RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 CFAP99D6REC4 459 aa7.41□□□□□ -1.22
HERC6-208ENST00000515365 GPR37L1O60883 481 aa7.41□□□□□ -1.22
HERC6-208ENST00000515365 HELBQ8NG08 1087 aaPredicted RBP7.41□□□□□ -1.22
HERC6-208ENST00000515365 GLMNQ92990 594 aa7.41□□□□□ -1.22
HERC6-208ENST00000515365 CALR3Q96L12 384 aaKnown RBP7.41□□□□□ -1.22
HERC6-208ENST00000515365 BHMG1C9JSJ3 638 aaPredicted RBP7.39□□□□□ -1.23
HERC6-208ENST00000515365 C6orf229H3BNL8 230 aa7.39□□□□□ -1.23
HERC6-208ENST00000515365 ATP6V1AP38606 617 aa7.39□□□□□ -1.23
HERC6-208ENST00000515365 ZNF687Q8N1G0 1237 aa7.39□□□□□ -1.23
HERC6-208ENST00000515365 LRRN4Q8WUT4 740 aa7.39□□□□□ -1.23
HERC6-208ENST00000515365 NBPF3Q9H094 633 aa7.39□□□□□ -1.23
HERC6-208ENST00000515365 ST18O60284 1047 aa7.38□□□□□ -1.23
HERC6-208ENST00000515365 EMP3P54852 163 aa7.38□□□□□ -1.23
HERC6-208ENST00000515365 TRAIPQ9BWF2 469 aa7.38□□□□□ -1.23
HERC6-208ENST00000515365 WASHC4Q2M389 1173 aa7.37□□□□□ -1.23
HERC6-208ENST00000515365 ADAMTS19Q8TE59 1207 aa7.37□□□□□ -1.23
HERC6-208ENST00000515365 TSC1Q92574 1164 aa7.37□□□□□ -1.23
HERC6-208ENST00000515365 ZFRQ96KR1 1074 aaKnown RBP7.37□□□□□ -1.23
HERC6-208ENST00000515365 TK2O00142 265 aa7.36□□□□□ -1.23
HERC6-208ENST00000515365 RNF40O75150 1001 aa7.36□□□□□ -1.23
HERC6-208ENST00000515365 PPP1R15AO75807 674 aaPredicted RBP7.36□□□□□ -1.23
HERC6-208ENST00000515365 KMT5BQ4FZB7 885 aa7.36□□□□□ -1.23
HERC6-208ENST00000515365 PRR7Q8TB68 274 aa7.36□□□□□ -1.23
HERC6-208ENST00000515365 SYMPKQ92797 1274 aaKnown RBP7.36□□□□□ -1.23
HERC6-208ENST00000515365 MORN1Q5T089 497 aa7.35□□□□□ -1.23
HERC6-208ENST00000515365 HDGFL1Q5TGJ6 251 aa7.35□□□□□ -1.23
HERC6-208ENST00000515365 EPS8L1Q8TE68 723 aa7.35□□□□□ -1.23
HERC6-208ENST00000515365 NECTIN2Q92692 538 aa7.35□□□□□ -1.23
HERC6-208ENST00000515365 MARVELD3Q96A59 401 aa7.35□□□□□ -1.23
HERC6-208ENST00000515365 ZBTB7CA1YPR0 619 aa7.34□□□□□ -1.23
HERC6-208ENST00000515365 ACTN4O43707 911 aaKnown RBP7.34□□□□□ -1.23
HERC6-208ENST00000515365 RETREG3Q86VR2 466 aa7.34□□□□□ -1.23
HERC6-208ENST00000515365 RETREG2Q8NC44 543 aa7.34□□□□□ -1.23
HERC6-208ENST00000515365 FAM205CA6NFA0 338 aa7.33□□□□□ -1.24
HERC6-208ENST00000515365 PER1O15534 1290 aaPredicted RBP7.33□□□□□ -1.24
HERC6-208ENST00000515365 VAC14Q08AM6 782 aa7.33□□□□□ -1.24
HERC6-208ENST00000515365 MRPL50Q8N5N7 158 aaKnown RBP7.33□□□□□ -1.24
HERC6-208ENST00000515365 SLC27A5Q9Y2P5 690 aa7.33□□□□□ -1.24
HERC6-208ENST00000515365 Q3C1V9 767 aa7.32□□□□□ -1.24
HERC6-208ENST00000515365 PUS10Q3MIT2 529 aaKnown RBP7.32□□□□□ -1.24
HERC6-208ENST00000515365 LHX8Q68G74 356 aa7.32□□□□□ -1.24
HERC6-208ENST00000515365 DESI1Q6ICB0 168 aa7.32□□□□□ -1.24
HERC6-208ENST00000515365 LRCH3Q96II8 777 aa7.32□□□□□ -1.24
HERC6-208ENST00000515365 ALG2Q9H553 416 aa7.32□□□□□ -1.24
HERC6-208ENST00000515365 POTEB3A0JP26 581 aa7.31□□□□□ -1.24
HERC6-208ENST00000515365 NR6A1Q15406 480 aa7.31□□□□□ -1.24
HERC6-208ENST00000515365 ADGRD1Q6QNK2 874 aa7.31□□□□□ -1.24
HERC6-208ENST00000515365 POTEBQ6S5H4 581 aa7.31□□□□□ -1.24
HERC6-208ENST00000515365 PRR14Q9BWN1 585 aa7.31□□□□□ -1.24
HERC6-208ENST00000515365 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.31□□□□□ -1.24
HERC6-208ENST00000515365 HRO43593 1189 aa7.3□□□□□ -1.24
HERC6-208ENST00000515365 CFAP70Q5T0N1 1121 aa7.3□□□□□ -1.24
HERC6-208ENST00000515365 KCTD17Q8N5Z5 321 aa7.3□□□□□ -1.24
HERC6-208ENST00000515365 HS3ST6Q96QI5 342 aa7.3□□□□□ -1.24
HERC6-208ENST00000515365 SOX11P35716 441 aa7.29□□□□□ -1.24
HERC6-208ENST00000515365 LSM11P83369 360 aaKnown RBP eCLIP7.29□□□□□ -1.24
HERC6-208ENST00000515365 LYPD8Q6UX82 237 aa7.29□□□□□ -1.24
HERC6-208ENST00000515365 PBXIP1Q96AQ6 731 aa7.29□□□□□ -1.24
HERC6-208ENST00000515365 ACIN1Q9UKV3 1341 aaKnown RBP7.28□□□□□ -1.24
HERC6-208ENST00000515365 SRPK2P78362 688 aaKnown RBP7.28□□□□□ -1.24
HERC6-208ENST00000515365 BLOC1S3Q6QNY0 202 aa7.28□□□□□ -1.24
HERC6-208ENST00000515365 RNF19BQ6ZMZ0 732 aa7.28□□□□□ -1.24
HERC6-208ENST00000515365 PPP1R12CQ9BZL4 782 aa7.28□□□□□ -1.24
HERC6-208ENST00000515365 SALL2Q9Y467 1007 aaPredicted RBP7.28□□□□□ -1.24
HERC6-208ENST00000515365 BRICD5Q6PL45 260 aa7.27□□□□□ -1.25
HERC6-208ENST00000515365 ANKK1Q8NFD2 765 aa7.27□□□□□ -1.25
HERC6-208ENST00000515365 UCN2Q96RP3 112 aa7.27□□□□□ -1.25
HERC6-208ENST00000515365 USB1Q9BQ65 265 aaKnown RBP7.27□□□□□ -1.25
HERC6-208ENST00000515365 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.26□□□□□ -1.25
HERC6-208ENST00000515365 PALM3A6NDB9 673 aaPredicted RBP7.26□□□□□ -1.25
HERC6-208ENST00000515365 SOWAHBA6NEL2 793 aa7.26□□□□□ -1.25
HERC6-208ENST00000515365 PNMA1Q8ND90 353 aa7.26□□□□□ -1.25
HERC6-208ENST00000515365 RFX1P22670 979 aa7.25□□□□□ -1.25
HERC6-208ENST00000515365 APLP1P51693 650 aa7.25□□□□□ -1.25
HERC6-208ENST00000515365 PPP4CP60510 307 aa7.25□□□□□ -1.25
HERC6-208ENST00000515365 PDE4CQ08493 712 aa7.25□□□□□ -1.25
HERC6-208ENST00000515365 THAP11Q96EK4 314 aa7.25□□□□□ -1.25
HERC6-208ENST00000515365 HPS5Q9UPZ3 1129 aa7.25□□□□□ -1.25
HERC6-208ENST00000515365 F12P00748 615 aaPredicted RBP7.24□□□□□ -1.25
HERC6-208ENST00000515365 NR1H3Q13133 447 aa7.24□□□□□ -1.25
HERC6-208ENST00000515365 SEMA3FQ13275 785 aa7.24□□□□□ -1.25
HERC6-208ENST00000515365 AEBP1Q8IUX7 1158 aa7.24□□□□□ -1.25
HERC6-208ENST00000515365 SCUBE3Q8IX30 993 aa7.24□□□□□ -1.25
HERC6-208ENST00000515365 TSR3Q9UJK0 312 aaKnown RBP7.24□□□□□ -1.25
HERC6-208ENST00000515365 GOLGA8CPA6NN73 597 aa7.23□□□□□ -1.25
HERC6-208ENST00000515365 NR1I2O75469 434 aa7.23□□□□□ -1.25
HERC6-208ENST00000515365 FMNL1O95466 1100 aaPredicted RBP7.23□□□□□ -1.25
HERC6-208ENST00000515365 LMOD1P29536 600 aaPredicted RBP7.23□□□□□ -1.25
HERC6-208ENST00000515365 BCAMP50895 628 aa7.23□□□□□ -1.25
HERC6-208ENST00000515365 EIF4G2P78344 907 aaKnown RBP eCLIP7.23□□□□□ -1.25
HERC6-208ENST00000515365 FAM163AQ96GL9 167 aaPredicted RBP7.23□□□□□ -1.25
HERC6-208ENST00000515365 TFIP11Q9UBB9 837 aaKnown RBP7.23□□□□□ -1.25
HERC6-208ENST00000515365 FKBPLQ9UIM3 349 aa7.23□□□□□ -1.25
HERC6-208ENST00000515365 USTQ9Y2C2 406 aa7.23□□□□□ -1.25
HERC6-208ENST00000515365 CCDC9Q9Y3X0 531 aaKnown RBP7.23□□□□□ -1.25
HERC6-208ENST00000515365 PCDHB3Q9Y5E6 796 aa7.23□□□□□ -1.25
HERC6-208ENST00000515365 FBXO45P0C2W1 286 aa7.22□□□□□ -1.25
HERC6-208ENST00000515365 JUNDP17535 347 aa7.22□□□□□ -1.25
HERC6-208ENST00000515365 PTPRNQ16849 979 aa7.22□□□□□ -1.25
HERC6-208ENST00000515365 ZC3H4Q9UPT8 1303 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms