RNA–Protein interactions for RNA: ENST00000513597.5

RUFY3-212, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-212ENST00000513597 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
RUFY3-212ENST00000513597 AEBP2Q6ZN18 517 aaPredicted RBP26.22■■□□□ 1.79
RUFY3-212ENST00000513597 PHF23Q9BUL5 403 aaPredicted RBP23.25■■□□□ 1.31
RUFY3-212ENST00000513597 SENP3Q9H4L4 574 aaPredicted RBP22.09■■□□□ 1.13
RUFY3-212ENST00000513597 PLPPR3Q6T4P5 718 aa21.68■■□□□ 1.06
RUFY3-212ENST00000513597 FOXD1Q16676 465 aa20.43■□□□□ 0.86
RUFY3-212ENST00000513597 ADRA2BP18089 450 aa20.27■□□□□ 0.84
RUFY3-212ENST00000513597 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
RUFY3-212ENST00000513597 KCNA4P22459 653 aa19.56■□□□□ 0.72
RUFY3-212ENST00000513597 PIAS4Q8N2W9 510 aaPredicted RBP19.36■□□□□ 0.69
RUFY3-212ENST00000513597 PPP4R3CPQ6ZMV5 832 aa19.19■□□□□ 0.66
RUFY3-212ENST00000513597 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
RUFY3-212ENST00000513597 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
RUFY3-212ENST00000513597 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
RUFY3-212ENST00000513597 NPM3O75607 178 aaKnown RBP18.64■□□□□ 0.57
RUFY3-212ENST00000513597 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
RUFY3-212ENST00000513597 MSH5O43196 834 aa18.53■□□□□ 0.56
RUFY3-212ENST00000513597 SCAF1Q9H7N4 1312 aaKnown RBP18.51■□□□□ 0.55
RUFY3-212ENST00000513597 CNKSR2Q8WXI2 1034 aa18.51■□□□□ 0.55
RUFY3-212ENST00000513597 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
RUFY3-212ENST00000513597 MAPK8IP2Q13387 824 aaPredicted RBP18.14■□□□□ 0.49
RUFY3-212ENST00000513597 ZBTB22O15209 634 aa18.05■□□□□ 0.48
RUFY3-212ENST00000513597 RNF216Q9NWF9 866 aaPredicted RBP17.99■□□□□ 0.47
RUFY3-212ENST00000513597 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
RUFY3-212ENST00000513597 DMRT2Q9Y5R5 561 aa17.79■□□□□ 0.44
RUFY3-212ENST00000513597 HOXD11P31277 338 aaPredicted RBP17.76■□□□□ 0.43
RUFY3-212ENST00000513597 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
RUFY3-212ENST00000513597 ATXN8OSP0DMR3 200 aa17.2■□□□□ 0.34
RUFY3-212ENST00000513597 MYCNP04198 464 aaPredicted RBP17.18■□□□□ 0.34
RUFY3-212ENST00000513597 DCAF8L1A6NGE4 600 aa16.77■□□□□ 0.28
RUFY3-212ENST00000513597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.27
RUFY3-212ENST00000513597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
RUFY3-212ENST00000513597 HNRNPUL2Q1KMD3 747 aaKnown RBP16.69■□□□□ 0.26
RUFY3-212ENST00000513597 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
RUFY3-212ENST00000513597 U3KPZ7 1027 aaPredicted RBP16.67■□□□□ 0.26
RUFY3-212ENST00000513597 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
RUFY3-212ENST00000513597 FKBP8Q14318 412 aa16.64■□□□□ 0.25
RUFY3-212ENST00000513597 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
RUFY3-212ENST00000513597 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
RUFY3-212ENST00000513597 APLP2Q06481 763 aa16.32■□□□□ 0.2
RUFY3-212ENST00000513597 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
RUFY3-212ENST00000513597 SLC24A1O60721 1099 aa16.07■□□□□ 0.16
RUFY3-212ENST00000513597 MKRN4PQ13434 485 aaPredicted RBP16.02■□□□□ 0.16
RUFY3-212ENST00000513597 RNF39Q9H2S5 420 aa15.99■□□□□ 0.15
RUFY3-212ENST00000513597 SPDYE4A6NLX3 237 aa15.96■□□□□ 0.15
RUFY3-212ENST00000513597 PROM2Q8N271 834 aa15.95■□□□□ 0.14
RUFY3-212ENST00000513597 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
RUFY3-212ENST00000513597 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
RUFY3-212ENST00000513597 FBXO3Q9UK99 471 aa15.9■□□□□ 0.14
RUFY3-212ENST00000513597 TRHP20396 242 aaPredicted RBP15.87■□□□□ 0.13
RUFY3-212ENST00000513597 FBLN2P98095 1184 aa15.87■□□□□ 0.13
RUFY3-212ENST00000513597 POLA2Q14181 598 aa15.86■□□□□ 0.13
RUFY3-212ENST00000513597 C1QBPQ07021 282 aaKnown RBP15.83■□□□□ 0.12
RUFY3-212ENST00000513597 CAPN15O75808 1086 aa15.77■□□□□ 0.12
RUFY3-212ENST00000513597 ZBTB12Q9Y330 459 aaPredicted RBP15.66■□□□□ 0.1
RUFY3-212ENST00000513597 VASPP50552 380 aaPredicted RBP15.64■□□□□ 0.09
RUFY3-212ENST00000513597 ABCB7O75027 752 aa15.53■□□□□ 0.08
RUFY3-212ENST00000513597 IFNLR1Q8IU57 520 aaPredicted RBP15.53■□□□□ 0.08
RUFY3-212ENST00000513597 DSG3P32926 999 aa15.45■□□□□ 0.06
RUFY3-212ENST00000513597 ZNF692Q9BU19 519 aaPredicted RBP15.33■□□□□ 0.04
RUFY3-212ENST00000513597 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
RUFY3-212ENST00000513597 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
RUFY3-212ENST00000513597 SPDYE2Q495Y8 402 aa15.32■□□□□ 0.04
RUFY3-212ENST00000513597 SSUH2Q9Y2M2 353 aa15.32■□□□□ 0.04
RUFY3-212ENST00000513597 PKD2Q13563 968 aa15.31■□□□□ 0.04
RUFY3-212ENST00000513597 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
RUFY3-212ENST00000513597 OSCARQ8IYS5 282 aa15.25■□□□□ 0.03
RUFY3-212ENST00000513597 PLCB2Q00722 1185 aa15.24■□□□□ 0.03
RUFY3-212ENST00000513597 SPOCK2Q92563 424 aa15.19■□□□□ 0.02
RUFY3-212ENST00000513597 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
RUFY3-212ENST00000513597 KLHL34Q8N239 644 aa15.12■□□□□ 0.01
RUFY3-212ENST00000513597 PLCD3Q8N3E9 789 aa15.04■□□□□ -0
RUFY3-212ENST00000513597 DCAF8L2P0C7V8 631 aa15.02■□□□□ -0
RUFY3-212ENST00000513597 MIER1Q8N108 512 aa15.01□□□□□ -0.01
RUFY3-212ENST00000513597 ECM2O94769 699 aaPredicted RBP14.98□□□□□ -0.01
RUFY3-212ENST00000513597 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
RUFY3-212ENST00000513597 BBXQ8WY36 941 aaPredicted RBP14.92□□□□□ -0.02
RUFY3-212ENST00000513597 HAP1P54257 671 aaPredicted RBP14.91□□□□□ -0.02
RUFY3-212ENST00000513597 ZBTB47Q9UFB7 747 aaPredicted RBP14.89□□□□□ -0.03
RUFY3-212ENST00000513597 NPM1P06748 294 aaKnown RBP eCLIP14.88□□□□□ -0.03
RUFY3-212ENST00000513597 RGL2O15211 777 aa14.86□□□□□ -0.03
RUFY3-212ENST00000513597 VSIG10Q8N0Z9 540 aa14.85□□□□□ -0.03
RUFY3-212ENST00000513597 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
RUFY3-212ENST00000513597 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.82□□□□□ -0.04
RUFY3-212ENST00000513597 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
RUFY3-212ENST00000513597 CIZ1Q9ULV3 898 aaPredicted RBP14.74□□□□□ -0.05
RUFY3-212ENST00000513597 PAXIP1Q6ZW49 1069 aaPredicted RBP14.69□□□□□ -0.06
RUFY3-212ENST00000513597 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
RUFY3-212ENST00000513597 NUBP1P53384 320 aa14.66□□□□□ -0.06
RUFY3-212ENST00000513597 SPDYE1Q8NFV5 336 aaPredicted RBP14.66□□□□□ -0.06
RUFY3-212ENST00000513597 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
RUFY3-212ENST00000513597 BCANQ96GW7 911 aa14.65□□□□□ -0.06
RUFY3-212ENST00000513597 GSE1Q14687 1217 aa14.64□□□□□ -0.07
RUFY3-212ENST00000513597 SPRYD3Q8NCJ5 442 aa14.64□□□□□ -0.07
RUFY3-212ENST00000513597 KDM2AQ9Y2K7 1162 aa14.64□□□□□ -0.07
RUFY3-212ENST00000513597 CFAP44Q96MT7 982 aa14.62□□□□□ -0.07
RUFY3-212ENST00000513597 DNAJC5Q9H3Z4 198 aa14.61□□□□□ -0.07
RUFY3-212ENST00000513597 CHGAP10645 457 aaKnown RBP14.6□□□□□ -0.07
RUFY3-212ENST00000513597 HS6ST3Q8IZP7 471 aa14.57□□□□□ -0.08
RUFY3-212ENST00000513597 MNX1P50219 401 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 202.2 ms