RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 DIP2AQ14689 1571 aa8.07□□□□□ -1.12
RN7SKP288-201ENST00000516227 PER1O15534 1290 aaPredicted RBP8.07□□□□□ -1.12
RN7SKP288-201ENST00000516227 EID1Q9Y6B2 187 aa8.07□□□□□ -1.12
RN7SKP288-201ENST00000516227 SLIT1O75093 1534 aa8.07□□□□□ -1.12
RN7SKP288-201ENST00000516227 BRD4O60885 1362 aaPredicted RBP8.07□□□□□ -1.12
RN7SKP288-201ENST00000516227 PARD3Q8TEW0 1356 aa8.07□□□□□ -1.12
RN7SKP288-201ENST00000516227 TMEM2Q9UHN6 1383 aa8.07□□□□□ -1.12
RN7SKP288-201ENST00000516227 SCAF1Q9H7N4 1312 aaKnown RBP8.06□□□□□ -1.12
RN7SKP288-201ENST00000516227 SRPK2P78362 688 aaKnown RBP8.06□□□□□ -1.12
RN7SKP288-201ENST00000516227 TXNDC2Q86VQ3 553 aa8.06□□□□□ -1.12
RN7SKP288-201ENST00000516227 PRAM1Q96QH2 718 aa8.06□□□□□ -1.12
RN7SKP288-201ENST00000516227 LRPPRCP42704 1394 aaKnown RBP8.06□□□□□ -1.12
RN7SKP288-201ENST00000516227 THEMISQ8N1K5 641 aaPredicted RBP8.05□□□□□ -1.12
RN7SKP288-201ENST00000516227 CABP2Q9NPB3 220 aa8.05□□□□□ -1.12
RN7SKP288-201ENST00000516227 FMN2Q9NZ56 1722 aa8.05□□□□□ -1.12
RN7SKP288-201ENST00000516227 DLG5Q8TDM6 1919 aa8.05□□□□□ -1.12
RN7SKP288-201ENST00000516227 SHPRHQ149N8 1683 aa8.05□□□□□ -1.12
RN7SKP288-201ENST00000516227 TOPAZ1Q8N9V7 1692 aa8.05□□□□□ -1.12
RN7SKP288-201ENST00000516227 XRN1Q8IZH2 1706 aaKnown RBP8.04□□□□□ -1.12
RN7SKP288-201ENST00000516227 NLRP13Q86W25 1043 aa8.04□□□□□ -1.12
RN7SKP288-201ENST00000516227 PLEKHG1Q9ULL1 1385 aa8.04□□□□□ -1.12
RN7SKP288-201ENST00000516227 ARHGAP23Q9P227 1491 aa8.04□□□□□ -1.12
RN7SKP288-201ENST00000516227 NSD3Q9BZ95 1437 aa8.03□□□□□ -1.12
RN7SKP288-201ENST00000516227 NALCNQ8IZF0 1738 aa8.03□□□□□ -1.12
RN7SKP288-201ENST00000516227 METP08581 1390 aa8.03□□□□□ -1.12
RN7SKP288-201ENST00000516227 LTKP29376 864 aa8.03□□□□□ -1.12
RN7SKP288-201ENST00000516227 WAPLQ7Z5K2 1190 aa8.03□□□□□ -1.12
RN7SKP288-201ENST00000516227 CDK19Q9BWU1 502 aa8.03□□□□□ -1.12
RN7SKP288-201ENST00000516227 SLC12A5Q9H2X9 1139 aa8.03□□□□□ -1.12
RN7SKP288-201ENST00000516227 VIRMAQ69YN4 1812 aaKnown RBP8.03□□□□□ -1.12
RN7SKP288-201ENST00000516227 ADGRB2O60241 1585 aa8.02□□□□□ -1.13
RN7SKP288-201ENST00000516227 ATAD2Q6PL18 1390 aa8.02□□□□□ -1.13
RN7SKP288-201ENST00000516227 ABCC11Q96J66 1382 aa8.02□□□□□ -1.13
RN7SKP288-201ENST00000516227 PUS7Q96PZ0 661 aaKnown RBP8.02□□□□□ -1.13
RN7SKP288-201ENST00000516227 ADAMTS13Q76LX8 1427 aa8.02□□□□□ -1.13
RN7SKP288-201ENST00000516227 ANKRD36BQ8N2N9 1353 aa8.01□□□□□ -1.13
RN7SKP288-201ENST00000516227 NPC1L1Q9UHC9 1359 aa8.01□□□□□ -1.13
RN7SKP288-201ENST00000516227 PLEKHH1Q9ULM0 1364 aa8.01□□□□□ -1.13
RN7SKP288-201ENST00000516227 PPP2R1AP30153 589 aa8.01□□□□□ -1.13
RN7SKP288-201ENST00000516227 AMER1Q5JTC6 1135 aaPredicted RBP8.01□□□□□ -1.13
RN7SKP288-201ENST00000516227 PNISRQ8TF01 805 aaKnown RBP8.01□□□□□ -1.13
RN7SKP288-201ENST00000516227 SLC26A8Q96RN1 970 aa8.01□□□□□ -1.13
RN7SKP288-201ENST00000516227 NINLQ9Y2I6 1382 aa8□□□□□ -1.13
RN7SKP288-201ENST00000516227 HDGFL2Q7Z4V5 671 aaPredicted RBP8□□□□□ -1.13
RN7SKP288-201ENST00000516227 MORC1Q86VD1 984 aa8□□□□□ -1.13
RN7SKP288-201ENST00000516227 CARD14Q9BXL6 1004 aa8□□□□□ -1.13
RN7SKP288-201ENST00000516227 TERF2IPQ9NYB0 399 aa8□□□□□ -1.13
RN7SKP288-201ENST00000516227 FAM135BQ49AJ0 1406 aa8□□□□□ -1.13
RN7SKP288-201ENST00000516227 CDC42BPGQ6DT37 1551 aa8□□□□□ -1.13
RN7SKP288-201ENST00000516227 CGNL1Q0VF96 1302 aa8□□□□□ -1.13
RN7SKP288-201ENST00000516227 LTN1O94822 1766 aa7.99□□□□□ -1.13
RN7SKP288-201ENST00000516227 SENP3-EIF4A1A0A087X0R7 540 aa7.99□□□□□ -1.13
RN7SKP288-201ENST00000516227 TECPR2O15040 1411 aa7.99□□□□□ -1.13
RN7SKP288-201ENST00000516227 WDR43Q15061 677 aaKnown RBP eCLIP7.99□□□□□ -1.13
RN7SKP288-201ENST00000516227 MED14O60244 1454 aa7.99□□□□□ -1.13
RN7SKP288-201ENST00000516227 ZBED9Q6R2W3 1325 aa7.99□□□□□ -1.13
RN7SKP288-201ENST00000516227 A0A1W2PP64 1363 aa7.98□□□□□ -1.13
RN7SKP288-201ENST00000516227 NRKQ7Z2Y5 1582 aa7.98□□□□□ -1.13
RN7SKP288-201ENST00000516227 PPIP5K1Q6PFW1 1433 aa7.98□□□□□ -1.13
RN7SKP288-201ENST00000516227 STRCP1A6NGW2 1772 aa7.98□□□□□ -1.13
RN7SKP288-201ENST00000516227 WASLO00401 505 aaPredicted RBP7.98□□□□□ -1.13
RN7SKP288-201ENST00000516227 NEFLP07196 543 aa7.98□□□□□ -1.13
RN7SKP288-201ENST00000516227 TNNT2P45379 298 aaPredicted RBP7.98□□□□□ -1.13
RN7SKP288-201ENST00000516227 ANKLE2Q86XL3 938 aa7.98□□□□□ -1.13
RN7SKP288-201ENST00000516227 SIRT1Q96EB6 747 aa7.98□□□□□ -1.13
RN7SKP288-201ENST00000516227 AMOTL2Q9Y2J4 779 aa7.98□□□□□ -1.13
RN7SKP288-201ENST00000516227 ATP7BP35670 1465 aa7.98□□□□□ -1.13
RN7SKP288-201ENST00000516227 PTPRUQ92729 1446 aa7.97□□□□□ -1.13
RN7SKP288-201ENST00000516227 XIRP1Q702N8 1843 aaKnown RBP7.97□□□□□ -1.13
RN7SKP288-201ENST00000516227 CABP1Q9NZU7 370 aa7.97□□□□□ -1.13
RN7SKP288-201ENST00000516227 TBX22Q9Y458 520 aa7.97□□□□□ -1.13
RN7SKP288-201ENST00000516227 SALL2Q9Y467 1007 aaPredicted RBP7.97□□□□□ -1.13
RN7SKP288-201ENST00000516227 RGPD5Q99666 1765 aa7.97□□□□□ -1.13
RN7SKP288-201ENST00000516227 NSD2O96028 1365 aa7.97□□□□□ -1.13
RN7SKP288-201ENST00000516227 ROBO2Q9HCK4 1378 aa7.97□□□□□ -1.13
RN7SKP288-201ENST00000516227 CD163L1Q9NR16 1453 aa7.96□□□□□ -1.13
RN7SKP288-201ENST00000516227 NUDT16Q96DE0 195 aaKnown RBP7.96□□□□□ -1.14
RN7SKP288-201ENST00000516227 MARF1Q9Y4F3 1742 aaKnown RBP7.95□□□□□ -1.14
RN7SKP288-201ENST00000516227 RGPD2P0DJD1 1756 aa7.95□□□□□ -1.14
RN7SKP288-201ENST00000516227 NUTM2FA1L443 756 aa7.95□□□□□ -1.14
RN7SKP288-201ENST00000516227 CFAP53Q96M91 514 aa7.95□□□□□ -1.14
RN7SKP288-201ENST00000516227 PHF23Q9BUL5 403 aaPredicted RBP7.95□□□□□ -1.14
RN7SKP288-201ENST00000516227 BLMP54132 1417 aaPredicted RBP7.95□□□□□ -1.14
RN7SKP288-201ENST00000516227 STRCQ7RTU9 1775 aa7.94□□□□□ -1.14
RN7SKP288-201ENST00000516227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.94□□□□□ -1.14
RN7SKP288-201ENST00000516227 GGNBP2Q9H3C7 697 aa7.94□□□□□ -1.14
RN7SKP288-201ENST00000516227 NPHP4O75161 1426 aaPredicted RBP7.94□□□□□ -1.14
RN7SKP288-201ENST00000516227 PTCH1Q13635 1447 aa7.94□□□□□ -1.14
RN7SKP288-201ENST00000516227 FKBP8Q14318 412 aa7.93□□□□□ -1.14
RN7SKP288-201ENST00000516227 ADAMTS8Q9UP79 889 aa7.93□□□□□ -1.14
RN7SKP288-201ENST00000516227 SUPT16HQ9Y5B9 1047 aaKnown RBP7.93□□□□□ -1.14
RN7SKP288-201ENST00000516227 PIK3R4Q99570 1358 aa7.93□□□□□ -1.14
RN7SKP288-201ENST00000516227 EDC4Q6P2E9 1401 aaKnown RBP7.93□□□□□ -1.14
RN7SKP288-201ENST00000516227 PIK3C2AO00443 1686 aa7.92□□□□□ -1.14
RN7SKP288-201ENST00000516227 MTHFSP49914 203 aa7.92□□□□□ -1.14
RN7SKP288-201ENST00000516227 CCDC61Q9Y6R9 512 aa7.92□□□□□ -1.14
RN7SKP288-201ENST00000516227 NCKAP5LQ9HCH0 1330 aa7.92□□□□□ -1.14
RN7SKP288-201ENST00000516227 POLR3AO14802 1390 aaPredicted RBP7.92□□□□□ -1.14
RN7SKP288-201ENST00000516227 INSRP06213 1382 aa7.92□□□□□ -1.14
RN7SKP288-201ENST00000516227 NWD1Q149M9 1564 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms