRPS28-205ENST00000519386 STK26Q9P289 416 aa10.06□□□□□ -0.8
MRPS28-205ENST00000519386 KNDC1Q76NI1 1749 aa10.06□□□□□ -0.8
MRPS28-205ENST00000519386 PTCH1Q13635 1447 aa10.06□□□□□ -0.8
MRPS28-205ENST00000519386 YTHDC2Q9H6S0 1430 aaKnown RBP10.06□□□□□ -0.8
MRPS28-205ENST00000519386 ROBO2Q9HCK4 1378 aa10.05□□□□□ -0.8
MRPS28-205ENST00000519386 PAK3O75914 559 aaPredicted RBP10.05□□□□□ -0.8
MRPS28-205ENST00000519386 TECPR2O15040 1411 aa10.05□□□□□ -0.8
MRPS28-205ENST00000519386 EIF3AQ14152 1382 aaKnown RBP10.04□□□□□ -0.8
MRPS28-205ENST00000519386 ABCC11Q96J66 1382 aa10.04□□□□□ -0.8
MRPS28-205ENST00000519386 NBPF1Q3BBV0 1214 aa10.04□□□□□ -0.8
MRPS28-205ENST00000519386 RASEFQ8IZ41 740 aa10.04□□□□□ -0.8
MRPS28-205ENST00000519386 CARD11Q9BXL7 1154 aa10.04□□□□□ -0.8
MRPS28-205ENST00000519386 NUBP1P53384 320 aa10.03□□□□□ -0.8
MRPS28-205ENST00000519386 C14orf37Q86TY3 774 aa10.03□□□□□ -0.8
MRPS28-205ENST00000519386 KIF7Q2M1P5 1343 aa10.03□□□□□ -0.8
MRPS28-205ENST00000519386 PLEKHH1Q9ULM0 1364 aa10.02□□□□□ -0.8
MRPS28-205ENST00000519386 SBNO2Q9Y2G9 1366 aa10.02□□□□□ -0.8
MRPS28-205ENST00000519386 NALCNQ8IZF0 1738 aa10.02□□□□□ -0.8
MRPS28-205ENST00000519386 ARHGEF28Q8N1W1 1705 aaKnown RBP10.02□□□□□ -0.8
MRPS28-205ENST00000519386 NCOA3Q9Y6Q9 1424 aa10.02□□□□□ -0.81
MRPS28-205ENST00000519386 CCER2I3L3R5 266 aa10.02□□□□□ -0.81
MRPS28-205ENST00000519386 DDX10Q13206 875 aaKnown RBP10.02□□□□□ -0.81
MRPS28-205ENST00000519386 MYOM1P52179 1685 aa10.02□□□□□ -0.81
MRPS28-205ENST00000519386 DLC1Q96QB1 1528 aa10.02□□□□□ -0.81
MRPS28-205ENST00000519386 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.02□□□□□ -0.81
MRPS28-205ENST00000519386 MSH6P52701 1360 aa10.01□□□□□ -0.81
MRPS28-205ENST00000519386 FAM135BQ49AJ0 1406 aa10.01□□□□□ -0.81
MRPS28-205ENST00000519386 ADGRL3Q9HAR2 1447 aa10.01□□□□□ -0.81
MRPS28-205ENST00000519386 UBAP1LF5GYI3 381 aa10.01□□□□□ -0.81
MRPS28-205ENST00000519386 CLCN6P51797 869 aa10.01□□□□□ -0.81
MRPS28-205ENST00000519386 WAPLQ7Z5K2 1190 aa10.01□□□□□ -0.81
MRPS28-205ENST00000519386 TSPYL2Q9H2G4 693 aaPredicted RBP10.01□□□□□ -0.81
MRPS28-205ENST00000519386 TRAK1Q9UPV9 953 aa10.01□□□□□ -0.81
MRPS28-205ENST00000519386 QRICH2Q9H0J4 1663 aa10.01□□□□□ -0.81
MRPS28-205ENST00000519386 SLC24A1O60721 1099 aa10□□□□□ -0.81
MRPS28-205ENST00000519386 CENPBP07199 599 aaPredicted RBP10□□□□□ -0.81
MRPS28-205ENST00000519386 PRAM1Q96QH2 718 aa10□□□□□ -0.81
MRPS28-205ENST00000519386 PHF12Q96QT6 1004 aa10□□□□□ -0.81
MRPS28-205ENST00000519386 KTN1Q86UP2 1357 aaKnown RBP10□□□□□ -0.81
MRPS28-205ENST00000519386 ANP32CO43423 234 aa9.99□□□□□ -0.81
MRPS28-205ENST00000519386 TOM1O60784 492 aa9.99□□□□□ -0.81
MRPS28-205ENST00000519386 SAFB2Q14151 953 aaKnown RBP eCLIP9.99□□□□□ -0.81
MRPS28-205ENST00000519386 FBXO41Q8TF61 875 aa9.99□□□□□ -0.81
MRPS28-205ENST00000519386 SIRT1Q96EB6 747 aa9.99□□□□□ -0.81
MRPS28-205ENST00000519386 C19orf44Q9H6X5 657 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms