RNA–Protein interactions for RNA: ENST00000513597.5

RUFY3-212, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-212ENST00000513597 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
RUFY3-212ENST00000513597 PODXL2Q9NZ53 605 aa11.71□□□□□ -0.53
RUFY3-212ENST00000513597 CFAP99D6REC4 459 aa11.7□□□□□ -0.54
RUFY3-212ENST00000513597 HMX1Q9NP08 348 aaPredicted RBP11.7□□□□□ -0.54
RUFY3-212ENST00000513597 POM121CA8CG34 1229 aa11.69□□□□□ -0.54
RUFY3-212ENST00000513597 CFHP08603 1231 aa11.69□□□□□ -0.54
RUFY3-212ENST00000513597 HELBQ8NG08 1087 aaPredicted RBP11.69□□□□□ -0.54
RUFY3-212ENST00000513597 NBPF3Q9H094 633 aa11.69□□□□□ -0.54
RUFY3-212ENST00000513597 WASHC4Q2M389 1173 aa11.67□□□□□ -0.54
RUFY3-212ENST00000513597 GLMNQ92990 594 aa11.67□□□□□ -0.54
RUFY3-212ENST00000513597 ZFRQ96KR1 1074 aaKnown RBP11.67□□□□□ -0.54
RUFY3-212ENST00000513597 CALR3Q96L12 384 aaKnown RBP11.67□□□□□ -0.54
RUFY3-212ENST00000513597 TRAIPQ9BWF2 469 aa11.67□□□□□ -0.54
RUFY3-212ENST00000513597 PPP1R15AO75807 674 aaPredicted RBP11.66□□□□□ -0.54
RUFY3-212ENST00000513597 LRRN4Q8WUT4 740 aa11.66□□□□□ -0.54
RUFY3-212ENST00000513597 C6orf229H3BNL8 230 aa11.65□□□□□ -0.54
RUFY3-212ENST00000513597 EMP3P54852 163 aa11.65□□□□□ -0.54
RUFY3-212ENST00000513597 NECTIN2Q92692 538 aa11.65□□□□□ -0.54
RUFY3-212ENST00000513597 MORN1Q5T089 497 aa11.64□□□□□ -0.55
RUFY3-212ENST00000513597 LHX8Q68G74 356 aa11.64□□□□□ -0.55
RUFY3-212ENST00000513597 DESI1Q6ICB0 168 aa11.64□□□□□ -0.55
RUFY3-212ENST00000513597 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
RUFY3-212ENST00000513597 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
RUFY3-212ENST00000513597 ADAMTS19Q8TE59 1207 aa11.63□□□□□ -0.55
RUFY3-212ENST00000513597 HDGFL1Q5TGJ6 251 aa11.61□□□□□ -0.55
RUFY3-212ENST00000513597 RETREG3Q86VR2 466 aa11.61□□□□□ -0.55
RUFY3-212ENST00000513597 PRR7Q8TB68 274 aa11.61□□□□□ -0.55
RUFY3-212ENST00000513597 SYMPKQ92797 1274 aaKnown RBP11.61□□□□□ -0.55
RUFY3-212ENST00000513597 POTEB3A0JP26 581 aa11.6□□□□□ -0.55
RUFY3-212ENST00000513597 FAM205CA6NFA0 338 aa11.6□□□□□ -0.55
RUFY3-212ENST00000513597 HRO43593 1189 aa11.6□□□□□ -0.55
RUFY3-212ENST00000513597 POTEBQ6S5H4 581 aa11.6□□□□□ -0.55
RUFY3-212ENST00000513597 EPS8L1Q8TE68 723 aa11.6□□□□□ -0.55
RUFY3-212ENST00000513597 MARVELD3Q96A59 401 aa11.6□□□□□ -0.55
RUFY3-212ENST00000513597 Q3C1V9 767 aa11.59□□□□□ -0.55
RUFY3-212ENST00000513597 MRPL50Q8N5N7 158 aaKnown RBP11.59□□□□□ -0.55
RUFY3-212ENST00000513597 ALG2Q9H553 416 aa11.59□□□□□ -0.55
RUFY3-212ENST00000513597 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
RUFY3-212ENST00000513597 SLC27A5Q9Y2P5 690 aa11.58□□□□□ -0.56
RUFY3-212ENST00000513597 PER1O15534 1290 aaPredicted RBP11.57□□□□□ -0.56
RUFY3-212ENST00000513597 SRPK2P78362 688 aaKnown RBP11.57□□□□□ -0.56
RUFY3-212ENST00000513597 ADGRD1Q6QNK2 874 aa11.57□□□□□ -0.56
RUFY3-212ENST00000513597 TSC1Q92574 1164 aa11.57□□□□□ -0.56
RUFY3-212ENST00000513597 LRCH3Q96II8 777 aa11.57□□□□□ -0.56
RUFY3-212ENST00000513597 PRR14Q9BWN1 585 aa11.57□□□□□ -0.56
RUFY3-212ENST00000513597 LYPD8Q6UX82 237 aa11.56□□□□□ -0.56
RUFY3-212ENST00000513597 HS3ST6Q96QI5 342 aa11.56□□□□□ -0.56
RUFY3-212ENST00000513597 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.56□□□□□ -0.56
RUFY3-212ENST00000513597 LSM11P83369 360 aaKnown RBP eCLIP11.55□□□□□ -0.56
RUFY3-212ENST00000513597 RETREG2Q8NC44 543 aa11.55□□□□□ -0.56
RUFY3-212ENST00000513597 RNF40O75150 1001 aa11.54□□□□□ -0.56
RUFY3-212ENST00000513597 SOX11P35716 441 aa11.54□□□□□ -0.56
RUFY3-212ENST00000513597 VAC14Q08AM6 782 aa11.54□□□□□ -0.56
RUFY3-212ENST00000513597 NR6A1Q15406 480 aa11.54□□□□□ -0.56
RUFY3-212ENST00000513597 PUS10Q3MIT2 529 aaKnown RBP11.54□□□□□ -0.56
RUFY3-212ENST00000513597 CFAP70Q5T0N1 1121 aa11.54□□□□□ -0.56
RUFY3-212ENST00000513597 ZBTB7CA1YPR0 619 aa11.53□□□□□ -0.56
RUFY3-212ENST00000513597 BRICD5Q6PL45 260 aa11.53□□□□□ -0.56
RUFY3-212ENST00000513597 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
RUFY3-212ENST00000513597 ACIN1Q9UKV3 1341 aaKnown RBP11.53□□□□□ -0.56
RUFY3-212ENST00000513597 PBXIP1Q96AQ6 731 aa11.52□□□□□ -0.57
RUFY3-212ENST00000513597 PPP1R12CQ9BZL4 782 aa11.52□□□□□ -0.57
RUFY3-212ENST00000513597 SOWAHBA6NEL2 793 aa11.51□□□□□ -0.57
RUFY3-212ENST00000513597 THAP11Q96EK4 314 aa11.51□□□□□ -0.57
RUFY3-212ENST00000513597 BLOC1S3Q6QNY0 202 aa11.5□□□□□ -0.57
RUFY3-212ENST00000513597 USB1Q9BQ65 265 aaKnown RBP11.5□□□□□ -0.57
RUFY3-212ENST00000513597 PDE4CQ08493 712 aa11.49□□□□□ -0.57
RUFY3-212ENST00000513597 RNF19BQ6ZMZ0 732 aa11.49□□□□□ -0.57
RUFY3-212ENST00000513597 SCUBE3Q8IX30 993 aa11.48□□□□□ -0.57
RUFY3-212ENST00000513597 ANKK1Q8NFD2 765 aa11.48□□□□□ -0.57
RUFY3-212ENST00000513597 F12P00748 615 aaPredicted RBP11.47□□□□□ -0.57
RUFY3-212ENST00000513597 APLP1P51693 650 aa11.47□□□□□ -0.57
RUFY3-212ENST00000513597 PPP4CP60510 307 aa11.47□□□□□ -0.57
RUFY3-212ENST00000513597 UCN2Q96RP3 112 aa11.47□□□□□ -0.57
RUFY3-212ENST00000513597 TSR3Q9UJK0 312 aaKnown RBP11.47□□□□□ -0.57
RUFY3-212ENST00000513597 PALM3A6NDB9 673 aaPredicted RBP11.46□□□□□ -0.57
RUFY3-212ENST00000513597 PNMA1Q8ND90 353 aa11.46□□□□□ -0.57
RUFY3-212ENST00000513597 LCE2DQ5TA82 110 aaPredicted RBP11.45□□□□□ -0.58
RUFY3-212ENST00000513597 FMNL1O95466 1100 aaPredicted RBP11.44□□□□□ -0.58
RUFY3-212ENST00000513597 FAM163AQ96GL9 167 aaPredicted RBP11.44□□□□□ -0.58
RUFY3-212ENST00000513597 HPS5Q9UPZ3 1129 aa11.44□□□□□ -0.58
RUFY3-212ENST00000513597 NR1I2O75469 434 aa11.43□□□□□ -0.58
RUFY3-212ENST00000513597 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.58
RUFY3-212ENST00000513597 NR1H3Q13133 447 aa11.43□□□□□ -0.58
RUFY3-212ENST00000513597 PTPRNQ16849 979 aa11.43□□□□□ -0.58
RUFY3-212ENST00000513597 TFIP11Q9UBB9 837 aaKnown RBP11.43□□□□□ -0.58
RUFY3-212ENST00000513597 ZC3H4Q9UPT8 1303 aaKnown RBP11.42□□□□□ -0.58
RUFY3-212ENST00000513597 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.42□□□□□ -0.58
RUFY3-212ENST00000513597 JUNDP17535 347 aa11.42□□□□□ -0.58
RUFY3-212ENST00000513597 SEMA3FQ13275 785 aa11.42□□□□□ -0.58
RUFY3-212ENST00000513597 FKBPLQ9UIM3 349 aa11.42□□□□□ -0.58
RUFY3-212ENST00000513597 PCDHB3Q9Y5E6 796 aa11.42□□□□□ -0.58
RUFY3-212ENST00000513597 GOLGA8CPA6NN73 597 aa11.41□□□□□ -0.58
RUFY3-212ENST00000513597 BCAMP50895 628 aa11.41□□□□□ -0.58
RUFY3-212ENST00000513597 USTQ9Y2C2 406 aa11.41□□□□□ -0.58
RUFY3-212ENST00000513597 RFX1P22670 979 aa11.4□□□□□ -0.58
RUFY3-212ENST00000513597 MSS51Q4VC12 460 aa11.4□□□□□ -0.58
RUFY3-212ENST00000513597 ZBBXA8MT70 800 aa11.39□□□□□ -0.59
RUFY3-212ENST00000513597 LMOD1P29536 600 aaPredicted RBP11.39□□□□□ -0.59
RUFY3-212ENST00000513597 WNT2BQ93097 391 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms