RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 SCUBE3Q8IX30 993 aa3.15□□□□□ -1.91
RNU6-557P-201ENST00000516842 SPSB2Q99619 263 aa3.15□□□□□ -1.91
RNU6-557P-201ENST00000516842 DPYSL4O14531 572 aa3.14□□□□□ -1.91
RNU6-557P-201ENST00000516842 CAPN5O15484 640 aaPredicted RBP3.14□□□□□ -1.91
RNU6-557P-201ENST00000516842 ACTN4O43707 911 aaKnown RBP3.14□□□□□ -1.91
RNU6-557P-201ENST00000516842 PUS10Q3MIT2 529 aaKnown RBP3.14□□□□□ -1.91
RNU6-557P-201ENST00000516842 DCAF5Q96JK2 942 aa3.14□□□□□ -1.91
RNU6-557P-201ENST00000516842 CDHR5Q9HBB8 845 aa3.14□□□□□ -1.91
RNU6-557P-201ENST00000516842 GOLGA2P5Q9HBQ8 144 aa3.14□□□□□ -1.91
RNU6-557P-201ENST00000516842 PPFIA3O75145 1194 aa3.13□□□□□ -1.91
RNU6-557P-201ENST00000516842 NR1I2O75469 434 aa3.13□□□□□ -1.91
RNU6-557P-201ENST00000516842 PRDM9Q9NQV7 894 aa3.13□□□□□ -1.91
RNU6-557P-201ENST00000516842 ALDH1A1P00352 501 aa3.12□□□□□ -1.91
RNU6-557P-201ENST00000516842 CFHP08603 1231 aa3.12□□□□□ -1.91
RNU6-557P-201ENST00000516842 BAG6P46379 1132 aa3.12□□□□□ -1.91
RNU6-557P-201ENST00000516842 RNFT1Q5M7Z0 435 aa3.12□□□□□ -1.91
RNU6-557P-201ENST00000516842 ITGB7P26010 798 aa3.11□□□□□ -1.91
RNU6-557P-201ENST00000516842 TRIM32Q13049 653 aa3.11□□□□□ -1.91
RNU6-557P-201ENST00000516842 SCARF2Q96GP6 870 aaPredicted RBP3.11□□□□□ -1.91
RNU6-557P-201ENST00000516842 COL25A1Q9BXS0 654 aaPredicted RBP3.11□□□□□ -1.91
RNU6-557P-201ENST00000516842 ZBTB24O43167 697 aaPredicted RBP3.1□□□□□ -1.91
RNU6-557P-201ENST00000516842 SLC4A3P48751 1232 aa3.1□□□□□ -1.91
RNU6-557P-201ENST00000516842 MFSD10Q14728 455 aa3.1□□□□□ -1.91
RNU6-557P-201ENST00000516842 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
RNU6-557P-201ENST00000516842 FAM160A2Q8N612 972 aaPredicted RBP3.1□□□□□ -1.91
RNU6-557P-201ENST00000516842 PURBQ96QR8 312 aaKnown RBP3.1□□□□□ -1.91
RNU6-557P-201ENST00000516842 EYA1Q99502 592 aa3.1□□□□□ -1.91
RNU6-557P-201ENST00000516842 ECM2O94769 699 aaPredicted RBP3.09□□□□□ -1.91
RNU6-557P-201ENST00000516842 KMT5BQ4FZB7 885 aa3.09□□□□□ -1.91
RNU6-557P-201ENST00000516842 RC3H1Q5TC82 1133 aaKnown RBP3.09□□□□□ -1.91
RNU6-557P-201ENST00000516842 PADI6Q6TGC4 694 aa3.09□□□□□ -1.91
RNU6-557P-201ENST00000516842 CNTNAP5Q8WYK1 1306 aa3.09□□□□□ -1.91
RNU6-557P-201ENST00000516842 COBLO75128 1261 aa3.08□□□□□ -1.92
RNU6-557P-201ENST00000516842 SLC10A3P09131 477 aa3.08□□□□□ -1.92
RNU6-557P-201ENST00000516842 SKOR1P84550 965 aa3.08□□□□□ -1.92
RNU6-557P-201ENST00000516842 CERKQ8TCT0 537 aa3.08□□□□□ -1.92
RNU6-557P-201ENST00000516842 NKX1-1Q15270 411 aaPredicted RBP3.06□□□□□ -1.92
RNU6-557P-201ENST00000516842 ZMYM1Q5SVZ6 1142 aa3.06□□□□□ -1.92
RNU6-557P-201ENST00000516842 MRPL14Q6P1L8 145 aaKnown RBP3.06□□□□□ -1.92
RNU6-557P-201ENST00000516842 LYPD4Q6UWN0 246 aa3.06□□□□□ -1.92
RNU6-557P-201ENST00000516842 TTC13Q8NBP0 860 aa3.06□□□□□ -1.92
RNU6-557P-201ENST00000516842 MAN1A2O60476 641 aa3.05□□□□□ -1.92
RNU6-557P-201ENST00000516842 SLURP2P0DP57 97 aa3.05□□□□□ -1.92
RNU6-557P-201ENST00000516842 THAP11Q96EK4 314 aa3.05□□□□□ -1.92
RNU6-557P-201ENST00000516842 REPIN1Q9BWE0 567 aaKnown RBP3.05□□□□□ -1.92
RNU6-557P-201ENST00000516842 FECHP22830 423 aa3.04□□□□□ -1.92
RNU6-557P-201ENST00000516842 LAMC2Q13753 1193 aa3.04□□□□□ -1.92
RNU6-557P-201ENST00000516842 FOXD4L6Q3SYB3 417 aaPredicted RBP3.04□□□□□ -1.92
RNU6-557P-201ENST00000516842 FOXD4L3Q6VB84 417 aaPredicted RBP3.04□□□□□ -1.92
RNU6-557P-201ENST00000516842 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
RNU6-557P-201ENST00000516842 KRTAP4-5Q9BYR2 181 aa3.04□□□□□ -1.92
RNU6-557P-201ENST00000516842 SCO2A0A1W2PP80 73 aa3.03□□□□□ -1.92
RNU6-557P-201ENST00000516842 KRBA1A5PL33 1030 aa3.03□□□□□ -1.92
RNU6-557P-201ENST00000516842 GRXCR2A6NFK2 248 aa3.03□□□□□ -1.92
RNU6-557P-201ENST00000516842 SIAH2O43255 324 aa3.03□□□□□ -1.92
RNU6-557P-201ENST00000516842 SCARF1Q14162 830 aa3.03□□□□□ -1.92
RNU6-557P-201ENST00000516842 TMEM134Q9H6X4 195 aa3.03□□□□□ -1.92
RNU6-557P-201ENST00000516842 NPDC1Q9NQX5 325 aaPredicted RBP3.03□□□□□ -1.92
RNU6-557P-201ENST00000516842 RBM27Q9P2N5 1060 aaKnown RBP3.03□□□□□ -1.92
RNU6-557P-201ENST00000516842 WASF2Q9Y6W5 498 aa3.03□□□□□ -1.92
RNU6-557P-201ENST00000516842 C6orf118Q5T5N4 469 aa3.02□□□□□ -1.93
RNU6-557P-201ENST00000516842 KRTAP9-8Q9BYQ0 159 aa3.02□□□□□ -1.93
RNU6-557P-201ENST00000516842 DNAJB2P25686 324 aa3.01□□□□□ -1.93
RNU6-557P-201ENST00000516842 CAMK2BQ13554 666 aa3.01□□□□□ -1.93
RNU6-557P-201ENST00000516842 FAM161AQ3B820 660 aa3.01□□□□□ -1.93
RNU6-557P-201ENST00000516842 CADPS2Q86UW7 1296 aa3.01□□□□□ -1.93
RNU6-557P-201ENST00000516842 SEMA6BQ9H3T3 888 aa3.01□□□□□ -1.93
RNU6-557P-201ENST00000516842 SLC27A5Q9Y2P5 690 aa3.01□□□□□ -1.93
RNU6-557P-201ENST00000516842 ADAMTS2O95450 1211 aa3□□□□□ -1.93
RNU6-557P-201ENST00000516842 CELA2BP08218 269 aaPredicted RBP3□□□□□ -1.93
RNU6-557P-201ENST00000516842 MORN1Q5T089 497 aa3□□□□□ -1.93
RNU6-557P-201ENST00000516842 HS6ST3Q8IZP7 471 aa3□□□□□ -1.93
RNU6-557P-201ENST00000516842 DNMT3LQ9UJW3 386 aa3□□□□□ -1.93
RNU6-557P-201ENST00000516842 ARID1BQ8NFD5 2236 aaPredicted RBP3□□□□□ -1.93
RNU6-557P-201ENST00000516842 RCCD1A6NED2 376 aa2.99□□□□□ -1.93
RNU6-557P-201ENST00000516842 PHF20L1A8MW92 1017 aa2.99□□□□□ -1.93
RNU6-557P-201ENST00000516842 FMNL1O95466 1100 aaPredicted RBP2.99□□□□□ -1.93
RNU6-557P-201ENST00000516842 OSBPP22059 807 aa2.99□□□□□ -1.93
RNU6-557P-201ENST00000516842 MAP3K10Q02779 954 aa2.99□□□□□ -1.93
RNU6-557P-201ENST00000516842 PKD2Q13563 968 aa2.99□□□□□ -1.93
RNU6-557P-201ENST00000516842 RNF19BQ6ZMZ0 732 aa2.99□□□□□ -1.93
RNU6-557P-201ENST00000516842 VWA5B2Q8N398 1253 aa2.99□□□□□ -1.93
RNU6-557P-201ENST00000516842 CCDC24Q8N4L8 307 aa2.99□□□□□ -1.93
RNU6-557P-201ENST00000516842 TIMP2P16035 220 aa2.98□□□□□ -1.93
RNU6-557P-201ENST00000516842 PDIA6Q15084 440 aa2.98□□□□□ -1.93
RNU6-557P-201ENST00000516842 BRICD5Q6PL45 260 aa2.98□□□□□ -1.93
RNU6-557P-201ENST00000516842 SH3RF1Q7Z6J0 888 aa2.98□□□□□ -1.93
RNU6-557P-201ENST00000516842 BEND7Q8N7W2 519 aaPredicted RBP2.98□□□□□ -1.93
RNU6-557P-201ENST00000516842 EHBP1Q8NDI1 1231 aa2.98□□□□□ -1.93
RNU6-557P-201ENST00000516842 TLL2Q9Y6L7 1015 aa2.98□□□□□ -1.93
RNU6-557P-201ENST00000516842 CDC14CA4D256 554 aa2.97□□□□□ -1.93
RNU6-557P-201ENST00000516842 WNT7BP56706 349 aa2.97□□□□□ -1.93
RNU6-557P-201ENST00000516842 WDR4P57081 412 aaKnown RBP2.97□□□□□ -1.93
RNU6-557P-201ENST00000516842 PTSQ03393 145 aa2.97□□□□□ -1.93
RNU6-557P-201ENST00000516842 FUT2Q10981 343 aa2.97□□□□□ -1.93
RNU6-557P-201ENST00000516842 ZFP64Q9NPA5 681 aa2.97□□□□□ -1.93
RNU6-557P-201ENST00000516842 CHGAP10645 457 aaKnown RBP2.96□□□□□ -1.94
RNU6-557P-201ENST00000516842 NNTQ13423 1086 aa2.96□□□□□ -1.94
RNU6-557P-201ENST00000516842 DOC2BQ14184 412 aa2.96□□□□□ -1.94
RNU6-557P-201ENST00000516842 NANOS1Q8WY41 292 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms