RNA–Protein interactions for RNA: ENST00000518170.1

EFCAB13-205, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 355 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-205ENST00000518170 KDM5BQ9UGL1 1544 aa11.5□□□□□ -0.57
EFCAB13-205ENST00000518170 RCCD1A6NED2 376 aa11.49□□□□□ -0.57
EFCAB13-205ENST00000518170 RNF40O75150 1001 aa11.49□□□□□ -0.57
EFCAB13-205ENST00000518170 DNAJB2P25686 324 aa11.49□□□□□ -0.57
EFCAB13-205ENST00000518170 HNRNPUQ00839 825 aaKnown RBP eCLIP11.49□□□□□ -0.57
EFCAB13-205ENST00000518170 SWT1Q5T5J6 900 aaKnown RBP11.49□□□□□ -0.57
EFCAB13-205ENST00000518170 ZC3H15Q8WU90 426 aaKnown RBP11.49□□□□□ -0.57
EFCAB13-205ENST00000518170 HPS5Q9UPZ3 1129 aa11.49□□□□□ -0.57
EFCAB13-205ENST00000518170 NOP58Q9Y2X3 529 aaKnown RBP11.49□□□□□ -0.57
EFCAB13-205ENST00000518170 HFM1A2PYH4 1435 aa11.49□□□□□ -0.57
EFCAB13-205ENST00000518170 PXYLP1Q8TE99 480 aa11.48□□□□□ -0.57
EFCAB13-205ENST00000518170 CNTLNQ9NXG0 1405 aa11.48□□□□□ -0.57
EFCAB13-205ENST00000518170 CFTRP13569 1480 aa11.48□□□□□ -0.57
EFCAB13-205ENST00000518170 HECW1Q76N89 1606 aa11.47□□□□□ -0.57
EFCAB13-205ENST00000518170 ABCA5Q8WWZ7 1642 aa11.47□□□□□ -0.57
EFCAB13-205ENST00000518170 CASKIN1Q8WXD9 1431 aa11.47□□□□□ -0.57
EFCAB13-205ENST00000518170 PPP4CP60510 307 aa11.47□□□□□ -0.57
EFCAB13-205ENST00000518170 METTL3Q86U44 580 aaKnown RBP11.47□□□□□ -0.57
EFCAB13-205ENST00000518170 KRI1Q8N9T8 703 aaKnown RBP11.47□□□□□ -0.57
EFCAB13-205ENST00000518170 TSR3Q9UJK0 312 aaKnown RBP11.47□□□□□ -0.57
EFCAB13-205ENST00000518170 POLR1AO95602 1720 aaPredicted RBP11.46□□□□□ -0.57
EFCAB13-205ENST00000518170 FGD5Q6ZNL6 1462 aa11.46□□□□□ -0.57
EFCAB13-205ENST00000518170 MAP2K5Q13163 448 aa11.46□□□□□ -0.57
EFCAB13-205ENST00000518170 WBP1LQ9NX94 342 aa11.46□□□□□ -0.57
EFCAB13-205ENST00000518170 NCAPD3P42695 1498 aa11.45□□□□□ -0.58
EFCAB13-205ENST00000518170 FGD6Q6ZV73 1430 aa11.45□□□□□ -0.58
EFCAB13-205ENST00000518170 MINK1Q8N4C8 1332 aaPredicted RBP11.45□□□□□ -0.58
EFCAB13-205ENST00000518170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.45□□□□□ -0.58
EFCAB13-205ENST00000518170 IRF6O14896 467 aa11.45□□□□□ -0.58
EFCAB13-205ENST00000518170 SLC4A3P48751 1232 aa11.45□□□□□ -0.58
EFCAB13-205ENST00000518170 IGF1RP08069 1367 aa11.44□□□□□ -0.58
EFCAB13-205ENST00000518170 ZBED9Q6R2W3 1325 aa11.44□□□□□ -0.58
EFCAB13-205ENST00000518170 GCC2Q8IWJ2 1684 aa11.44□□□□□ -0.58
EFCAB13-205ENST00000518170 FAM50AQ14320 339 aaKnown RBP11.44□□□□□ -0.58
EFCAB13-205ENST00000518170 TMEM134Q9H6X4 195 aa11.44□□□□□ -0.58
EFCAB13-205ENST00000518170 THOC2Q8NI27 1593 aaKnown RBP11.44□□□□□ -0.58
EFCAB13-205ENST00000518170 ZMYND10O75800 440 aa11.43□□□□□ -0.58
EFCAB13-205ENST00000518170 SLF2Q8IX21 1173 aa11.43□□□□□ -0.58
EFCAB13-205ENST00000518170 CARMIL1Q5VZK9 1371 aa11.42□□□□□ -0.58
EFCAB13-205ENST00000518170 BARGINQ6ZT62 677 aa11.42□□□□□ -0.58
EFCAB13-205ENST00000518170 NYAP1Q6ZVC0 841 aa11.42□□□□□ -0.58
EFCAB13-205ENST00000518170 NLRP7Q8WX94 980 aa11.42□□□□□ -0.58
EFCAB13-205ENST00000518170 CTTNBP2Q8WZ74 1663 aa11.42□□□□□ -0.58
EFCAB13-205ENST00000518170 AKNAQ7Z591 1439 aa11.42□□□□□ -0.58
EFCAB13-205ENST00000518170 CC2D2AQ9P2K1 1620 aa11.4□□□□□ -0.58
EFCAB13-205ENST00000518170 PHOX2BQ99453 314 aa11.4□□□□□ -0.58
EFCAB13-205ENST00000518170 FMN1Q68DA7 1419 aa11.4□□□□□ -0.58
EFCAB13-205ENST00000518170 SMG6Q86US8 1419 aaKnown RBP11.4□□□□□ -0.58
EFCAB13-205ENST00000518170 CUL7Q14999 1698 aa11.4□□□□□ -0.59
EFCAB13-205ENST00000518170 KIF21AQ7Z4S6 1674 aa11.4□□□□□ -0.59
EFCAB13-205ENST00000518170 NCOA1Q15788 1441 aa11.39□□□□□ -0.59
EFCAB13-205ENST00000518170 CCDC102AQ96A19 550 aa11.39□□□□□ -0.59
EFCAB13-205ENST00000518170 NAIPQ13075 1403 aa11.38□□□□□ -0.59
EFCAB13-205ENST00000518170 ANP32AP39687 249 aaKnown RBP11.38□□□□□ -0.59
EFCAB13-205ENST00000518170 RTL5Q5HYW3 569 aaPredicted RBP11.38□□□□□ -0.59
EFCAB13-205ENST00000518170 EHBP1L1Q8N3D4 1523 aa11.38□□□□□ -0.59
EFCAB13-205ENST00000518170 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
EFCAB13-205ENST00000518170 IRX6P78412 446 aaPredicted RBP11.37□□□□□ -0.59
EFCAB13-205ENST00000518170 IFFO2Q5TF58 517 aa11.37□□□□□ -0.59
EFCAB13-205ENST00000518170 NECTIN2Q92692 538 aa11.37□□□□□ -0.59
EFCAB13-205ENST00000518170 WASHC2AQ641Q2 1341 aa11.36□□□□□ -0.59
EFCAB13-205ENST00000518170 IPO9Q96P70 1041 aaKnown RBP11.36□□□□□ -0.59
EFCAB13-205ENST00000518170 HIRIP3Q9BW71 556 aaPredicted RBP11.36□□□□□ -0.59
EFCAB13-205ENST00000518170 DAXXQ9UER7 740 aaPredicted RBP11.36□□□□□ -0.59
EFCAB13-205ENST00000518170 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
EFCAB13-205ENST00000518170 SNAPC4Q5SXM2 1469 aa11.35□□□□□ -0.59
EFCAB13-205ENST00000518170 MYOM3Q5VTT5 1437 aa11.35□□□□□ -0.59
EFCAB13-205ENST00000518170 TCOF1Q13428 1488 aaKnown RBP11.34□□□□□ -0.59
EFCAB13-205ENST00000518170 CCDC7Q96M83 1385 aa11.34□□□□□ -0.59
EFCAB13-205ENST00000518170 HSPA5P11021 654 aaKnown RBP11.34□□□□□ -0.59
EFCAB13-205ENST00000518170 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
EFCAB13-205ENST00000518170 RSPH4AQ5TD94 716 aa11.33□□□□□ -0.6
EFCAB13-205ENST00000518170 B4GALNT3Q6L9W6 998 aa11.33□□□□□ -0.6
EFCAB13-205ENST00000518170 ARHGEF11O15085 1522 aa11.32□□□□□ -0.6
EFCAB13-205ENST00000518170 DDX11L8A8MPP1 907 aa11.32□□□□□ -0.6
EFCAB13-205ENST00000518170 APLP1P51693 650 aa11.32□□□□□ -0.6
EFCAB13-205ENST00000518170 MDM2Q00987 491 aaPredicted RBP11.32□□□□□ -0.6
EFCAB13-205ENST00000518170 PRKRIP1Q9H875 184 aaPredicted RBP11.32□□□□□ -0.6
EFCAB13-205ENST00000518170 USP35Q9P2H5 1018 aa11.32□□□□□ -0.6
EFCAB13-205ENST00000518170 PTPRKQ15262 1439 aa11.32□□□□□ -0.6
EFCAB13-205ENST00000518170 FHOD3Q2V2M9 1422 aa11.32□□□□□ -0.6
EFCAB13-205ENST00000518170 SAMD9Q5K651 1589 aa11.32□□□□□ -0.6
EFCAB13-205ENST00000518170 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
EFCAB13-205ENST00000518170 SLC10A3P09131 477 aa11.31□□□□□ -0.6
EFCAB13-205ENST00000518170 RDH13Q8NBN7 331 aa11.31□□□□□ -0.6
EFCAB13-205ENST00000518170 UGGT2Q9NYU1 1516 aa11.3□□□□□ -0.6
EFCAB13-205ENST00000518170 AK7Q96M32 723 aa11.29□□□□□ -0.6
EFCAB13-205ENST00000518170 MTUS2Q5JR59 1369 aa11.28□□□□□ -0.6
EFCAB13-205ENST00000518170 GRIN2BQ13224 1484 aa11.28□□□□□ -0.6
EFCAB13-205ENST00000518170 C11orf95C9JLR9 678 aaPredicted RBP11.28□□□□□ -0.6
EFCAB13-205ENST00000518170 CFHP08603 1231 aa11.28□□□□□ -0.6
EFCAB13-205ENST00000518170 KMT5BQ4FZB7 885 aa11.28□□□□□ -0.6
EFCAB13-205ENST00000518170 SULF1Q8IWU6 871 aa11.28□□□□□ -0.6
EFCAB13-205ENST00000518170 PRR14Q9BWN1 585 aa11.28□□□□□ -0.6
EFCAB13-205ENST00000518170 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
EFCAB13-205ENST00000518170 MRS2Q9HD23 443 aa11.28□□□□□ -0.6
EFCAB13-205ENST00000518170 NUDCQ9Y266 331 aa11.28□□□□□ -0.6
EFCAB13-205ENST00000518170 LRRIQ1Q96JM4 1722 aa11.28□□□□□ -0.6
EFCAB13-205ENST00000518170 ABCA10Q8WWZ4 1543 aa11.28□□□□□ -0.6
EFCAB13-205ENST00000518170 MIA2Q96PC5 1412 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms